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The map label for this gene is yajR [H]

Identifier: 119899675

GI number: 119899675

Start: 3723325

End: 3724530

Strand: Reverse

Name: yajR [H]

Synonym: azo3386

Alternate gene names: 119899675

Gene position: 3724530-3723325 (Counterclockwise)

Preceding gene: 119899678

Following gene: 119899674

Centisome position: 85.11

GC content: 68.91

Gene sequence:

>1206_bases
ATGTCTGCCCCTTCGCGCGATCCGATGACGCCCGCCGAGCGCCGCGCCGGCGTCAGTCTGGCGGCCATCTTCGCGCTGCG
CATGCTTGGCCTGTTCCTGATCCTGCCGGTGTTCGCAGTCCATGCCCACGAGTTGCGCGGCGGCGATAACCTGACCCTGG
TCGGCCTTGCGATCGGCGCCTACGGTTTTACCCAGGCCTGTCTGCAGATCGCCTACGGCGCCGCGTCCGACCGCTTCGGG
CGCAAGCCGGTGATCGTTTTCGGCCTGTTGCTGTTCGTGTTCGGCAGCGTCGTCGCGGCGCTGGCGGACGACATCTTCGG
CGTGATCGCCGGGCGCGTGCTGCAGGGCTCGGGCGCCATCTCGGCCGCGGTCACCGCGCTGGCGGCGGACCTGACCCGCG
ACCAGCACCGCACCAAGGTGATGGCGATGATCGGATCGAGCATCGGTCTGGTGTTCGCCGGCTCCATGGTGGCCGCGCCG
CTGCTCTATGCACGCATCGGGCTGGATGGCCTGTTCTGGCTTACCGCGCTGCTTGCCGCCGCTGCCATCGGCGTGCTGCT
CTGGATCGTTCCCGCCGCCCCGCCGGTGCCGCGGGGCAGCCGCGGCAGCCTGGGTGAAGTGCTGCGCAACGGACAGTTGA
TGCGGCTTAATTTCGGCGTCTTCGTGCTGCACCTCATCCAGACCATGATGTGGGTGGTAGTGCCGTCGGGCCTGGTGGCG
GGCGGCCTCGCGGTCGAGGCGCACTGGAAGATCTACCTGCCGGCGGTGCTGCTGTCGTTCTGCGCGATGGTCCCTGCGGT
CATCGTGGCGGAGCGGCGCAACCTGGTGAAGCGGGTGTTCGGCGCTGCGGTGCTGTTGCTGCTGCTGGTGCAAGTGGGGC
TTTATCTCAGCGTTGGCAGCGTGATCGCGCTCGCCACGGTGCTGACGCTGTTCTTCGTGGCCTTCAATGTGCTGGAGGCG
ACGCAGCCGTCGTGGATTTCGCGGGTGGCACCGCCGCACGCCAAGGGTATGGCGCTCGGGGTGTATAACACGCTGCAGTC
GATCGGGCTGTTCCTGGGCGGCGTGCTCGGGGGCTGGCTCGCGCAGCATTTCGGCACCGCCGGCGTCAGCCTGTGTGCGG
CGGCGCTGGCGCTGGCATGGCTGCTGGTGGCGGCGACGATGACGCCTCCGCCGCCCCGGCCGCAGGTCGCGACGGCACGA
AACTGA

Upstream 100 bases:

>100_bases
GAAGCGGGCCAACGCATGACTATAAGAGAGAAGCCTGCGCCGGGCCAATGCTAGAATCCTTCCCCCGCCCGACCCGATAT
CCCCTGGAAGTCACATCAGC

Downstream 100 bases:

>100_bases
CCGAAATCAGCGCCGGCCGCGCAGGCCGGCACGCATTCAAAGGAGAACCGGATGGCATCCGTCAACAAAGTCATTCTGAT
CGGCAACCTCGGCGCCGATC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSAPSRDPMTPAERRAGVSLAAIFALRMLGLFLILPVFAVHAHELRGGDNLTLVGLAIGAYGFTQACLQIAYGAASDRFG
RKPVIVFGLLLFVFGSVVAALADDIFGVIAGRVLQGSGAISAAVTALAADLTRDQHRTKVMAMIGSSIGLVFAGSMVAAP
LLYARIGLDGLFWLTALLAAAAIGVLLWIVPAAPPVPRGSRGSLGEVLRNGQLMRLNFGVFVLHLIQTMMWVVVPSGLVA
GGLAVEAHWKIYLPAVLLSFCAMVPAVIVAERRNLVKRVFGAAVLLLLLVQVGLYLSVGSVIALATVLTLFFVAFNVLEA
TQPSWISRVAPPHAKGMALGVYNTLQSIGLFLGGVLGGWLAQHFGTAGVSLCAAALALAWLLVAATMTPPPPRPQVATAR
N

Sequences:

>Translated_401_residues
MSAPSRDPMTPAERRAGVSLAAIFALRMLGLFLILPVFAVHAHELRGGDNLTLVGLAIGAYGFTQACLQIAYGAASDRFG
RKPVIVFGLLLFVFGSVVAALADDIFGVIAGRVLQGSGAISAAVTALAADLTRDQHRTKVMAMIGSSIGLVFAGSMVAAP
LLYARIGLDGLFWLTALLAAAAIGVLLWIVPAAPPVPRGSRGSLGEVLRNGQLMRLNFGVFVLHLIQTMMWVVVPSGLVA
GGLAVEAHWKIYLPAVLLSFCAMVPAVIVAERRNLVKRVFGAAVLLLLLVQVGLYLSVGSVIALATVLTLFFVAFNVLEA
TQPSWISRVAPPHAKGMALGVYNTLQSIGLFLGGVLGGWLAQHFGTAGVSLCAAALALAWLLVAATMTPPPPRPQVATAR
N
>Mature_400_residues
SAPSRDPMTPAERRAGVSLAAIFALRMLGLFLILPVFAVHAHELRGGDNLTLVGLAIGAYGFTQACLQIAYGAASDRFGR
KPVIVFGLLLFVFGSVVAALADDIFGVIAGRVLQGSGAISAAVTALAADLTRDQHRTKVMAMIGSSIGLVFAGSMVAAPL
LYARIGLDGLFWLTALLAAAAIGVLLWIVPAAPPVPRGSRGSLGEVLRNGQLMRLNFGVFVLHLIQTMMWVVVPSGLVAG
GLAVEAHWKIYLPAVLLSFCAMVPAVIVAERRNLVKRVFGAAVLLLLLVQVGLYLSVGSVIALATVLTLFFVAFNVLEAT
QPSWISRVAPPHAKGMALGVYNTLQSIGLFLGGVLGGWLAQHFGTAGVSLCAAALALAWLLVAATMTPPPPRPQVATARN

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=389, Percent_Identity=46.2724935732648, Blast_Score=329, Evalue=2e-91,
Organism=Escherichia coli, GI1790146, Length=141, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41855; Mature: 41723

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAPSRDPMTPAERRAGVSLAAIFALRMLGLFLILPVFAVHAHELRGGDNLTLVGLAIGA
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH
YGFTQACLQIAYGAASDRFGRKPVIVFGLLLFVFGSVVAALADDIFGVIAGRVLQGSGAI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SAAVTALAADLTRDQHRTKVMAMIGSSIGLVFAGSMVAAPLLYARIGLDGLFWLTALLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AAIGVLLWIVPAAPPVPRGSRGSLGEVLRNGQLMRLNFGVFVLHLIQTMMWVVVPSGLVA
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHH
GGLAVEAHWKIYLPAVLLSFCAMVPAVIVAERRNLVKRVFGAAVLLLLLVQVGLYLSVGS
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIALATVLTLFFVAFNVLEATQPSWISRVAPPHAKGMALGVYNTLQSIGLFLGGVLGGWL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQHFGTAGVSLCAAALALAWLLVAATMTPPPPRPQVATARN
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]