| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867392
Identifier: 119867392
GI number: 119867392
Start: 1437038
End: 1437427
Strand: Direct
Name: 119867392
Synonym: Mkms_1342
Alternate gene names: NA
Gene position: 1437038-1437427 (Clockwise)
Preceding gene: 119867388
Following gene: 119867394
Centisome position: 25.05
GC content: 66.41
Gene sequence:
>390_bases ATGTCTTTTGAGCAAAGCGAATTCGATCGCGTAGTCCGGTTCGACAACCGGCTACTCGGCTCCGTCGGCGGGGCGCCACA CACCGACACCGGAGCCGCACCGATGGGGGCCATGAGTCGGCCTCAGCTGAGTCTGGTTCCGGAACGCGTCGACGCCGAAC CCGAGGACGCCGACGATCTCTGGCAGGAGCGCGCCCTGTGCGCTCAGACCGATCCCGAGGCGTTCTTCCCCGAGAAGGGT GGTTCGACTCGCGAGGCGAAGCGGATCTGCATGGGCTGCGAGGTCAAGGACGAGTGCCTCGACTACGCGCTGGCCCATGA CGAGCGCTTCGGAATCTGGGGCGGGCTCTCCGAGCGCGAGCGCCGACGCCTCAAGCGCGGCATCATCTGA
Upstream 100 bases:
>100_bases GTCGCAGACCGAGATTCGATCACTTGTTCGAATTGGGCCGGCCCTTCAGTCCTGAGTGGGGCCACGTGGATCTACGACAC CGAGTGAGGAGGGGCGGGAA
Downstream 100 bases:
>100_bases CCCCAACCGGACCCCTCTGTGGGGGCCGCCTCAGTCGTCGTCGATCGTCGGGTCGATGACCGAGGGTTCGACCCCCAGAT ATGTGGCCACCTGAGCCACG
Product: transcription factor WhiB
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor WhiB Family Protein; Regulatory Protein; Transcriptional Regulatory; Sporulation Regulatory Protein; Whib-Like Transcriptional Regulator; WhiB Family Transcription Factor; Transcription Factor; Transcription Regulator; Regulatory Protein WhiB; Transcriptional Regulatory Protein; Transcriptional Regulator WhiB; WhiB Family Regulatory Protein; WhiB-Type Transcription Regulator; WhiB Transcriptional Regulator; WhiB Family Transcription Regulator
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSFEQSEFDRVVRFDNRLLGSVGGAPHTDTGAAPMGAMSRPQLSLVPERVDAEPEDADDLWQERALCAQTDPEAFFPEKG GSTREAKRICMGCEVKDECLDYALAHDERFGIWGGLSERERRRLKRGII
Sequences:
>Translated_129_residues MSFEQSEFDRVVRFDNRLLGSVGGAPHTDTGAAPMGAMSRPQLSLVPERVDAEPEDADDLWQERALCAQTDPEAFFPEKG GSTREAKRICMGCEVKDECLDYALAHDERFGIWGGLSERERRRLKRGII >Mature_128_residues SFEQSEFDRVVRFDNRLLGSVGGAPHTDTGAAPMGAMSRPQLSLVPERVDAEPEDADDLWQERALCAQTDPEAFFPEKGG STREAKRICMGCEVKDECLDYALAHDERFGIWGGLSERERRRLKRGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14458; Mature: 14327
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEQSEFDRVVRFDNRLLGSVGGAPHTDTGAAPMGAMSRPQLSLVPERVDAEPEDADDL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHH WQERALCAQTDPEAFFPEKGGSTREAKRICMGCEVKDECLDYALAHDERFGIWGGLSERE HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHH RRRLKRGII HHHHHHCCC >Mature Secondary Structure SFEQSEFDRVVRFDNRLLGSVGGAPHTDTGAAPMGAMSRPQLSLVPERVDAEPEDADDL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHH WQERALCAQTDPEAFFPEKGGSTREAKRICMGCEVKDECLDYALAHDERFGIWGGLSERE HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHH RRRLKRGII HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA