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The map label for this gene is amtY [H]

Identifier: 119899305

GI number: 119899305

Start: 3313222

End: 3314586

Strand: Direct

Name: amtY [H]

Synonym: azo3015

Alternate gene names: 119899305

Gene position: 3313222-3314586 (Clockwise)

Preceding gene: 119899304

Following gene: 119899309

Centisome position: 75.71

GC content: 68.94

Gene sequence:

>1365_bases
ATGAACGATGTGCAATTCCCGACCGCAGCCGCGGCCCGACCACACCCACGCGGCACCGCGGCAACGGCGGCGCTGCTGAT
GCTCGGCCTGTCCGGCACCGCACTGGCGCAGGAAGCCGCGCCGGCCACGCTCAACAGCGGCGATACCGCCTGGATGATGG
TCTCCAGCGTGCTGGTGCTGATGATGCTGGTGCCCGGCCTCGCCCTCTTCTACGGCGGCATGGTGCGCGCCAAGAACGTG
CTGTCGGTGTTCACCCAGTGTTTCGGCGTTGCCGGCGTGATCGGCATGCTGTGGGTCATCTATGGCTACAGCATCTTTTC
CGACACCACCGGCATGGAGGCGGGCGTCGTCAACCTGCACAGCTTCATCGGCGGCTTCAAGCAGGCCATGCTCGCCAACA
TCGACCGCGCCAGCCTCACCGCCAGCATCCCGGAGAGCGTGTTCGCCACCTTCCAGATGACCTTCGCGCTGATCACCCCG
GTGATCATCGCCGGCTCCTTCGCCGAGCGCATGAAGTTCAGCGCGGTGCTGCTGTTCACCGCGCTGTGGTTCACCTTCTG
CTACGCGCCCTTGGCGCACATGGCGTGGAGCGGCCCGGGCGGCCTGCTGTGGGACTGGGGCATCCTGGAATTCGCCGGCG
GCACCGTGGTGCACATCAACGCCGGCGTCGCCGGGCTGGTCGCCGCCCTGGTGCTGGGCCGTCGCCGCGGCTATCCGCAC
GTCGCCATGCCGCCGCACAACCTGGGCTTCGCGCTGGCTGGCGCGGCGCTGCTGTGGGTGGGCTGGTTCGGCTTCAACGT
CGGCTCGGCGGTCGCCGCCAACGAGAACGCCGGCATGGCGATGCTCACCACCCAGATCGCCGCCTGCGCCGGCGTGGTCG
GCTGGCTGGTGGTGGAATGGCTCAAGGCGGGCAAGCCGAGCGCGCTGGGCGCGGCCTCCGGCGCCCTCGCCGGCCTGGTG
GCGATCACCCCGGCCTGCGGCTTCGTCGGTCCGTCCGGCGCGCTGTACATGGGGCTGATCACCGGCGCCGTCTGCTTCTT
CGCCATCGGCTGGCTCAAGCGCAAGCTGGGCTATGACGACAGCCTGGACGCCTTCGGCCTGCACGGCATCGGCGGCATCG
TCGGCTCGCTGCTGACCGGGGTCTTCGCGTCGAAGAGCCTGGGCGGCTTCCAGGACATCGAGATCGCCAGCCAGGTGCAG
ATCCAGGCCCAGAGCGTGCTCTTCACGGTGCTGTACTGCGCGATCGTCACCTGGGTGCTGCTGAAGCTCACCGGGCTGGT
CACCCGTGGCCTGCGGGTGAGCGCGGACGACGAGCAGGAAGGGCTGGACCAGAGCCAGCACAACGAGCGCGCCTACAACG
TCTGA

Upstream 100 bases:

>100_bases
TCGGCGACGGCAAGATGTTCGTGACCACCGTCGACCAGACCATCCGCATCCGCACCGGCGAGTCCGGTGCCGACGCCCTC
TGATGCCAAGGAGCCTCTTC

Downstream 100 bases:

>100_bases
GCGCGCTCGCGGTTCGCCCCCGGCAGCACAGGGGGCGAACCGCGCCGGCGGCCGCGCTTACCGCGCCGGCGCCGGCTCCG
CCGCCACCGCCACCACCGCG

Product: ammonium transporter

Products: NH3 [Cytoplasm] [C]

Alternate protein names: Ammonia transporter [H]

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNDVQFPTAAAARPHPRGTAATAALLMLGLSGTALAQEAAPATLNSGDTAWMMVSSVLVLMMLVPGLALFYGGMVRAKNV
LSVFTQCFGVAGVIGMLWVIYGYSIFSDTTGMEAGVVNLHSFIGGFKQAMLANIDRASLTASIPESVFATFQMTFALITP
VIIAGSFAERMKFSAVLLFTALWFTFCYAPLAHMAWSGPGGLLWDWGILEFAGGTVVHINAGVAGLVAALVLGRRRGYPH
VAMPPHNLGFALAGAALLWVGWFGFNVGSAVAANENAGMAMLTTQIAACAGVVGWLVVEWLKAGKPSALGAASGALAGLV
AITPACGFVGPSGALYMGLITGAVCFFAIGWLKRKLGYDDSLDAFGLHGIGGIVGSLLTGVFASKSLGGFQDIEIASQVQ
IQAQSVLFTVLYCAIVTWVLLKLTGLVTRGLRVSADDEQEGLDQSQHNERAYNV

Sequences:

>Translated_454_residues
MNDVQFPTAAAARPHPRGTAATAALLMLGLSGTALAQEAAPATLNSGDTAWMMVSSVLVLMMLVPGLALFYGGMVRAKNV
LSVFTQCFGVAGVIGMLWVIYGYSIFSDTTGMEAGVVNLHSFIGGFKQAMLANIDRASLTASIPESVFATFQMTFALITP
VIIAGSFAERMKFSAVLLFTALWFTFCYAPLAHMAWSGPGGLLWDWGILEFAGGTVVHINAGVAGLVAALVLGRRRGYPH
VAMPPHNLGFALAGAALLWVGWFGFNVGSAVAANENAGMAMLTTQIAACAGVVGWLVVEWLKAGKPSALGAASGALAGLV
AITPACGFVGPSGALYMGLITGAVCFFAIGWLKRKLGYDDSLDAFGLHGIGGIVGSLLTGVFASKSLGGFQDIEIASQVQ
IQAQSVLFTVLYCAIVTWVLLKLTGLVTRGLRVSADDEQEGLDQSQHNERAYNV
>Mature_454_residues
MNDVQFPTAAAARPHPRGTAATAALLMLGLSGTALAQEAAPATLNSGDTAWMMVSSVLVLMMLVPGLALFYGGMVRAKNV
LSVFTQCFGVAGVIGMLWVIYGYSIFSDTTGMEAGVVNLHSFIGGFKQAMLANIDRASLTASIPESVFATFQMTFALITP
VIIAGSFAERMKFSAVLLFTALWFTFCYAPLAHMAWSGPGGLLWDWGILEFAGGTVVHINAGVAGLVAALVLGRRRGYPH
VAMPPHNLGFALAGAALLWVGWFGFNVGSAVAANENAGMAMLTTQIAACAGVVGWLVVEWLKAGKPSALGAASGALAGLV
AITPACGFVGPSGALYMGLITGAVCFFAIGWLKRKLGYDDSLDAFGLHGIGGIVGSLLTGVFASKSLGGFQDIEIASQVQ
IQAQSVLFTVLYCAIVTWVLLKLTGLVTRGLRVSADDEQEGLDQSQHNERAYNV

Specific function: Involved in the uptake of ammonia [H]

COG id: COG0004

COG function: function code P; Ammonia permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI1786656, Length=419, Percent_Identity=46.3007159904535, Blast_Score=367, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17550182, Length=448, Percent_Identity=26.1160714285714, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI133931100, Length=453, Percent_Identity=26.9315673289183, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17550180, Length=449, Percent_Identity=26.2806236080178, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI32564042, Length=432, Percent_Identity=26.6203703703704, Blast_Score=94, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6325396, Length=427, Percent_Identity=35.1288056206089, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6324187, Length=426, Percent_Identity=34.5070422535211, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6321559, Length=436, Percent_Identity=31.651376146789, Blast_Score=201, Evalue=2e-52,
Organism=Drosophila melanogaster, GI161078314, Length=435, Percent_Identity=25.7471264367816, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 47343; Mature: 47343

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVQFPTAAAARPHPRGTAATAALLMLGLSGTALAQEAAPATLNSGDTAWMMVSSVLVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH
MMLVPGLALFYGGMVRAKNVLSVFTQCFGVAGVIGMLWVIYGYSIFSDTTGMEAGVVNLH
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
SFIGGFKQAMLANIDRASLTASIPESVFATFQMTFALITPVIIAGSFAERMKFSAVLLFT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALWFTFCYAPLAHMAWSGPGGLLWDWGILEFAGGTVVHINAGVAGLVAALVLGRRRGYPH
HHHHHHHHHHHHHHHCCCCCCCEECCHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCC
VAMPPHNLGFALAGAALLWVGWFGFNVGSAVAANENAGMAMLTTQIAACAGVVGWLVVEW
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKAGKPSALGAASGALAGLVAITPACGFVGPSGALYMGLITGAVCFFAIGWLKRKLGYDD
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLDAFGLHGIGGIVGSLLTGVFASKSLGGFQDIEIASQVQIQAQSVLFTVLYCAIVTWVL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLTGLVTRGLRVSADDEQEGLDQSQHNERAYNV
HHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHCCCCCCCCCHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NH3 [Periplasm] [C]

Specific reaction: NH3 [Periplasm] = NH3 [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]