| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867899
Identifier: 119867899
GI number: 119867899
Start: 1974822
End: 1975424
Strand: Reverse
Name: 119867899
Synonym: Mkms_1860
Alternate gene names: NA
Gene position: 1975424-1974822 (Counterclockwise)
Preceding gene: 119867904
Following gene: 119867898
Centisome position: 34.43
GC content: 73.3
Gene sequence:
>603_bases GTGAGCGCCCCCGACCGGTTCGCCCCGCTCCCGGTGACCGATGAGCCGCAGGAGCGTGGGGACGCCGCGCGCAACCGGCT GCTGCTGCTCGAGGCGGCGCGCCGGTTGATCGCCGAACGGGGTGCCGGCGCGGTGAGCACCGATGACATCGCGGCCGCCG CGGGCGTCGGCAAGGGCACGCTGTTCCGGCGCTTCGGGAGCCGGGCCGGTCTGATGGTGGTACTGCTCGACGAGGACGAG AAGGCCCAGCAGCAGGCCTTCCTCTTCGGGCCGCCGCCACTCGGTCCCGGCGCCCCTCCGCTGGAGCGGTTGCTGGCCTA CGGGCGGGCCCGGCACACGTTCGTCCACGACCATTACGCCCTGCTCTCGGATGCCGGGCGCGATCCGCAGACCCGCTTCA CCGGGCCGTTCCGACTGCATCACGCCCACATCCGGATGCTGCTGCAGTCGGCGGGCACCACCGGGGACCTCGATGCGCAG ACCGCCGCCCTGACCGCCCTCCTCGACGCCGACTACATCGAGCACCGTCTCGCCGACGGCGCCACGCTCGACGAGGTGGC CGACGCGTGGGAGGTCGTGGCCGTCAAGCTGTGTGGGCGGTGA
Upstream 100 bases:
>100_bases GACATGTCAGTTTCCTTTCGCGCACCATTGACGTTCTCCGACTCGCTGACAGTAACCGGACTACGGTCCGATTAATTCCG GCTGGACTACAGTCGTTGTC
Downstream 100 bases:
>100_bases GGCGTGCCGCGCTGGATCCTGCACGTCGACCTCGACCAGTTCCTCGCCTCGGTCGAGCTGCGCCGACACCCGGAACTGGC GGGGCTGCCGGTGATCGTCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGTLFRRFGSRAGLMVVLLDEDE KAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYALLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQ TAALTALLDADYIEHRLADGATLDEVADAWEVVAVKLCGR
Sequences:
>Translated_200_residues MSAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGTLFRRFGSRAGLMVVLLDEDE KAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYALLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQ TAALTALLDADYIEHRLADGATLDEVADAWEVVAVKLCGR >Mature_199_residues SAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGTLFRRFGSRAGLMVVLLDEDEK AQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYALLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQT AALTALLDADYIEHRLADGATLDEVADAWEVVAVKLCGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21524; Mature: 21392
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHH LFRRFGSRAGLMVVLLDEDEKAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYA HHHHHCCCCCEEEEEECCCCHHHHCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH LLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQTAALTALLDADYIEHRLADG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ATLDEVADAWEVVAVKLCGR CCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHH LFRRFGSRAGLMVVLLDEDEKAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYA HHHHHCCCCCEEEEEECCCCHHHHCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH LLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQTAALTALLDADYIEHRLADG HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ATLDEVADAWEVVAVKLCGR CCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA