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The map label for this gene is yfiY [H]

Identifier: 119867936

GI number: 119867936

Start: 2013252

End: 2014313

Strand: Reverse

Name: yfiY [H]

Synonym: Mkms_1898

Alternate gene names: 119867936

Gene position: 2014313-2013252 (Counterclockwise)

Preceding gene: 119867939

Following gene: 119867927

Centisome position: 35.11

GC content: 72.98

Gene sequence:

>1062_bases
GTGGGGACGACGGTTTCGGCGACGCTGGTCGCGGCACTCGTGGCCGCCCTGGCGGGGTGCGGGTCGACCGACGCCGACCC
CGCCGCCTCTGCGCTGATGAGCTCGGTGATCACCAGCACGACCAGTGTCGCGGGCGCGGGGGTTCTCGGTAACCAGCGCC
GACCGGACGAATCGTGCGCGGCGGGACCGGCTCCGGTCGACCCCGGGCCACCGGAGCGCGAGGTGCGCCACGCGGCCGGG
GAGACCCGGGTGACCGCCGATCCGCGGCGCATCGTGGTGCTCTCCGGTGATCAGCTCGACGCGCTGTGCGCGCTGGGGCT
GCAGTCGCGCATCGTCGCCGCCGCACTGCCCGACGGACGCGACGAACAACCGTCGTACCTCGGGTCCGTGATCCACGACG
TCGCGCCGGCGGGAACCCGTTCGGCGCCGGATGTCGACGCGATCCGCGCCGCCGCGCCGGACCTCATCCTCGGGTCACAG
GCCCTGACACCGGAGTTGTTCGATGCCCTCGGCCAGATCGCGCCGACGGTGTTCACCGGCCCGCCGGGCGCCGACTGGCA
GGCGAACCTGCGCACGGTCGGGGCCGCCACCGGGCGCTTCGACGCCACGGGCGGGCTGCTCGACGGATTCGCCGACGCCG
CCCGCAGGACCGGGCTGGACAACGACGCCGCCCATTACCAGGTGTCGGTGGTCCAGCTGACCGAGGACACCGTGCGGGTC
TACGGGGCCCGCAACTTCGCGGGCAGCGTGCTGGCCGAGGTGGGCCTGGACCGGCCTGCCGCCCAGCGCTTCACCGATGA
ACCGTTCGTCGAGATCGGCACCGGCGACTCACCGGACTACGGGATCGCCGACGCCGACATCGTGTACGTGTCGTTCGCCT
CGGCGGCCGCGCGCGAGAACGCGGCGACGATCCTCGACAGCGACGCCTGGCGTGCGTTGTCGGCCGCCCAGGACGACCGG
GTCTATGTGGTCAACAACGAGGTGTGGCAGACGGGTCAGGGTGTCGTGGCCGCCCGCGGCGTCCTGTCGGACCTGCGCTG
GGTCAACGCGCCGATCAACTAG

Upstream 100 bases:

>100_bases
TTCGGCGGCCACGCGCCTCGGCCGGGGCGGTGGTCGCGACCAGGATGTTACCGTCGGGCCCGTGCTGATCGGCCGACCGC
AGACGAGGGCCCGGACAGGG

Downstream 100 bases:

>100_bases
TCGTGCCCTGCAGCGCTTGCTGGCCGAACTGGCCGGGCGCCAGCGACCCCTCGGGCAGGACCAGTTCCCCGCTGTCGAGC
CGGCGGCGCAGATAGGCGAA

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MGTTVSATLVAALVAALAGCGSTDADPAASALMSSVITSTTSVAGAGVLGNQRRPDESCAAGPAPVDPGPPEREVRHAAG
ETRVTADPRRIVVLSGDQLDALCALGLQSRIVAAALPDGRDEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQ
ALTPELFDALGQIAPTVFTGPPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTEDTVRV
YGARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGTGDSPDYGIADADIVYVSFASAAARENAATILDSDAWRALSAAQDDR
VYVVNNEVWQTGQGVVAARGVLSDLRWVNAPIN

Sequences:

>Translated_353_residues
MGTTVSATLVAALVAALAGCGSTDADPAASALMSSVITSTTSVAGAGVLGNQRRPDESCAAGPAPVDPGPPEREVRHAAG
ETRVTADPRRIVVLSGDQLDALCALGLQSRIVAAALPDGRDEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQ
ALTPELFDALGQIAPTVFTGPPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTEDTVRV
YGARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGTGDSPDYGIADADIVYVSFASAAARENAATILDSDAWRALSAAQDDR
VYVVNNEVWQTGQGVVAARGVLSDLRWVNAPIN
>Mature_352_residues
GTTVSATLVAALVAALAGCGSTDADPAASALMSSVITSTTSVAGAGVLGNQRRPDESCAAGPAPVDPGPPEREVRHAAGE
TRVTADPRRIVVLSGDQLDALCALGLQSRIVAAALPDGRDEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQA
LTPELFDALGQIAPTVFTGPPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTEDTVRVY
GARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGTGDSPDYGIADADIVYVSFASAAARENAATILDSDAWRALSAAQDDRV
YVVNNEVWQTGQGVVAARGVLSDLRWVNAPIN

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36213; Mature: 36082

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTVSATLVAALVAALAGCGSTDADPAASALMSSVITSTTSVAGAGVLGNQRRPDESCA
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHC
AGPAPVDPGPPEREVRHAAGETRVTADPRRIVVLSGDQLDALCALGLQSRIVAAALPDGR
CCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCC
DEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQALTPELFDALGQIAPTVFTG
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCEEECC
PPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTEDTVRV
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHH
YGARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGTGDSPDYGIADADIVYVSFASAAAREN
HCCCCHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEHHHHHHHCC
AATILDSDAWRALSAAQDDRVYVVNNEVWQTGQGVVAARGVLSDLRWVNAPIN
CCEEECCHHHHHHHCCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GTTVSATLVAALVAALAGCGSTDADPAASALMSSVITSTTSVAGAGVLGNQRRPDESCA
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHC
AGPAPVDPGPPEREVRHAAGETRVTADPRRIVVLSGDQLDALCALGLQSRIVAAALPDGR
CCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCC
DEQPSYLGSVIHDVAPAGTRSAPDVDAIRAAAPDLILGSQALTPELFDALGQIAPTVFTG
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCEEECC
PPGADWQANLRTVGAATGRFDATGGLLDGFADAARRTGLDNDAAHYQVSVVQLTEDTVRV
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHH
YGARNFAGSVLAEVGLDRPAAQRFTDEPFVEIGTGDSPDYGIADADIVYVSFASAAAREN
HCCCCHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEHHHHHHHCC
AATILDSDAWRALSAAQDDRVYVVNNEVWQTGQGVVAARGVLSDLRWVNAPIN
CCEEECCHHHHHHHCCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]