| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is fimV2
Identifier: 119899624
GI number: 119899624
Start: 3675922
End: 3677832
Strand: Direct
Name: fimV2
Synonym: azo3335
Alternate gene names: NA
Gene position: 3675922-3677832 (Clockwise)
Preceding gene: 119899607
Following gene: 119899626
Centisome position: 84.0
GC content: 69.81
Gene sequence:
>1911_bases ATGAGAACCAGACGCACCACGCTCGCCACCCTCGTCGCCGGCCTCACATTCGCCTCTGCGCCGCAAGTTCACGCCCTCGT GCTTGGCGAGATCGTCTCCGTTTCCGCTGTCGGCGAGCCGCTTCGCATCGAAATCCGCAGCCTCGACGGCCGCACCGACG AAGCCGGAAACTGCTTGCGCGTGAGCGCGCCGCCCGATGCCGACCCCGGCCTCCCCACCGTGGGCAAGGCGCGGATCAGC GCCGCGGGCAGCGGCCAGAACGCGCGCGTCATTCTCACCACCGGCGTTGCATTTCACGAACCCGTTGCGCAACTCTTCAT CGAGGACATCTGCAACGCGCATCTTCGTCGGCACTACAACCTGCTGCTGTCGTACCCGGTAGCGCCGCCAGCGAGCGCTG TCGCTGCTCCTGCACCGGCTTCCGCGCCCCAGCCGGAAAGATCGTCCCGCAGCGCGTCACAATCCCGCCGCGCCGCCACC GCGAGCACAAACCGGTGGACTACCGCGCCGGGCGAATCGCTCGATTCCCTGGCCGCCGCGCTTTACCCCGATGACGTGAC CGCGCAACGTCGCTTTGCCGCCGCCACGGCGAAAGCCAACCCAGCCCTATTCGCCGATCTCGCAGCCCGCGGCCGCGAGC TTCCCGCCGGAACCGAGCTGATCATTCCCGACATGCGACGCAGCGCGGAGCGACCGGCCACGGCGGAAGCGTCCAGCACC GCAACCGGCGAAGCGCGGGCGCCTGCGCGGTCGAAAGCTGCTGCGCAACGCGAACCCGATCGTCTGGTGGTGGCGAACGA CCCCGAGTCGCGCCAGCCGGCCTCCACAGCACGTGCCACCGCCGCAGCGAACGATCCCACTTGGACCGCGCGCGAGCGCG AACTTGCCGTCGCGGTGGATCGGACGATTGTCGCGCAGATGGAGCTGCTCTCACGCATCAAGGAACTCGAGCAGTTGCAG GCCCAGCTGGAAGCCCGCGCAGCGCAGCTCGGCGTCCAGCTTCCGGCTGCAGCGGCTGCACCTGCCGCGCCCAGCGCCGC CGCCCCCGAAGCCGCAGCTCCGGCGCCCGCGCCGGTGGCTCCGGCAGCCCCGCCAGCCCCCGTACAGTCCGCCCCCCCGC CCGCCGAACCGGAGCGGGACTACCGCAGCCTGGCCCTGGTTGGAGGACTCGCGGCCCTCGCGCTGGCCCTGGCCGGGGTG CTCATCGCGCGCCGGCGCCGTCCAGCCGGGGCGGACAGCGCGGGCACCGAGGACTTCATCCCGACAGCCGTGCCTGCGGC ACGCCCTGCCACCCCTTCCGCCCCCCGCTCCGCGCCGGCCCCGGCACCCGCGGTTCAGGACGAACTGCCAGCGCTGTCGC TGACTCAGGAACCTCGTTCGATCGCCCCGGCTCTGGTTCTGGAAGAGGAGGTGGAAGAACACGACTCCGCCATCGAACTG GCCGAGATCATGATGAGCTTCGGCCGCGTGCACGGTGCCGCCGAAACGCTTGCGGAGTTCATCCGCCACAACCCCAAGCA GGCGGTTACGCCGTGGTTGAAACTGCTTGAGGTGTATCGGGCGGCAGGGTTGCGGGCCGAATTCGACGCGCTCGCACGCC AGCTCAACAAGACTTTCAACGTGCTGGCCGTGACGTGGGAGAACTTCGACGCCGCACGCAGCGCTCCGGCCTCGATCGAG CTGTTGCCGCACATCGTCGCCAATCTGGAGAAACTGTGGGGCACGCGCGAATGCCAGGGTTACATCCACACGCTGCTGCG CGATAACCGCGACGGCACTCGGCAGGGCTTCCCGCTCAGGATCATCGACGAATTGCTCTTGCTCGCCGCCATTCTCGAGC AGCACCTCGGCCCTTACCGCGCGGAGCCCGACGCGCCGCCGCCCGAGGCGGGCGAACGCAAGGCCGCCTGA
Upstream 100 bases:
>100_bases GCACCATTCCAACTGCACACTTGCTCGACATTGCTGGAATGCAACACCATAGTCTGATACAAACCACATCATCCTCCTGC GACCGCCGGACAAGCGGAAT
Downstream 100 bases:
>100_bases GCCCTCAGACGGGGTTGTCGAGATCGAGGAAGTCGGCCTCCAGGCCCAGCGTACGGGCCAGATAATCCGCTAGTGCGCGA ACGCCGTAGCGCTCGGTGGC
Product: putative type 4 pilus biogenesis
Products: NA
Alternate protein names: Tfp Pilus Assembly Protein FimV-Like Protein
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MRTRRTTLATLVAGLTFASAPQVHALVLGEIVSVSAVGEPLRIEIRSLDGRTDEAGNCLRVSAPPDADPGLPTVGKARIS AAGSGQNARVILTTGVAFHEPVAQLFIEDICNAHLRRHYNLLLSYPVAPPASAVAAPAPASAPQPERSSRSASQSRRAAT ASTNRWTTAPGESLDSLAAALYPDDVTAQRRFAAATAKANPALFADLAARGRELPAGTELIIPDMRRSAERPATAEASST ATGEARAPARSKAAAQREPDRLVVANDPESRQPASTARATAAANDPTWTARERELAVAVDRTIVAQMELLSRIKELEQLQ AQLEARAAQLGVQLPAAAAAPAAPSAAAPEAAAPAPAPVAPAAPPAPVQSAPPPAEPERDYRSLALVGGLAALALALAGV LIARRRRPAGADSAGTEDFIPTAVPAARPATPSAPRSAPAPAPAVQDELPALSLTQEPRSIAPALVLEEEVEEHDSAIEL AEIMMSFGRVHGAAETLAEFIRHNPKQAVTPWLKLLEVYRAAGLRAEFDALARQLNKTFNVLAVTWENFDAARSAPASIE LLPHIVANLEKLWGTRECQGYIHTLLRDNRDGTRQGFPLRIIDELLLLAAILEQHLGPYRAEPDAPPPEAGERKAA
Sequences:
>Translated_636_residues MRTRRTTLATLVAGLTFASAPQVHALVLGEIVSVSAVGEPLRIEIRSLDGRTDEAGNCLRVSAPPDADPGLPTVGKARIS AAGSGQNARVILTTGVAFHEPVAQLFIEDICNAHLRRHYNLLLSYPVAPPASAVAAPAPASAPQPERSSRSASQSRRAAT ASTNRWTTAPGESLDSLAAALYPDDVTAQRRFAAATAKANPALFADLAARGRELPAGTELIIPDMRRSAERPATAEASST ATGEARAPARSKAAAQREPDRLVVANDPESRQPASTARATAAANDPTWTARERELAVAVDRTIVAQMELLSRIKELEQLQ AQLEARAAQLGVQLPAAAAAPAAPSAAAPEAAAPAPAPVAPAAPPAPVQSAPPPAEPERDYRSLALVGGLAALALALAGV LIARRRRPAGADSAGTEDFIPTAVPAARPATPSAPRSAPAPAPAVQDELPALSLTQEPRSIAPALVLEEEVEEHDSAIEL AEIMMSFGRVHGAAETLAEFIRHNPKQAVTPWLKLLEVYRAAGLRAEFDALARQLNKTFNVLAVTWENFDAARSAPASIE LLPHIVANLEKLWGTRECQGYIHTLLRDNRDGTRQGFPLRIIDELLLLAAILEQHLGPYRAEPDAPPPEAGERKAA >Mature_636_residues MRTRRTTLATLVAGLTFASAPQVHALVLGEIVSVSAVGEPLRIEIRSLDGRTDEAGNCLRVSAPPDADPGLPTVGKARIS AAGSGQNARVILTTGVAFHEPVAQLFIEDICNAHLRRHYNLLLSYPVAPPASAVAAPAPASAPQPERSSRSASQSRRAAT ASTNRWTTAPGESLDSLAAALYPDDVTAQRRFAAATAKANPALFADLAARGRELPAGTELIIPDMRRSAERPATAEASST ATGEARAPARSKAAAQREPDRLVVANDPESRQPASTARATAAANDPTWTARERELAVAVDRTIVAQMELLSRIKELEQLQ AQLEARAAQLGVQLPAAAAAPAAPSAAAPEAAAPAPAPVAPAAPPAPVQSAPPPAEPERDYRSLALVGGLAALALALAGV LIARRRRPAGADSAGTEDFIPTAVPAARPATPSAPRSAPAPAPAVQDELPALSLTQEPRSIAPALVLEEEVEEHDSAIEL AEIMMSFGRVHGAAETLAEFIRHNPKQAVTPWLKLLEVYRAAGLRAEFDALARQLNKTFNVLAVTWENFDAARSAPASIE LLPHIVANLEKLWGTRECQGYIHTLLRDNRDGTRQGFPLRIIDELLLLAAILEQHLGPYRAEPDAPPPEAGERKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66888; Mature: 66888
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRRTTLATLVAGLTFASAPQVHALVLGEIVSVSAVGEPLRIEIRSLDGRTDEAGNCLR CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEE VSAPPDADPGLPTVGKARISAAGSGQNARVILTTGVAFHEPVAQLFIEDICNAHLRRHYN ECCCCCCCCCCCCCCCHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LLLSYPVAPPASAVAAPAPASAPQPERSSRSASQSRRAATASTNRWTTAPGESLDSLAAA HHEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH LYPDDVTAQRRFAAATAKANPALFADLAARGRELPAGTELIIPDMRRSAERPATAEASST HCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEECCHHHHHCCCCCCCCCCCC ATGEARAPARSKAAAQREPDRLVVANDPESRQPASTARATAAANDPTWTARERELAVAVD CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH RTIVAQMELLSRIKELEQLQAQLEARAAQLGVQLPAAAAAPAAPSAAAPEAAAPAPAPVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC PAAPPAPVQSAPPPAEPERDYRSLALVGGLAALALALAGVLIARRRRPAGADSAGTEDFI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PTAVPAARPATPSAPRSAPAPAPAVQDELPALSLTQEPRSIAPALVLEEEVEEHDSAIEL CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AEIMMSFGRVHGAAETLAEFIRHNPKQAVTPWLKLLEVYRAAGLRAEFDALARQLNKTFN HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCE VLAVTWENFDAARSAPASIELLPHIVANLEKLWGTRECQGYIHTLLRDNRDGTRQGFPLR EEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHH IIDELLLLAAILEQHLGPYRAEPDAPPPEAGERKAA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTRRTTLATLVAGLTFASAPQVHALVLGEIVSVSAVGEPLRIEIRSLDGRTDEAGNCLR CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEE VSAPPDADPGLPTVGKARISAAGSGQNARVILTTGVAFHEPVAQLFIEDICNAHLRRHYN ECCCCCCCCCCCCCCCHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LLLSYPVAPPASAVAAPAPASAPQPERSSRSASQSRRAATASTNRWTTAPGESLDSLAAA HHEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH LYPDDVTAQRRFAAATAKANPALFADLAARGRELPAGTELIIPDMRRSAERPATAEASST HCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEECCHHHHHCCCCCCCCCCCC ATGEARAPARSKAAAQREPDRLVVANDPESRQPASTARATAAANDPTWTARERELAVAVD CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH RTIVAQMELLSRIKELEQLQAQLEARAAQLGVQLPAAAAAPAAPSAAAPEAAAPAPAPVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC PAAPPAPVQSAPPPAEPERDYRSLALVGGLAALALALAGVLIARRRRPAGADSAGTEDFI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PTAVPAARPATPSAPRSAPAPAPAVQDELPALSLTQEPRSIAPALVLEEEVEEHDSAIEL CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AEIMMSFGRVHGAAETLAEFIRHNPKQAVTPWLKLLEVYRAAGLRAEFDALARQLNKTFN HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCE VLAVTWENFDAARSAPASIELLPHIVANLEKLWGTRECQGYIHTLLRDNRDGTRQGFPLR EEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHH IIDELLLLAAILEQHLGPYRAEPDAPPPEAGERKAA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA