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The map label for this gene is yibD [C]

Identifier: 119899874

GI number: 119899874

Start: 3935717

End: 3936460

Strand: Reverse

Name: yibD [C]

Synonym: azo3585

Alternate gene names: 119899874

Gene position: 3936460-3935717 (Counterclockwise)

Preceding gene: 119899875

Following gene: 119899873

Centisome position: 89.95

GC content: 63.84

Gene sequence:

>744_bases
ATGACGGCACCGTTGGTGACCATCGCCGTTCCGTCCTACAACCAAGGGCGCTTTCTCGATGCCGCCCTGGCCTCGATTTT
CGCGCAGGACCTCCCACTGGAGGTCTTCGTTATGGACGGTGGTTCGACCGACGGATCCGTGGACGTGATCCGCAAGTGGG
AGAGCCGCCTCGCGGGGTGGCGTAGTGGACCCGACGGTGGTCAGGCGGCCGCCATCAACGAAGGCGTCGCGAGCGGCACA
GCGCCCTATGTGTGCTGGCTCAATAGTGATGATCTGTTTCTGCCGGGTGGTTTGCGGCACCTGTGCGACCACCTTGATAG
GGCGCCGGATGCGCCGGCGGTGTACGGCCGTGCCTGGAACCTCGATGACGCTACGGGACGGCGACGTCCGGTGTGGGTCG
AGCGGTTTTCCGAACGACGCCTGGCCGTGCGTTGCATCATTTCGCAGCCGGCAACGCTGATGCGTCGTTCGGCCTGGGAG
GCGGTGGGCGGGGTCGATCCCTCGATGCACATGGCGATGGATTATGACCTGTGGTGGCGCTTGTTCCGCCGTTTCGGCCC
GCTCCGGTTCGTCGACGAGTTCGTGGCAGTCAATCGTGAGCACGACGAAACCAAGACCAAGACGCAGCGCAGGCGGCATT
ACCGCGAGGCAATTGCGCTTGTCCGCCGCCACCATGGCCGGGTGCCACTGAAGTGGTGGTTCGCCCAGCCTTATGCCGTT
TGGTACAAGTCCATTGTCAGGTAG

Upstream 100 bases:

>100_bases
TCGACCGGATGACTGAAATGGGTTGGCAGGCGAAGACAGGCCTGCGCGAGGGAATCGCGAAGGCCTACCAGGACTATCTC
CAGCGTTTCGGGTCTCCGCG

Downstream 100 bases:

>100_bases
GCGAAGCCGGGCTTGCATGCGGGTCGTACACGTTTACCGGACTTATTTCCCCGATCCCCCGGGCGGCCTTCAGGAGGCTG
TCCGGCAGATTTGTATCGCG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTAPLVTIAVPSYNQGRFLDAALASIFAQDLPLEVFVMDGGSTDGSVDVIRKWESRLAGWRSGPDGGQAAAINEGVASGT
APYVCWLNSDDLFLPGGLRHLCDHLDRAPDAPAVYGRAWNLDDATGRRRPVWVERFSERRLAVRCIISQPATLMRRSAWE
AVGGVDPSMHMAMDYDLWWRLFRRFGPLRFVDEFVAVNREHDETKTKTQRRRHYREAIALVRRHHGRVPLKWWFAQPYAV
WYKSIVR

Sequences:

>Translated_247_residues
MTAPLVTIAVPSYNQGRFLDAALASIFAQDLPLEVFVMDGGSTDGSVDVIRKWESRLAGWRSGPDGGQAAAINEGVASGT
APYVCWLNSDDLFLPGGLRHLCDHLDRAPDAPAVYGRAWNLDDATGRRRPVWVERFSERRLAVRCIISQPATLMRRSAWE
AVGGVDPSMHMAMDYDLWWRLFRRFGPLRFVDEFVAVNREHDETKTKTQRRRHYREAIALVRRHHGRVPLKWWFAQPYAV
WYKSIVR
>Mature_246_residues
TAPLVTIAVPSYNQGRFLDAALASIFAQDLPLEVFVMDGGSTDGSVDVIRKWESRLAGWRSGPDGGQAAAINEGVASGTA
PYVCWLNSDDLFLPGGLRHLCDHLDRAPDAPAVYGRAWNLDDATGRRRPVWVERFSERRLAVRCIISQPATLMRRSAWEA
VGGVDPSMHMAMDYDLWWRLFRRFGPLRFVDEFVAVNREHDETKTKTQRRRHYREAIALVRRHHGRVPLKWWFAQPYAVW
YKSIVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28207; Mature: 28076

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLVTIAVPSYNQGRFLDAALASIFAQDLPLEVFVMDGGSTDGSVDVIRKWESRLAGW
CCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
RSGPDGGQAAAINEGVASGTAPYVCWLNSDDLFLPGGLRHLCDHLDRAPDAPAVYGRAWN
CCCCCCCCEEECCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEC
LDDATGRRRPVWVERFSERRLAVRCIISQPATLMRRSAWEAVGGVDPSMHMAMDYDLWWR
CCCCCCCCCCHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHCCCCCCHHHEECHHHHHH
LFRRFGPLRFVDEFVAVNREHDETKTKTQRRRHYREAIALVRRHHGRVPLKWWFAQPYAV
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
WYKSIVR
HHHHHCC
>Mature Secondary Structure 
TAPLVTIAVPSYNQGRFLDAALASIFAQDLPLEVFVMDGGSTDGSVDVIRKWESRLAGW
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
RSGPDGGQAAAINEGVASGTAPYVCWLNSDDLFLPGGLRHLCDHLDRAPDAPAVYGRAWN
CCCCCCCCEEECCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHCCCCCCCCCCCEEC
LDDATGRRRPVWVERFSERRLAVRCIISQPATLMRRSAWEAVGGVDPSMHMAMDYDLWWR
CCCCCCCCCCHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHCCCCCCHHHEECHHHHHH
LFRRFGPLRFVDEFVAVNREHDETKTKTQRRRHYREAIALVRRHHGRVPLKWWFAQPYAV
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
WYKSIVR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA