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The map label for this gene is yiaD [C]

Identifier: 119899491

GI number: 119899491

Start: 3524441

End: 3525022

Strand: Direct

Name: yiaD [C]

Synonym: azo3202

Alternate gene names: 119899491

Gene position: 3524441-3525022 (Clockwise)

Preceding gene: 119899487

Following gene: 119899492

Centisome position: 80.54

GC content: 70.62

Gene sequence:

>582_bases
ATGCGTAATCCACAATCCCTGCTCTCCGCCCTGACCGCGGCCTCCGCCGCGCTGCTGATCAGCGCCTGCGCCACCGGCGA
CGCCAACCGTCCGAGCGAAGGCGGCAGCACGCCCCCGGCCGCCGAGAAGCGCGCCGCCAGCACCGCAAAGATCGACTGGG
CCGCGCTTCAGAAAGAACTGAGCGGCGCGCTGCGCGGCGTCCAGGACGCCGAGGTCGGCGAAGCCACCGCCGACGGCATC
CATCTGCGCATCCCGGTCAGCAACGGCTTTGCCTCCGGCGGCAGCGAGCCGCGACCGGCACTGACCAAGGTGCTCGATTC
GCTGGTCGCCCCGCTCGCCGCGCGGCCCGGCGTCGGAATCAAGGTCATCGGCCATACCGACGGCCTCGGCAGCGAGATGT
ACAACCTCAAGCTCTCCATCCAGCGCGCCGAAGCGGTGATGGAATACCTGCGCAGCCGCGGTATCGCGTTCGACCGGCTG
TCGGCCGACGGCAAGGGCGAGACCGAGCCGATCGCCGACAACGCCAAGGAGGCCACCCGCGCCCGCAACCGGCGCGTCGA
GATCGTGCTGCGCGCGATCTGA

Upstream 100 bases:

>100_bases
GTCGGACGCGGCATCATCGCGTCCCTGCCGGCACCCGTGAGAAAATGCCGACGGCAACGACCGGACCGATCCTCTTTGAC
GACGTACATCCTCCACCACC

Downstream 100 bases:

>100_bases
TCCATCACGGGAGGCGAGGATGGGCGCGGGAAGCATGGCGCGCTTTGTTAAACTCGCGGCTTTGATTCCAGCCCGCCTCC
CGCCATGTCCCGCAAGATCC

Product: lipoprotein attached to the membrane by a lipid anchor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRNPQSLLSALTAASAALLISACATGDANRPSEGGSTPPAAEKRAASTAKIDWAALQKELSGALRGVQDAEVGEATADGI
HLRIPVSNGFASGGSEPRPALTKVLDSLVAPLAARPGVGIKVIGHTDGLGSEMYNLKLSIQRAEAVMEYLRSRGIAFDRL
SADGKGETEPIADNAKEATRARNRRVEIVLRAI

Sequences:

>Translated_193_residues
MRNPQSLLSALTAASAALLISACATGDANRPSEGGSTPPAAEKRAASTAKIDWAALQKELSGALRGVQDAEVGEATADGI
HLRIPVSNGFASGGSEPRPALTKVLDSLVAPLAARPGVGIKVIGHTDGLGSEMYNLKLSIQRAEAVMEYLRSRGIAFDRL
SADGKGETEPIADNAKEATRARNRRVEIVLRAI
>Mature_193_residues
MRNPQSLLSALTAASAALLISACATGDANRPSEGGSTPPAAEKRAASTAKIDWAALQKELSGALRGVQDAEVGEATADGI
HLRIPVSNGFASGGSEPRPALTKVLDSLVAPLAARPGVGIKVIGHTDGLGSEMYNLKLSIQRAEAVMEYLRSRGIAFDRL
SADGKGETEPIADNAKEATRARNRRVEIVLRAI

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=115, Percent_Identity=35.6521739130435, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787191, Length=107, Percent_Identity=37.3831775700935, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 20065; Mature: 20065

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPQSLLSALTAASAALLISACATGDANRPSEGGSTPPAAEKRAASTAKIDWAALQKEL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGALRGVQDAEVGEATADGIHLRIPVSNGFASGGSEPRPALTKVLDSLVAPLAARPGVGI
HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE
KVIGHTDGLGSEMYNLKLSIQRAEAVMEYLRSRGIAFDRLSADGKGETEPIADNAKEATR
EEEECCCCCCCHHEEHEEHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHH
ARNRRVEIVLRAI
HHCCEEEEEEECC
>Mature Secondary Structure
MRNPQSLLSALTAASAALLISACATGDANRPSEGGSTPPAAEKRAASTAKIDWAALQKEL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGALRGVQDAEVGEATADGIHLRIPVSNGFASGGSEPRPALTKVLDSLVAPLAARPGVGI
HHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE
KVIGHTDGLGSEMYNLKLSIQRAEAVMEYLRSRGIAFDRLSADGKGETEPIADNAKEATR
EEEECCCCCCCHHEEHEEHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHH
ARNRRVEIVLRAI
HHCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]