| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is paaK [H]
Identifier: 119899730
GI number: 119899730
Start: 3773552
End: 3774784
Strand: Reverse
Name: paaK [H]
Synonym: azo3441
Alternate gene names: 119899730
Gene position: 3774784-3773552 (Counterclockwise)
Preceding gene: 119899731
Following gene: 119899729
Centisome position: 86.26
GC content: 69.18
Gene sequence:
>1233_bases ATGAGCTACTACGACGCCCGAGAAACCCGTGATCCCGCCGCGCGCGAGCAGGATTTGTTCGCCCGCCTGCCGGCACAGAT CGCCCATGCACGCACGCATGCGCCGGCCTTCGCGCGCCTGCTGGCGGATATCGATCCGGGCGCGGTCACCGGCCGCGAAG CGCTGGCGCGGCTGCCGGTGATCCGCAAGTCCGAACTGCTGGAGGCGCAGAAGGCCGCCCGGCCCTTCGGCGGATTTGCC GCGGTGGGCTGGGGCGCGAGTTGCCGCCGGGTGTTCGCGTCGCCGGGTCCGCTGTACGAGCCGGAAGGCAGCCGGGCCGA CTACTACCGTATGGCGCGCGCCTTTCATGCCGCCGGCTTTCGCGCGGGCGACCTGGTGCACAACACCTTCTCGTATCACT TCACGCCGGCCGGCTCGATGATGGAAACCGCTGCGCACGCCCTTGGCTGCACGGTCTTTCCGGCCGGCGTCGGGCAGACC GAGCAACAGGTGGCGGCGATCGCCGACCTGGCCCCCAATGCCTACGCCGGCACGCCGTCCTTTCTGCGCATCCTGCTCGA CAAGGCGGCGGAGCTTGGGGTGAAGCCTGCCTTCACCAAGGCCTTCGTCTCCGGCGAGGCCTTCCCGCCCAGCCTGCGCG ACGCGTTTGCCGCGCGCGGCGTGGCCGCCTTCCAGGCCTACGCCACCGCCGATATCGGACTCATCGCCTACGAAACCGAG GCGCGTGAAGGGATGGTGGTGGACGAGGACATCATCCTCGAGATCGTGCGGCCCGGCACCGGCGATCCGGTGGCCCCCGG CGAGGTCGGCGAGGTGGTGGTGACCACCTTCAATCCCGACTACCCGCTGATCCGCTTCGGCACCGGGGATCTGTCGGCCT TGCTGCCCGGTGCTTCGCCCTGCGGGCGCACCAACCTGCGCATCAAGGGCTGGATGGGGCGCGCCGACCAGACTGCCAAG GTCAAGGGCATGTTCGTCCATCCCGGCCAGATCGCAGACGTGGTCCGGCGTCATCCGCAACTCGGCCGCGCCCGGCTCGT GGTCGAGAATCCGGATCTGACCGACCGGATGACCTTGCACTGCGAAACCCAGGCGGGCAGCGATGCGCTTGCGGCCGCTG TCGCTACCAGCATTCGCGAACTGACCAAGTTGCGCGGCGAGGTCGTGTTCTGCGCGCCGGGAACGCTGCCCAACGACGGC AAGGTCATCGACGACCGGCGCACCTACGAATGA
Upstream 100 bases:
>100_bases AGTTGAACCGCCCACAACACAGACGACAGCGCGGGGCGGCGTCTTCCCCCGCGCGGTATCCGGCAGGCTGATCCTGTCAC CCGGTACGGGGAACGCTTCC
Downstream 100 bases:
>100_bases GCGCCGTGCTTCCCGGGTTCGTTGTGTGTGGGGGATACCGGCCCGGTTCCGGGCCGGTTTTTTTCCGCACCGTATCCCGG CGCCCAAGCAGGGTCCGCCG
Product: phenylacetate--CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSYYDARETRDPAAREQDLFARLPAQIAHARTHAPAFARLLADIDPGAVTGREALARLPVIRKSELLEAQKAARPFGGFA AVGWGASCRRVFASPGPLYEPEGSRADYYRMARAFHAAGFRAGDLVHNTFSYHFTPAGSMMETAAHALGCTVFPAGVGQT EQQVAAIADLAPNAYAGTPSFLRILLDKAAELGVKPAFTKAFVSGEAFPPSLRDAFAARGVAAFQAYATADIGLIAYETE AREGMVVDEDIILEIVRPGTGDPVAPGEVGEVVVTTFNPDYPLIRFGTGDLSALLPGASPCGRTNLRIKGWMGRADQTAK VKGMFVHPGQIADVVRRHPQLGRARLVVENPDLTDRMTLHCETQAGSDALAAAVATSIRELTKLRGEVVFCAPGTLPNDG KVIDDRRTYE
Sequences:
>Translated_410_residues MSYYDARETRDPAAREQDLFARLPAQIAHARTHAPAFARLLADIDPGAVTGREALARLPVIRKSELLEAQKAARPFGGFA AVGWGASCRRVFASPGPLYEPEGSRADYYRMARAFHAAGFRAGDLVHNTFSYHFTPAGSMMETAAHALGCTVFPAGVGQT EQQVAAIADLAPNAYAGTPSFLRILLDKAAELGVKPAFTKAFVSGEAFPPSLRDAFAARGVAAFQAYATADIGLIAYETE AREGMVVDEDIILEIVRPGTGDPVAPGEVGEVVVTTFNPDYPLIRFGTGDLSALLPGASPCGRTNLRIKGWMGRADQTAK VKGMFVHPGQIADVVRRHPQLGRARLVVENPDLTDRMTLHCETQAGSDALAAAVATSIRELTKLRGEVVFCAPGTLPNDG KVIDDRRTYE >Mature_409_residues SYYDARETRDPAAREQDLFARLPAQIAHARTHAPAFARLLADIDPGAVTGREALARLPVIRKSELLEAQKAARPFGGFAA VGWGASCRRVFASPGPLYEPEGSRADYYRMARAFHAAGFRAGDLVHNTFSYHFTPAGSMMETAAHALGCTVFPAGVGQTE QQVAAIADLAPNAYAGTPSFLRILLDKAAELGVKPAFTKAFVSGEAFPPSLRDAFAARGVAAFQAYATADIGLIAYETEA REGMVVDEDIILEIVRPGTGDPVAPGEVGEVVVTTFNPDYPLIRFGTGDLSALLPGASPCGRTNLRIKGWMGRADQTAKV KGMFVHPGQIADVVRRHPQLGRARLVVENPDLTDRMTLHCETQAGSDALAAAVATSIRELTKLRGEVVFCAPGTLPNDGK VIDDRRTYE
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=409, Percent_Identity=26.6503667481663, Blast_Score=105, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 43879; Mature: 43748
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYYDARETRDPAAREQDLFARLPAQIAHARTHAPAFARLLADIDPGAVTGREALARLPV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCC IRKSELLEAQKAARPFGGFAAVGWGASCRRVFASPGPLYEPEGSRADYYRMARAFHAAGF HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC RAGDLVHNTFSYHFTPAGSMMETAAHALGCTVFPAGVGQTEQQVAAIADLAPNAYAGTPS CCCHHHHCCEEEEECCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHH FLRILLDKAAELGVKPAFTKAFVSGEAFPPSLRDAFAARGVAAFQAYATADIGLIAYETE HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEECC AREGMVVDEDIILEIVRPGTGDPVAPGEVGEVVVTTFNPDYPLIRFGTGDLSALLPGASP CCCCEEECHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHCCCCCC CGRTNLRIKGWMGRADQTAKVKGMFVHPGQIADVVRRHPQLGRARLVVENPDLTDRMTLH CCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEE CETQAGSDALAAAVATSIRELTKLRGEVVFCAPGTLPNDGKVIDDRRTYE EECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCCC >Mature Secondary Structure SYYDARETRDPAAREQDLFARLPAQIAHARTHAPAFARLLADIDPGAVTGREALARLPV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHCCC IRKSELLEAQKAARPFGGFAAVGWGASCRRVFASPGPLYEPEGSRADYYRMARAFHAAGF HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC RAGDLVHNTFSYHFTPAGSMMETAAHALGCTVFPAGVGQTEQQVAAIADLAPNAYAGTPS CCCHHHHCCEEEEECCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHH FLRILLDKAAELGVKPAFTKAFVSGEAFPPSLRDAFAARGVAAFQAYATADIGLIAYETE HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEEEECC AREGMVVDEDIILEIVRPGTGDPVAPGEVGEVVVTTFNPDYPLIRFGTGDLSALLPGASP CCCCEEECHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHCCCCCC CGRTNLRIKGWMGRADQTAKVKGMFVHPGQIADVVRRHPQLGRARLVVENPDLTDRMTLH CCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEE CETQAGSDALAAAVATSIRELTKLRGEVVFCAPGTLPNDGKVIDDRRTYE EECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]