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The map label for this gene is yagA [C]

Identifier: 119867582

GI number: 119867582

Start: 1646164

End: 1647189

Strand: Reverse

Name: yagA [C]

Synonym: Mkms_1534

Alternate gene names: 119867582

Gene position: 1647189-1646164 (Counterclockwise)

Preceding gene: 119867583

Following gene: 119867578

Centisome position: 28.71

GC content: 64.81

Gene sequence:

>1026_bases
GTGGCTTGTCTAGGTCCATACCGTCCGGAGGTTCTCGTGTCCCACCGTAATGCTCGTACGACGTTTCATGGTCGGCTGTT
GATGGTGCGCCGCCATCAGGCCGGTTGGCCCAAGGCTCATATCGCCAGTGCGATGGGGGTGTCACGCAAGTGCGTGCACA
CCTGGATCAGCCGGTTCGAGGCCGACGGCGAGGCCGGGCTGATCGACCGCTCCTCGCGGCCCCACACCTCGCCAATGCGC
ACCGCGCAGCGGCTGGAGAACCAGATCGTGGCCTGGCGGCGCCGTCACCGTTGCGGCCCGGAGGAAATCGGCGCGAAGTT
GGGGGTGTCGGCTCGGACAGTGTCCCGGGTATTGCACCGCCGTGGTGCGCCCTACCTGCGGGATTGCGATCCGATGACCG
GACAGGTCATCCGCGCCTCAAAGTCCACGGCGGTGCGTTATGAGCGCGGCCGACCCGGCGAACTGGTCCACATGGACGTT
AAGAAATTGGGCCGTATCCCTGACGGCGGTGGCTGGCGAGCCCACGGTCGAGGCTGTGCACCTGACCGCAAGCGGTTGCG
CGGCAATGGATTCGACTACATCCACTCACTTGTCGACGATCACAGCCGGCTGGCGTACTCCGAAATCCTGCCCGACGAGA
AAGGCTCCACCTGCGCCGGGTTCCTCGAACGCGCAGCCCACTACTTCCGCGCCCACGGCATCACCACCATCGAGCAGGTC
ATGACCGACAACGCCTGGGCCTACCGGTATTCCCTGCGCGATGTCTGCACCCAGCTCGGTGCCCGCCAAATCTTCATCAG
GCCCCACTGCCCCTGGCAGAACGGCAAGGTAGAGCGGCTCAACCGAACCCTGCAGACCGAATGGGCCTACAAGCGGGTCT
TCACCTCCAATGCCCACCGCGCCGCCGCGCTTGCGCCCTGGCTCAAGCACTACAACACTCAACGCCGTCACAGTGCACTC
GTGACCTGTTCCCGGTTGTCCGGACGGTTTCTGTTGGGTGTTCACGCCGCCGTGTTGGTGGTGTGA

Upstream 100 bases:

>100_bases
CACTCTGCATCGTCCGGGACGGCGACTAACTAGGTGTACCGAGACAGGACGTTGGTAGCGGGCGTGTTGGCTTGATGTGA
GGAGAACCTCCGGGTGGGGT

Downstream 100 bases:

>100_bases
AGTCTTTCGTAGTCGATGGGGCTGCGGTAGTCCAGGGCGCTGTGGCGGCGCACGGGGTTGTAGAACGCTTCGATGTACTC
GAAGATCGCTGTTGCGAGTT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; Integrase Family Protein; Integrase Catalytic Domain-Containing Protein; Transposase For ISMyma; Integrase; Transposase For Tn; Insertion Element ISCmi2 Transposase; ISBm3 Transposase Programmed; ISAca1 Transposase; Insertion Sequence Transposase Protein; Transposase ; Noncomposite Transposon Transposase; ISmav2-Like Transposase; Transposase Undefined; Insertion Element; Transposase Of; Transposase Integrase; LOW QUALITY PROTEIN Transposase ; ISBm3 Transposase Programmed Frameshift

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFEADGEAGLIDRSSRPHTSPMR
TAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHRRGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDV
KKLGRIPDGGGWRAHGRGCAPDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHRAAALAPWLKHYNTQRRHSAL
VTCSRLSGRFLLGVHAAVLVV

Sequences:

>Translated_341_residues
MACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFEADGEAGLIDRSSRPHTSPMR
TAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHRRGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDV
KKLGRIPDGGGWRAHGRGCAPDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHRAAALAPWLKHYNTQRRHSAL
VTCSRLSGRFLLGVHAAVLVV
>Mature_340_residues
ACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFEADGEAGLIDRSSRPHTSPMRT
AQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHRRGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDVK
KLGRIPDGGGWRAHGRGCAPDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQVM
TDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHRAAALAPWLKHYNTQRRHSALV
TCSRLSGRFLLGVHAAVLVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38701; Mature: 38570

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFE
CCCCCCCCCCEEEECCCCCEEECCEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHC
ADGEAGLIDRSSRPHTSPMRTAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
RGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDVKKLGRIPDGGGWRAHGRGCA
CCCCCCCCCCCCCCHHEECCCCCEEEECCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCC
PDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHR
HCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAALAPWLKHYNTQRRHSALVTCSRLSGRFLLGVHAAVLVV
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ACLGPYRPEVLVSHRNARTTFHGRLLMVRRHQAGWPKAHIASAMGVSRKCVHTWISRFE
CCCCCCCCCEEEECCCCCEEECCEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHC
ADGEAGLIDRSSRPHTSPMRTAQRLENQIVAWRRRHRCGPEEIGAKLGVSARTVSRVLHR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
RGAPYLRDCDPMTGQVIRASKSTAVRYERGRPGELVHMDVKKLGRIPDGGGWRAHGRGCA
CCCCCCCCCCCCCCHHEECCCCCEEEECCCCCCCEEEECHHHHCCCCCCCCCCCCCCCCC
PDRKRLRGNGFDYIHSLVDDHSRLAYSEILPDEKGSTCAGFLERAAHYFRAHGITTIEQV
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
MTDNAWAYRYSLRDVCTQLGARQIFIRPHCPWQNGKVERLNRTLQTEWAYKRVFTSNAHR
HCCCCCEEHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAALAPWLKHYNTQRRHSALVTCSRLSGRFLLGVHAAVLVV
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA