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The map label for this gene is degS [C]

Identifier: 119899477

GI number: 119899477

Start: 3500067

End: 3500861

Strand: Reverse

Name: degS [C]

Synonym: azo3187

Alternate gene names: 119899477

Gene position: 3500861-3500067 (Counterclockwise)

Preceding gene: 119899478

Following gene: 119899475

Centisome position: 80.0

GC content: 65.91

Gene sequence:

>795_bases
ATGATGCCGCTGCACGTCGGAACTGTCAGGCGCTTTCTCACCTCGGCGCTGGCGGTCCTGCTCTGTGCACTCACTGTCGC
ACCGACCGCACATGCCGATCTGGCAGACCTGCTTCCACGGATCAAGCCATCGGTGGTGGCGATCGGAACGTACCAGCGCA
CCCGCAGCCCTGCTTTTCGTTTCCTTGGCACCGGCTTCGTCGTGGGCAACGGCCGCACGGTGGCGACCAATGCTCACGTG
ATACCCGACACGCTCGCGACGGACCAGCTGGAAGCCCTGGTGGTGGTATTGCCGGGCCAGGAGCCCGGCCAGACTGCCCG
CCAGGCCACCCGGATCGCGACCGACCGCAATCATGACCTCGCGTTGTTGCGCCTCGAGGGCGAGCAGCGATTGCCGGCAT
TGCCGTTGGGCGAGGCGGAAGTGCGGGAGGGGCAGCAGATCGCCTTCACCGGCTTTCCCATCGGCAACGCGCTGGGTGTC
ACGCCGGTCACACACCGCGGCATCATCGCCGCCATCACGCCGATCGGCATTCCGCAGGGCAACGCGCGGGATCTCAACCC
CACCCTCGTACGCCGGCTGGGCGGAGGCGCGTTCCTGGTCTACCAACTGGACGCCACCGCCTATCCCGGCAACAGCGGAA
GCCCGCTGTTCGATCCGAACACCGGGACGGTCATCGGCATCGTCAATATGGTGTTCGTCAAATCGACCAAGGAAAGCGTG
TTGAGCGATCCCTCGGGGATCAGCTATGCGATTCCGGTGGAACACTTGCGGGCGCTGCTGGCGGGCGCGCCCTGA

Upstream 100 bases:

>100_bases
TTCTCGCGTTTGTCCGCACGCGCCAGCACCCGTTTGATACCCGCGTTGTCGACGCCAGCCCGATGATCCAGGCGGTGCCG
CCGCTGCCGGGGCGCGGCTC

Downstream 100 bases:

>100_bases
GGGCTGGGGCACGCGGGGGAGTGGCCTCGCCAGCAGGAATCGAACCTGCATCTCAGACTTAGGAGGTCCGTGTTCTATCC
ATTGAACTATGGCGAGGACG

Product: putative serine protease

Products: NA

Alternate protein names: Serine Protease; Peptidase; Trypsin Family Periplasmic Serine Protease

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMPLHVGTVRRFLTSALAVLLCALTVAPTAHADLADLLPRIKPSVVAIGTYQRTRSPAFRFLGTGFVVGNGRTVATNAHV
IPDTLATDQLEALVVVLPGQEPGQTARQATRIATDRNHDLALLRLEGEQRLPALPLGEAEVREGQQIAFTGFPIGNALGV
TPVTHRGIIAAITPIGIPQGNARDLNPTLVRRLGGGAFLVYQLDATAYPGNSGSPLFDPNTGTVIGIVNMVFVKSTKESV
LSDPSGISYAIPVEHLRALLAGAP

Sequences:

>Translated_264_residues
MMPLHVGTVRRFLTSALAVLLCALTVAPTAHADLADLLPRIKPSVVAIGTYQRTRSPAFRFLGTGFVVGNGRTVATNAHV
IPDTLATDQLEALVVVLPGQEPGQTARQATRIATDRNHDLALLRLEGEQRLPALPLGEAEVREGQQIAFTGFPIGNALGV
TPVTHRGIIAAITPIGIPQGNARDLNPTLVRRLGGGAFLVYQLDATAYPGNSGSPLFDPNTGTVIGIVNMVFVKSTKESV
LSDPSGISYAIPVEHLRALLAGAP
>Mature_264_residues
MMPLHVGTVRRFLTSALAVLLCALTVAPTAHADLADLLPRIKPSVVAIGTYQRTRSPAFRFLGTGFVVGNGRTVATNAHV
IPDTLATDQLEALVVVLPGQEPGQTARQATRIATDRNHDLALLRLEGEQRLPALPLGEAEVREGQQIAFTGFPIGNALGV
TPVTHRGIIAAITPIGIPQGNARDLNPTLVRRLGGGAFLVYQLDATAYPGNSGSPLFDPNTGTVIGIVNMVFVKSTKESV
LSDPSGISYAIPVEHLRALLAGAP

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 27752; Mature: 27752

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPLHVGTVRRFLTSALAVLLCALTVAPTAHADLADLLPRIKPSVVAIGTYQRTRSPAFR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCHHCCCCHHH
FLGTGFVVGNGRTVATNAHVIPDTLATDQLEALVVVLPGQEPGQTARQATRIATDRNHDL
EEECEEEEECCEEEEECCEECCCHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCE
ALLRLEGEQRLPALPLGEAEVREGQQIAFTGFPIGNALGVTPVTHRGIIAAITPIGIPQG
EEEEECCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
NARDLNPTLVRRLGGGAFLVYQLDATAYPGNSGSPLFDPNTGTVIGIVNMVFVKSTKESV
CCCCCCHHHHHHCCCCEEEEEEEECEECCCCCCCCCCCCCCCEEEEEEHHHHHHCCHHHH
LSDPSGISYAIPVEHLRALLAGAP
HCCCCCCEEEECHHHHHHHHHCCC
>Mature Secondary Structure
MMPLHVGTVRRFLTSALAVLLCALTVAPTAHADLADLLPRIKPSVVAIGTYQRTRSPAFR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCHHCCCCHHH
FLGTGFVVGNGRTVATNAHVIPDTLATDQLEALVVVLPGQEPGQTARQATRIATDRNHDL
EEECEEEEECCEEEEECCEECCCHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCE
ALLRLEGEQRLPALPLGEAEVREGQQIAFTGFPIGNALGVTPVTHRGIIAAITPIGIPQG
EEEEECCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCC
NARDLNPTLVRRLGGGAFLVYQLDATAYPGNSGSPLFDPNTGTVIGIVNMVFVKSTKESV
CCCCCCHHHHHHCCCCEEEEEEEECEECCCCCCCCCCCCCCCEEEEEEHHHHHHCCHHHH
LSDPSGISYAIPVEHLRALLAGAP
HCCCCCCEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA