| Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
|---|---|
| Accession | NC_008704 |
| Length | 216,763 |
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The map label for this gene is 119855311
Identifier: 119855311
GI number: 119855311
Start: 120896
End: 122581
Strand: Reverse
Name: 119855311
Synonym: Mkms_5925
Alternate gene names: NA
Gene position: 122581-120896 (Counterclockwise)
Preceding gene: 119855316
Following gene: 119855310
Centisome position: 56.55
GC content: 70.94
Gene sequence:
>1686_bases GTGCGGGGTGTAACCGACAGAAGGAGCCACATGAGCGAGGTCAACGACCCCGACGCCGAGCACGACGACGACGAGCCCAC CATCCCTGACCTCACAGCGCTGAGCGCCGCGGTCCGCGCCGCGGTCACCGACGTGATGCGCCAGCCGGGCAACCCCGCCG CCCAGCTCGTCAACGACAACATCTCCCGCATCGCCACCGAAGCGCTGCAGGGCCATCCCGGTATCGCCGACGCGATCGGC GCGAGCAGCGCGCTCCAGGACACGCTGCGCCACCTGCAGACCCCGCTCGACGGCGGCATCACCAGCATCGCCCGCAGCGC GAGGGAGGCCGCCGCCGGCGGGGTCGCGTCCTGGCTGTCCCCGCAGATCACCGGCGGCCATCGCGGCATCAACAGCCTGA TCGCCGCCACCACGCCTGATTACGTCTCCCCGTTCGACCACCTGCATCAGCGCCAGCTCGACGCCGGCGTCGGCAGCAGC GTGCGGGCGGCGATCGACAGGTTGTCCACCTTCGAGTCCGTTGTCGGCGACCGGCTGCATCGCTACGACTTCGGGATCAA GCAGCTGCCGGGCGTGCAGTCGGCCATGGACGCCCTGACCCGCCACGACTCGACGTTCGCCAAGGCCCTGCAGCACCACG ACTACGGCATCAACCAGCTCCACGGCGCGCAGTCCGCCATGAACGCGCTCACCACCCACCAGTCGACCTTCGACGCGGTG ATGCAGCGCTACGACATCGGGATGGGGAAACTCACCGGCGCCCAGGCCGCGCTCGACGCGCTGACCGCCGACTGGCAGAC CAGCGCCGCGGGCCGCTTCGCGGCCGACTACCTCCACGGCGGCCGCGGCCCGCTCACCGACCTGCTCGGCATGCAGGGCT ACGGCTCGTCTCTCGGCAAGCTGATGCGCGATTCCCAGCACAGCGTGCAGGAGTTCATGCGGCAGCAGTCGCTGATGCCC GACCCGGCCGCCTGGATGCGGGACCTGTACAGCCCGGCGGCGTCGATCGTGGAGATGATGCGGTCGTGGTGGCCGGCGGC CGACCGCGGGTTCCATGCGGCGCGGGTCGCCCTGCGGGCGGCGCTGAAGGTGGTGCGTCTGCTGACGACCAACGATCCGG GGGCGCGTGAGGCCGTGCAGCGGTTCCTGGTCGAGTGGCTGGGGTTCAAGTACAGCTCCCACGATCTGGTGGCATCGGCC ACCCTGGTGCTGCTCAACGTGCAGTCGTGGTTGCCGACCGGCGCGGTGCCGCTGGACTTCGATCCGTGCCCGAAGCTGCG GAAGCTGACGCTGGCCGAGCACCGGGCCGTGAACCGGTTGAGCATCGACCCGGAGCTTCGGTTCCGGAAGCGGCCGTTGC TGTCGCTGGAGCAGCCGGTGAAGGTGACCGACAGCGACACCACGCCGACGTCGCTGCGTGAGCTGCTGCCCGACCGGGCC GCGCCGGATCCGTCCGCGGCCGCTGAGCCCGAGTTCAGCGACCCCCGGATCGTCCGGGTGTGGTGGCGGTTGACCCCGCG CGAGCAGGAAATTCTGCGTGTGAAGGCCCAACCCGGCGTCACCTGGGCGGCGGCCGCGGTCGAATGCGGCGGCACCCCGG CCGAGGGCGAGAAGCTGCGCCGCAAGGTCAACCGGCTGGCCAAGAAGGACAGCGACCCCCAGCCGCCGATCGCCGAGGCG GGCTGA
Upstream 100 bases:
>100_bases AGGCAGGTGCAACCTGGACGGAAAACCCGTCAGCGTGATGTGCATCACACTGTTGTCGTTTTCGGCGGCTGAGCCCCCTT CAAGGTGAGACCCGCGACAG
Downstream 100 bases:
>100_bases CCGGTGAGCCAGTACGTCCATCCCGCGCAGCGGGCCGTCGACGACGCCTACCGGCGTACCCACGGCCCGGTCGCGATGCT CGACGAAAGCTATTCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MRGVTDRRSHMSEVNDPDAEHDDDEPTIPDLTALSAAVRAAVTDVMRQPGNPAAQLVNDNISRIATEALQGHPGIADAIG ASSALQDTLRHLQTPLDGGITSIARSAREAAAGGVASWLSPQITGGHRGINSLIAATTPDYVSPFDHLHQRQLDAGVGSS VRAAIDRLSTFESVVGDRLHRYDFGIKQLPGVQSAMDALTRHDSTFAKALQHHDYGINQLHGAQSAMNALTTHQSTFDAV MQRYDIGMGKLTGAQAALDALTADWQTSAAGRFAADYLHGGRGPLTDLLGMQGYGSSLGKLMRDSQHSVQEFMRQQSLMP DPAAWMRDLYSPAASIVEMMRSWWPAADRGFHAARVALRAALKVVRLLTTNDPGAREAVQRFLVEWLGFKYSSHDLVASA TLVLLNVQSWLPTGAVPLDFDPCPKLRKLTLAEHRAVNRLSIDPELRFRKRPLLSLEQPVKVTDSDTTPTSLRELLPDRA APDPSAAAEPEFSDPRIVRVWWRLTPREQEILRVKAQPGVTWAAAAVECGGTPAEGEKLRRKVNRLAKKDSDPQPPIAEA G
Sequences:
>Translated_561_residues MRGVTDRRSHMSEVNDPDAEHDDDEPTIPDLTALSAAVRAAVTDVMRQPGNPAAQLVNDNISRIATEALQGHPGIADAIG ASSALQDTLRHLQTPLDGGITSIARSAREAAAGGVASWLSPQITGGHRGINSLIAATTPDYVSPFDHLHQRQLDAGVGSS VRAAIDRLSTFESVVGDRLHRYDFGIKQLPGVQSAMDALTRHDSTFAKALQHHDYGINQLHGAQSAMNALTTHQSTFDAV MQRYDIGMGKLTGAQAALDALTADWQTSAAGRFAADYLHGGRGPLTDLLGMQGYGSSLGKLMRDSQHSVQEFMRQQSLMP DPAAWMRDLYSPAASIVEMMRSWWPAADRGFHAARVALRAALKVVRLLTTNDPGAREAVQRFLVEWLGFKYSSHDLVASA TLVLLNVQSWLPTGAVPLDFDPCPKLRKLTLAEHRAVNRLSIDPELRFRKRPLLSLEQPVKVTDSDTTPTSLRELLPDRA APDPSAAAEPEFSDPRIVRVWWRLTPREQEILRVKAQPGVTWAAAAVECGGTPAEGEKLRRKVNRLAKKDSDPQPPIAEA G >Mature_561_residues MRGVTDRRSHMSEVNDPDAEHDDDEPTIPDLTALSAAVRAAVTDVMRQPGNPAAQLVNDNISRIATEALQGHPGIADAIG ASSALQDTLRHLQTPLDGGITSIARSAREAAAGGVASWLSPQITGGHRGINSLIAATTPDYVSPFDHLHQRQLDAGVGSS VRAAIDRLSTFESVVGDRLHRYDFGIKQLPGVQSAMDALTRHDSTFAKALQHHDYGINQLHGAQSAMNALTTHQSTFDAV MQRYDIGMGKLTGAQAALDALTADWQTSAAGRFAADYLHGGRGPLTDLLGMQGYGSSLGKLMRDSQHSVQEFMRQQSLMP DPAAWMRDLYSPAASIVEMMRSWWPAADRGFHAARVALRAALKVVRLLTTNDPGAREAVQRFLVEWLGFKYSSHDLVASA TLVLLNVQSWLPTGAVPLDFDPCPKLRKLTLAEHRAVNRLSIDPELRFRKRPLLSLEQPVKVTDSDTTPTSLRELLPDRA APDPSAAAEPEFSDPRIVRVWWRLTPREQEILRVKAQPGVTWAAAAVECGGTPAEGEKLRRKVNRLAKKDSDPQPPIAEA G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60965; Mature: 60965
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVTDRRSHMSEVNDPDAEHDDDEPTIPDLTALSAAVRAAVTDVMRQPGNPAAQLVNDN CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ISRIATEALQGHPGIADAIGASSALQDTLRHLQTPLDGGITSIARSAREAAAGGVASWLS HHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHC PQITGGHRGINSLIAATTPDYVSPFDHLHQRQLDAGVGSSVRAAIDRLSTFESVVGDRLH CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RYDFGIKQLPGVQSAMDALTRHDSTFAKALQHHDYGINQLHGAQSAMNALTTHQSTFDAV HHHCCHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MQRYDIGMGKLTGAQAALDALTADWQTSAAGRFAADYLHGGRGPLTDLLGMQGYGSSLGK HHHHHCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHH LMRDSQHSVQEFMRQQSLMPDPAAWMRDLYSPAASIVEMMRSWWPAADRGFHAARVALRA HHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ALKVVRLLTTNDPGAREAVQRFLVEWLGFKYSSHDLVASATLVLLNVQSWLPTGAVPLDF HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC DPCPKLRKLTLAEHRAVNRLSIDPELRFRKRPLLSLEQPVKVTDSDTTPTSLRELLPDRA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC APDPSAAAEPEFSDPRIVRVWWRLTPREQEILRVKAQPGVTWAAAAVECGGTPAEGEKLR CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHEEECCCCCCHHHHHHHCCCCCCCHHHHH RKVNRLAKKDSDPQPPIAEAG HHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRGVTDRRSHMSEVNDPDAEHDDDEPTIPDLTALSAAVRAAVTDVMRQPGNPAAQLVNDN CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ISRIATEALQGHPGIADAIGASSALQDTLRHLQTPLDGGITSIARSAREAAAGGVASWLS HHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHC PQITGGHRGINSLIAATTPDYVSPFDHLHQRQLDAGVGSSVRAAIDRLSTFESVVGDRLH CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RYDFGIKQLPGVQSAMDALTRHDSTFAKALQHHDYGINQLHGAQSAMNALTTHQSTFDAV HHHCCHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MQRYDIGMGKLTGAQAALDALTADWQTSAAGRFAADYLHGGRGPLTDLLGMQGYGSSLGK HHHHHCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHH LMRDSQHSVQEFMRQQSLMPDPAAWMRDLYSPAASIVEMMRSWWPAADRGFHAARVALRA HHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ALKVVRLLTTNDPGAREAVQRFLVEWLGFKYSSHDLVASATLVLLNVQSWLPTGAVPLDF HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC DPCPKLRKLTLAEHRAVNRLSIDPELRFRKRPLLSLEQPVKVTDSDTTPTSLRELLPDRA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC APDPSAAAEPEFSDPRIVRVWWRLTPREQEILRVKAQPGVTWAAAAVECGGTPAEGEKLR CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHEEECCCCCCHHHHHHHCCCCCCCHHHHH RKVNRLAKKDSDPQPPIAEAG HHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA