Click here to switch to the map view.

The map label for this gene is algW [H]

Identifier: 119899626

GI number: 119899626

Start: 3678696

End: 3679862

Strand: Direct

Name: algW [H]

Synonym: azo3337

Alternate gene names: 119899626

Gene position: 3678696-3679862 (Clockwise)

Preceding gene: 119899624

Following gene: 119899630

Centisome position: 84.06

GC content: 66.92

Gene sequence:

>1167_bases
ATGCGCCGCCTTTGGCTGATCTTCGCGCAGGCCGTTACAGTCAGCGTCGCGGTCCTCTTCGTCCTGAATACGCTCAAACC
GGAGTGGCTGCGTGCCGGCACGCCCGGTTCGGTGATCTCCATCCTCGAAGCCCCGGCCCCACGCATCGAGGGCGAAACCG
CGCCCAACTCCTACGCCGCGGCCGCGCAACGCTCACTGCCTTCCGTGGTGCACGTCTATACGAGCAAGGAGGTGCGCAGC
CAGCGCCACCCTCTGCTGGACGACCCCTTGTTCCGCCATTTCTTCGGCGAACGGCCGGACGGCGGCAACCAGCGCACCTC
GGGCCTGGGCTCCGGCGTCATCGTCAGCCCCGACGGTTTCGTACTGACCAACAACCATGTGATCGAAGCTGCCGACGAGA
TCGAGGTCGCCCTCAACGACGGCCGCAAGTTCCCGGCGAAACTGGTGGGCCGTGACCCGGAAACCGACCTCGCCGTACTC
AAGCTCAAGACCGACGCGCAACTCCCGGCGATCACCTTCGCGGGCGGAAGCGACAGCCTGCAAGTCGGCGACGTCGTGCT
TGCAATCGGCAATCCCTTTGGCGTCGGGCAGACCGTCACGATGGGCATCGTGTCGGCGCTGGGGCGTACGCACCTGGGCA
TCAACACGTTCGAGAACTACATCCAGACCGATGCCGCGATCAACCCGGGCAACTCCGGGGGAGCGCTGGTGGACACGCAC
GGCAACCTCGTCGGCATCAACACCGCCATCTATTCGCGTTCGGGCGGCTCGCTCGGGATCGGCTTCGCCATTCCGGTGTC
GCTTGCCCGCAGCGTGCTGGAGCAGATCGTCGCGTCGGGCGAAGTTACCCGCGGCTGGGTCGGCGTGGAGATACAGGAAA
TCACGCCCGAACTGGCAGAGTCCTTCGGCCTTGGCGACACCCGCGGCGCGCTCATCTCCGGCGTGTTGCGCGGCAGTCCG
GCAGACCGGGCCGGGATCCGGCCGGGAGACGTGCTGGTCGCGGTGGATGGGCACGCGGTGCGGGATCCGAAGAACATGCT
GGAACAAGTGGCCGCGCTGTCACCGGGCCGCACTGCGCAGTTCCGCCTCAAGCGGGCCGCCGGCGAACTCGAACTCAACG
TCGAAGTGGGCCGGCGCCCCACCCCGCAGTCGAACGGACGTCAATGA

Upstream 100 bases:

>100_bases
ATATCACTCCGACTTTTTCCGTTTCGCGCGGCCATTGTTCCGCGACCCACTGGTTACCCAGCGCCGCGCGCCGACACTCG
AATAGCAAAGTGGTCCCATT

Downstream 100 bases:

>100_bases
AAAAGAGGGCCCTGAGGCCCTCGTTCCCTTGACCCGATCCGCGCTCTACTGCGCGTCAGGATCGGACGATGCTAGCGGCT
CCAGCGCCTTGCCCGGCGAT

Product: serine protease AlgW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRRLWLIFAQAVTVSVAVLFVLNTLKPEWLRAGTPGSVISILEAPAPRIEGETAPNSYAAAAQRSLPSVVHVYTSKEVRS
QRHPLLDDPLFRHFFGERPDGGNQRTSGLGSGVIVSPDGFVLTNNHVIEAADEIEVALNDGRKFPAKLVGRDPETDLAVL
KLKTDAQLPAITFAGGSDSLQVGDVVLAIGNPFGVGQTVTMGIVSALGRTHLGINTFENYIQTDAAINPGNSGGALVDTH
GNLVGINTAIYSRSGGSLGIGFAIPVSLARSVLEQIVASGEVTRGWVGVEIQEITPELAESFGLGDTRGALISGVLRGSP
ADRAGIRPGDVLVAVDGHAVRDPKNMLEQVAALSPGRTAQFRLKRAAGELELNVEVGRRPTPQSNGRQ

Sequences:

>Translated_388_residues
MRRLWLIFAQAVTVSVAVLFVLNTLKPEWLRAGTPGSVISILEAPAPRIEGETAPNSYAAAAQRSLPSVVHVYTSKEVRS
QRHPLLDDPLFRHFFGERPDGGNQRTSGLGSGVIVSPDGFVLTNNHVIEAADEIEVALNDGRKFPAKLVGRDPETDLAVL
KLKTDAQLPAITFAGGSDSLQVGDVVLAIGNPFGVGQTVTMGIVSALGRTHLGINTFENYIQTDAAINPGNSGGALVDTH
GNLVGINTAIYSRSGGSLGIGFAIPVSLARSVLEQIVASGEVTRGWVGVEIQEITPELAESFGLGDTRGALISGVLRGSP
ADRAGIRPGDVLVAVDGHAVRDPKNMLEQVAALSPGRTAQFRLKRAAGELELNVEVGRRPTPQSNGRQ
>Mature_388_residues
MRRLWLIFAQAVTVSVAVLFVLNTLKPEWLRAGTPGSVISILEAPAPRIEGETAPNSYAAAAQRSLPSVVHVYTSKEVRS
QRHPLLDDPLFRHFFGERPDGGNQRTSGLGSGVIVSPDGFVLTNNHVIEAADEIEVALNDGRKFPAKLVGRDPETDLAVL
KLKTDAQLPAITFAGGSDSLQVGDVVLAIGNPFGVGQTVTMGIVSALGRTHLGINTFENYIQTDAAINPGNSGGALVDTH
GNLVGINTAIYSRSGGSLGIGFAIPVSLARSVLEQIVASGEVTRGWVGVEIQEITPELAESFGLGDTRGALISGVLRGSP
ADRAGIRPGDVLVAVDGHAVRDPKNMLEQVAALSPGRTAQFRLKRAAGELELNVEVGRRPTPQSNGRQ

Specific function: Protease with a shared specificity with degP [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI7019477, Length=310, Percent_Identity=33.5483870967742, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI24308541, Length=299, Percent_Identity=31.7725752508361, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI4506141, Length=314, Percent_Identity=32.1656050955414, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI22129776, Length=317, Percent_Identity=32.807570977918, Blast_Score=132, Evalue=5e-31,
Organism=Escherichia coli, GI1789629, Length=345, Percent_Identity=43.4782608695652, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1786356, Length=353, Percent_Identity=41.643059490085, Blast_Score=249, Evalue=3e-67,
Organism=Escherichia coli, GI1789630, Length=332, Percent_Identity=40.0602409638554, Blast_Score=214, Evalue=5e-57,
Organism=Drosophila melanogaster, GI24646839, Length=305, Percent_Identity=30.1639344262295, Blast_Score=135, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40859; Mature: 40859

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLWLIFAQAVTVSVAVLFVLNTLKPEWLRAGTPGSVISILEAPAPRIEGETAPNSYAA
CCEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHH
AAQRSLPSVVHVYTSKEVRSQRHPLLDDPLFRHFFGERPDGGNQRTSGLGSGVIVSPDGF
HHHHCCCCEEEEECCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE
VLTNNHVIEAADEIEVALNDGRKFPAKLVGRDPETDLAVLKLKTDAQLPAITFAGGSDSL
EEECCCEEECCCCEEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCE
QVGDVVLAIGNPFGVGQTVTMGIVSALGRTHLGINTFENYIQTDAAINPGNSGGALVDTH
EECEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECC
GNLVGINTAIYSRSGGSLGIGFAIPVSLARSVLEQIVASGEVTRGWVGVEIQEITPELAE
CCEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHH
SFGLGDTRGALISGVLRGSPADRAGIRPGDVLVAVDGHAVRDPKNMLEQVAALSPGRTAQ
HCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHH
FRLKRAAGELELNVEVGRRPTPQSNGRQ
HHEECCCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRRLWLIFAQAVTVSVAVLFVLNTLKPEWLRAGTPGSVISILEAPAPRIEGETAPNSYAA
CCEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHH
AAQRSLPSVVHVYTSKEVRSQRHPLLDDPLFRHFFGERPDGGNQRTSGLGSGVIVSPDGF
HHHHCCCCEEEEECCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE
VLTNNHVIEAADEIEVALNDGRKFPAKLVGRDPETDLAVLKLKTDAQLPAITFAGGSDSL
EEECCCEEECCCCEEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCCE
QVGDVVLAIGNPFGVGQTVTMGIVSALGRTHLGINTFENYIQTDAAINPGNSGGALVDTH
EECEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECC
GNLVGINTAIYSRSGGSLGIGFAIPVSLARSVLEQIVASGEVTRGWVGVEIQEITPELAE
CCEEEEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHH
SFGLGDTRGALISGVLRGSPADRAGIRPGDVLVAVDGHAVRDPKNMLEQVAALSPGRTAQ
HCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHH
FRLKRAAGELELNVEVGRRPTPQSNGRQ
HHEECCCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8576051; 9278503 [H]