Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 119867578

GI number: 119867578

Start: 1641506

End: 1642744

Strand: Reverse

Name: uidR [C]

Synonym: Mkms_1530

Alternate gene names: 119867578

Gene position: 1642744-1641506 (Counterclockwise)

Preceding gene: 119867582

Following gene: 119867568

Centisome position: 28.63

GC content: 69.01

Gene sequence:

>1239_bases
ATGCCACGAGCGACCGCGGCGCGCGCCGAGACGGTGAAGGCGACTCTCCGGTCCTCTGCGCGTGGCCGCCACCGCACCGA
GCAGGTCGCGCGCGCCGCCGCCCACCTGTTCCAGGACTACGGCTACCAGAACGTGAGCATCGATCGGATCGGCGCGGCCG
TCGGTCTGACCGGGCCCGCGGTGTACCGGCACTTCAAGGGCAAGCACGACATCCTGGTGCACGCCCTGATGACTCAGGTC
CACCTCGTCGAGGAACTCCACACGGTCACCGCCGAGCAGGGCACCACCGCCCTCGAACAGTTGCAACTGCTGCTCGCCGG
CCTGGGCGACATCACCGCCAACGGGAACGAAGCCACCCTGTGGCGTCGCGAGCAGCGCCACCTCGAGGATGCCGAGCGTG
AGGTGTTCCGTCGGCACTTCGACGAGAATCAGGAACGGATCACCGCCAAGCTCCTCGCCGTCAGACCAGAAGTCGGCGAG
CACAAGGCCGAGCTGCTCGGGTTCGCCGTGCTGGCCATGTACTCCAACACCCCCAACTTCCGCGGCAACCTGTCCGCCGA
ACGACTCCAGGAGATTCAGTCGGCCGCGGCCTGGGCGATCATCGACTGCGACTTGCCCGCTCCGGCCGAGGGCGCCGGGC
CGATACCCGACCTCGGGCAACGGCAACCGGCGGGCCGGCGGGAGCGGATCATCGACGCCGCCGCCCGACTGTTCACCGAG
CGGGGTTTCTACGACGTGCACATCGACGACATCGCCAAGGCGTCGGAGATGTCGACCGCGACGCTCTACCAGCACGTGAG
CAGCAAATCCGAGGTGCTGCGGGCCGTCCTGGAACGGGGCGCCGAGGGGCTGCTCTACGTGACCTCCGACGCCCTGGCCT
ACGCGTTCACCGCGGAGCAGGCGCTCGACGCGCTCATCACCACCTATGTCCGCCAGGCGCTGGGCGTGTACGGCCGGATC
ATGCACATCCTCGCCACGGATCTGTTGTATCTGCCCGAGGAGGAACAGTCCGCCCTGCGCAACGCCCAGCGCGAGTACGT
GGCCGAGTGGGTCGAGGCCATCGAAGCGTTGTCCGACGACCTTTCGTCCGCCGATGCGCGGGCGCTCGCGCAGGCCGCCA
TCGGTGTGGTCACCGACATCTCGCAACACCCCCGGCTGCGCCAGCGGCCCGGTATCGCCGACGAACTGGCCGCCCTGATG
CGCGCGATCGTGGTGCCGTCCGGCCCGACGACCGCCTGA

Upstream 100 bases:

>100_bases
TGTACAGCTATACTGAGGAGGATAGTTAATATGAAATATGGTCATCAAGTTCGCACGGCGCGGATGCGAAACTTGATCCA
TGACGCGGGGAAAGAGTGAG

Downstream 100 bases:

>100_bases
TCAGGCCGGCAGTCCCGGTCGCAGACCCGGCGAGATCTCGGCGACGATGTCATCGGCGGTGAACCGGGCCACCGCCTCCA
CCACTGCCGGATCGGCTCCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein TetR; Regulatory Protein; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Repressor Mce3R; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPRATAARAETVKATLRSSARGRHRTEQVARAAAHLFQDYGYQNVSIDRIGAAVGLTGPAVYRHFKGKHDILVHALMTQV
HLVEELHTVTAEQGTTALEQLQLLLAGLGDITANGNEATLWRREQRHLEDAEREVFRRHFDENQERITAKLLAVRPEVGE
HKAELLGFAVLAMYSNTPNFRGNLSAERLQEIQSAAAWAIIDCDLPAPAEGAGPIPDLGQRQPAGRRERIIDAAARLFTE
RGFYDVHIDDIAKASEMSTATLYQHVSSKSEVLRAVLERGAEGLLYVTSDALAYAFTAEQALDALITTYVRQALGVYGRI
MHILATDLLYLPEEEQSALRNAQREYVAEWVEAIEALSDDLSSADARALAQAAIGVVTDISQHPRLRQRPGIADELAALM
RAIVVPSGPTTA

Sequences:

>Translated_412_residues
MPRATAARAETVKATLRSSARGRHRTEQVARAAAHLFQDYGYQNVSIDRIGAAVGLTGPAVYRHFKGKHDILVHALMTQV
HLVEELHTVTAEQGTTALEQLQLLLAGLGDITANGNEATLWRREQRHLEDAEREVFRRHFDENQERITAKLLAVRPEVGE
HKAELLGFAVLAMYSNTPNFRGNLSAERLQEIQSAAAWAIIDCDLPAPAEGAGPIPDLGQRQPAGRRERIIDAAARLFTE
RGFYDVHIDDIAKASEMSTATLYQHVSSKSEVLRAVLERGAEGLLYVTSDALAYAFTAEQALDALITTYVRQALGVYGRI
MHILATDLLYLPEEEQSALRNAQREYVAEWVEAIEALSDDLSSADARALAQAAIGVVTDISQHPRLRQRPGIADELAALM
RAIVVPSGPTTA
>Mature_411_residues
PRATAARAETVKATLRSSARGRHRTEQVARAAAHLFQDYGYQNVSIDRIGAAVGLTGPAVYRHFKGKHDILVHALMTQVH
LVEELHTVTAEQGTTALEQLQLLLAGLGDITANGNEATLWRREQRHLEDAEREVFRRHFDENQERITAKLLAVRPEVGEH
KAELLGFAVLAMYSNTPNFRGNLSAERLQEIQSAAAWAIIDCDLPAPAEGAGPIPDLGQRQPAGRRERIIDAAARLFTER
GFYDVHIDDIAKASEMSTATLYQHVSSKSEVLRAVLERGAEGLLYVTSDALAYAFTAEQALDALITTYVRQALGVYGRIM
HILATDLLYLPEEEQSALRNAQREYVAEWVEAIEALSDDLSSADARALAQAAIGVVTDISQHPRLRQRPGIADELAALMR
AIVVPSGPTTA

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45219; Mature: 45087

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRATAARAETVKATLRSSARGRHRTEQVARAAAHLFQDYGYQNVSIDRIGAAVGLTGPA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
VYRHFKGKHDILVHALMTQVHLVEELHTVTAEQGTTALEQLQLLLAGLGDITANGNEATL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHH
WRREQRHLEDAEREVFRRHFDENQERITAKLLAVRPEVGEHKAELLGFAVLAMYSNTPNF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
RGNLSAERLQEIQSAAAWAIIDCDLPAPAEGAGPIPDLGQRQPAGRRERIIDAAARLFTE
CCCCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RGFYDVHIDDIAKASEMSTATLYQHVSSKSEVLRAVLERGAEGLLYVTSDALAYAFTAEQ
CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
ALDALITTYVRQALGVYGRIMHILATDLLYLPEEEQSALRNAQREYVAEWVEAIEALSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSADARALAQAAIGVVTDISQHPRLRQRPGIADELAALMRAIVVPSGPTTA
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRATAARAETVKATLRSSARGRHRTEQVARAAAHLFQDYGYQNVSIDRIGAAVGLTGPA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHH
VYRHFKGKHDILVHALMTQVHLVEELHTVTAEQGTTALEQLQLLLAGLGDITANGNEATL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHH
WRREQRHLEDAEREVFRRHFDENQERITAKLLAVRPEVGEHKAELLGFAVLAMYSNTPNF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
RGNLSAERLQEIQSAAAWAIIDCDLPAPAEGAGPIPDLGQRQPAGRRERIIDAAARLFTE
CCCCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RGFYDVHIDDIAKASEMSTATLYQHVSSKSEVLRAVLERGAEGLLYVTSDALAYAFTAEQ
CCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
ALDALITTYVRQALGVYGRIMHILATDLLYLPEEEQSALRNAQREYVAEWVEAIEALSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSADARALAQAAIGVVTDISQHPRLRQRPGIADELAALMRAIVVPSGPTTA
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA