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The map label for this gene is feaR [H]

Identifier: 119899309

GI number: 119899309

Start: 3317346

End: 3318281

Strand: Direct

Name: feaR [H]

Synonym: azo3019

Alternate gene names: 119899309

Gene position: 3317346-3318281 (Clockwise)

Preceding gene: 119899305

Following gene: 119899310

Centisome position: 75.81

GC content: 72.65

Gene sequence:

>936_bases
ATGGACGCAGGTCGCAGCCCCATCCTCCGCATGCAGGAGACCCGCCACGACAACTGGCGGGAGACGGTGGCGTCGCAGTT
CCTGCCGCTGGATTTCGAGGTGGCGCGCACTACCCGCTTTCATGGGCGCGGGCTGTGGGCGCAGGTGGATCAGGCGCGCG
CCGCCGAGATCCGCATGTGCGAACACCGCGTCACCCGCCAACGCAGCCACCTCGCCGCCGCCGACGGCCCGGCGGTGAAG
CTGCTGTGGCTGCTCAGCGGCAGCGGCCGGCTGCAGCAGAACGGCGGCGAGTGTTCGCTGCAGGCCGAGCGCTGGCTGTT
CTACGACGCCATCCACCCCTATTCGCTGCAGCTGTCCGAAGACGCCCGCTTCATCTCCCTGCTGTACACCGGCAACAGCG
CCGAGCGCTGGATGCGGCTGGCGCGCGACCTCGGCAGCGCGCCGCGCCAGACCGCCGGCCCGGCCCGCATCGCCCTGCTG
GCGCTGCGCGGCGCGATGCGCGAACGCGACGGACTGGACGGGCTCGCCCAGCGCGCCCTGCTCGAATCGGTGCTGGCGCT
GACCGAAAGCGCGCTGCGCACGGCCCTGCCCGAACAGGGCGGCCGCCAGCGCGACGCGCTGCGGCTGGTCGAAGCCCGCC
GTTTCGTGCTGCAGCACCTCGCCAACGCCGAACTCGGCCCCGACGACATCGCCCGCGCGCTCCATGTGTCGCGCCGCAGC
CTCTACAACCTCTTCGCCGAAGCCGGCCTGCGCCCGCGCGAGTTCGTCCGCAACCTGCGCCTGGAAAAAGCCTGCGAGGC
ACTCGCCCGCCCCGCTGGCGACAGCATCACCACGATCGCGCTCGACCACGGCTTCACCGACGCCGCCCACTTCAGCCGCA
GCTTCCGCGAGCGCTTCGGCGTCAGCCCGAGCGCCTACCGCGGCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
GGCAGTCCATCGGAGGAGAAGTGCCGACCGGCACCGGGATAGCGCGGCGACGAATGCCGCCGGAGCCGCTGCCGTCACTT
CCCAACCCGAGAGGCCGCCC

Downstream 100 bases:

>100_bases
ACACCCGCCCGTCCGCGCGACCACCCGGCAGAGTTTCGCCGCCGTGCCGCCGGTGCACGGCCAGACATGCGTCCTGCACG
CCATGGCAAGCGCCCGGCCG

Product: putative AraC-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDAGRSPILRMQETRHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMCEHRVTRQRSHLAAADGPAVK
LLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSEDARFISLLYTGNSAERWMRLARDLGSAPRQTAGPARIALL
ALRGAMRERDGLDGLAQRALLESVLALTESALRTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRS
LYNLFAEAGLRPREFVRNLRLEKACEALARPAGDSITTIALDHGFTDAAHFSRSFRERFGVSPSAYRGRGG

Sequences:

>Translated_311_residues
MDAGRSPILRMQETRHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMCEHRVTRQRSHLAAADGPAVK
LLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSEDARFISLLYTGNSAERWMRLARDLGSAPRQTAGPARIALL
ALRGAMRERDGLDGLAQRALLESVLALTESALRTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRS
LYNLFAEAGLRPREFVRNLRLEKACEALARPAGDSITTIALDHGFTDAAHFSRSFRERFGVSPSAYRGRGG
>Mature_311_residues
MDAGRSPILRMQETRHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMCEHRVTRQRSHLAAADGPAVK
LLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSEDARFISLLYTGNSAERWMRLARDLGSAPRQTAGPARIALL
ALRGAMRERDGLDGLAQRALLESVLALTESALRTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRS
LYNLFAEAGLRPREFVRNLRLEKACEALARPAGDSITTIALDHGFTDAAHFSRSFRERFGVSPSAYRGRGG

Specific function: Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787649, Length=246, Percent_Identity=26.0162601626016, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34803; Mature: 34803

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAGRSPILRMQETRHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMC
CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EHRVTRQRSHLAAADGPAVKLLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSE
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEHHHEEEEECCCCCEEEECC
DARFISLLYTGNSAERWMRLARDLGSAPRQTAGPARIALLALRGAMRERDGLDGLAQRAL
CCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LESVLALTESALRTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LYNLFAEAGLRPREFVRNLRLEKACEALARPAGDSITTIALDHGFTDAAHFSRSFRERFG
HHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC
VSPSAYRGRGG
CCCCCCCCCCC
>Mature Secondary Structure
MDAGRSPILRMQETRHDNWRETVASQFLPLDFEVARTTRFHGRGLWAQVDQARAAEIRMC
CCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
EHRVTRQRSHLAAADGPAVKLLWLLSGSGRLQQNGGECSLQAERWLFYDAIHPYSLQLSE
HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEEEEHHHEEEEECCCCCEEEECC
DARFISLLYTGNSAERWMRLARDLGSAPRQTAGPARIALLALRGAMRERDGLDGLAQRAL
CCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
LESVLALTESALRTALPEQGGRQRDALRLVEARRFVLQHLANAELGPDDIARALHVSRRS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LYNLFAEAGLRPREFVRNLRLEKACEALARPAGDSITTIALDHGFTDAAHFSRSFRERFG
HHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC
VSPSAYRGRGG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631685; 9043126; 9278503; 9109378 [H]