| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is thiE
Identifier: 119899739
GI number: 119899739
Start: 3784828
End: 3785448
Strand: Reverse
Name: thiE
Synonym: azo3450
Alternate gene names: 119899739
Gene position: 3785448-3784828 (Counterclockwise)
Preceding gene: 119899740
Following gene: 119899738
Centisome position: 86.5
GC content: 70.05
Gene sequence:
>621_bases ATGGGTGAGCGCATCCGCGGGCTTTATCTGGTGACGCCGGACGCCGCCGACAGCGCGACGCTGCTGGCGAGTGTGGAACG CGTGCTGCCGGCCAGGCCGGCCTTGCTGCAGTACCGCAACAAGCTTGCCGACCCGCTCCGGCAACTCGACGAGGCGCGCT CGTTGCGGCAGCTGTGCAGCAGCGCCGGCGTACCGCTGATCATCAACGATGACGTCGCGCTCGCCCGCGCGGTGGCCGCC GACGGGGTGCATCTGGGCCGGGATGACGGCAGTCCCGCAGCCGCCAGGGCGGTCCTCGGCGCCGACGCGTTGATTGGCGT CTCCTGCTACGACGAATGGGTGCGGGCGGAGGATGCGGCGGCAGCTGGCGCCGACTATGTGGCTTTTGGCGCAATGTTCC CGTCGTCCACGAAACCCGGCGCGGTACGCGCGCCGCTGACGCTGTTGACCCGCGCCCGCGCGGCGCTCGACTGTCCGGTG GCAGCCATTGGCGGCATCACCCTGGACAATGCACCGGCCTTGATCGAGGCCGGTGCCGATCTGCTTGCCGTCATATCGGA TGTATTCGCCGCCGCCGACCCGCTGCAGCGCGCGCTCGCCTATTCGGCCCTGTTCGCCTGA
Upstream 100 bases:
>100_bases CAGGATTTCGCCCAGCAGGCGCTCAAGCATGCCTACCGCGCGGGGATGGGGCTGGCGCTGCCCGACCGCTTCTTCTGGGC GCGCGGAAAGGGCGTGGGCG
Downstream 100 bases:
>100_bases AACTGCCCGCGGTGGACCGGCGCCGGTGGGCGCGCGACAATCCCGCCCTTTCCATAGCAGTCGCGAGTCGCAGCCATGAC CAGTCGCAATGAAGCCCTTT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MGERIRGLYLVTPDAADSATLLASVERVLPARPALLQYRNKLADPLRQLDEARSLRQLCSSAGVPLIINDDVALARAVAA DGVHLGRDDGSPAAARAVLGADALIGVSCYDEWVRAEDAAAAGADYVAFGAMFPSSTKPGAVRAPLTLLTRARAALDCPV AAIGGITLDNAPALIEAGADLLAVISDVFAAADPLQRALAYSALFA
Sequences:
>Translated_206_residues MGERIRGLYLVTPDAADSATLLASVERVLPARPALLQYRNKLADPLRQLDEARSLRQLCSSAGVPLIINDDVALARAVAA DGVHLGRDDGSPAAARAVLGADALIGVSCYDEWVRAEDAAAAGADYVAFGAMFPSSTKPGAVRAPLTLLTRARAALDCPV AAIGGITLDNAPALIEAGADLLAVISDVFAAADPLQRALAYSALFA >Mature_205_residues GERIRGLYLVTPDAADSATLLASVERVLPARPALLQYRNKLADPLRQLDEARSLRQLCSSAGVPLIINDDVALARAVAAD GVHLGRDDGSPAAARAVLGADALIGVSCYDEWVRAEDAAAAGADYVAFGAMFPSSTKPGAVRAPLTLLTRARAALDCPVA AIGGITLDNAPALIEAGADLLAVISDVFAAADPLQRALAYSALFA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=130, Percent_Identity=39.2307692307692, Blast_Score=71, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6325042, Length=208, Percent_Identity=31.7307692307692, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_AZOSB (A1KB60)
Other databases:
- EMBL: AM406670 - RefSeq: YP_934952.1 - ProteinModelPortal: A1KB60 - SMR: A1KB60 - STRING: A1KB60 - GeneID: 4608987 - GenomeReviews: AM406670_GR - KEGG: azo:azo3450 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: CERYKTR - ProtClustDB: PRK00043 - BioCyc: ASP62928:AZO3450-MONOMER - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 21204; Mature: 21073
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERIRGLYLVTPDAADSATLLASVERVLPARPALLQYRNKLADPLRQLDEARSLRQLCS CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAGVPLIINDDVALARAVAADGVHLGRDDGSPAAARAVLGADALIGVSCYDEWVRAEDAA HCCCCEEECCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGADYVAFGAMFPSSTKPGAVRAPLTLLTRARAALDCPVAAIGGITLDNAPALIEAGAD HCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCHHHHCCHH LLAVISDVFAAADPLQRALAYSALFA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GERIRGLYLVTPDAADSATLLASVERVLPARPALLQYRNKLADPLRQLDEARSLRQLCS CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAGVPLIINDDVALARAVAADGVHLGRDDGSPAAARAVLGADALIGVSCYDEWVRAEDAA HCCCCEEECCCHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGADYVAFGAMFPSSTKPGAVRAPLTLLTRARAALDCPVAAIGGITLDNAPALIEAGAD HCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCHHHHCCHH LLAVISDVFAAADPLQRALAYSALFA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA