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The map label for this gene is yiaN [C]

Identifier: 119899086

GI number: 119899086

Start: 3078912

End: 3080594

Strand: Reverse

Name: yiaN [C]

Synonym: azo2796

Alternate gene names: 119899086

Gene position: 3080594-3078912 (Counterclockwise)

Preceding gene: 119899087

Following gene: 119899083

Centisome position: 70.4

GC content: 65.42

Gene sequence:

>1683_bases
ATGACCGAGTTCCTGATCGCCAACATGGCGCCGGTGATGTTCGCGGCGCTGGTGTTCTTCCTGCTGATGGGCTTTCCGGT
CGCATTCGCGCTCGCGGCCAACGGCATCGTGTTCGGCCTCATCGGCATCGAACTCGGGCTGCTCAGCCCGGCGCTGTTCC
AGGCCCTGCCGGAGCGCATCTTCGGCATCATGGCCAACGACACGCTGCTGGCCATTCCCTTCTTCACCTTCATGGGGCTG
ATTCTCGAACGCAGCGGCATGGCGGAGGATCTGCTGGATACCATTGGCCAGCTGTTCGGGCCGATCCGTGGCGGTCTTGC
CTACGCGGTGATCTTCGTCGGCGCGTTGCTGGCGGCCACCACCGGCGTGGTCGCGGCTTCGGTCATCTCGATGGGCCTGA
TCTCGCTGCCCATCATGCTGCGCTACGGTTACGACCACCGCCTGGCCTCGGGCGTGATCGCGGCGTCCGGTACGCTGGCC
CAGATCATCCCGCCGTCGCTGGTGCTGATCATCATGGCCGACCAGCTCGGCCGCTCCGTGGGCGACATGTACCAGGGCGC
CTTGCTGCCCGGTCTGGTGCTGACCGGCCTTTACTTCGGCTACGTCTTCCTCGTCACGCTGTTCCGGCCCAAGTTCGCGC
CAGCGATGCCGCTGGAGGCACGCACGATCCGCGAGGCCGACGGCACTTCGGGGCTGCGTTCGCTGACGGTGCTGTTCGTG
ATCTCGGTGGCGGCGGCGGTGGCCTTCGCCAAGACCTGGGGTGTGGGCAAGCCGACCGACGAGGTGGTGGTGATTTCCTC
GCTGGTGGCGATCGGCGTCGCCTTCATCGCATCGGTGATCAACCGCCTGTTCAAGCTCGGCCTGCTGTCGAAGATGGCCG
AACGCGTCACCTTCGTGCTGATTCCGCCGCTCGGGCTGATCTTCCTCGTGCTCGGCACCATTTTCCTCGGCATCGCCACC
CCCACCGAAGGCGGCGCCATGGGTGCCGTGGGCGCGGTGCTGATGGCGATGTCGCGCGGGCGCTTGAGCTTTGCGCTGAC
CAAGCAGGCGATGGACGTCACCACCAAGCTGTCGTGCTTCGTGGTCTTCATCCTGATCGGTTCCACGGTGTTCGGCCTCA
CCTTCCGCGGCGTCAATGGCGACCTGTGGGTGGAACACCTGCTGACCGCGCTCCCCGGCGGCCAGACCGGCTTCCTGATC
GCGGTGAACATCCTCGTATTCGTGCTCGCGTTCTTCCTCGATTTCTTCGAGCTGGCCTTCATCATCGTGCCGCTGCTGGC
GCCGGTGGCGGACAAGCTGGGCATCGACCTGATCTGGTTCGGCGTGCTGCTGGCGGTGAACATGCAGACTTCGTTCATGC
ACCCGCCCTTCGGCTTCGCGCTGTTCTACCTGCGCTCGGTCGCTCCACCCAAGATCAAGACCACCGAGATCTACTGGGGC
GCGGTGCCGTTCGTGTGCATCCAGATCGTCATGGTGGCGCTGATCATCATGTTCCCCAACATCGTCTCGTACGACCACGG
CAAGGCGAAGACCGCGCCCACCGAGTTGCAGCTGCAGCTGCCGGGCGTCGGCGGCGATACGCCAAGCGGCGAGTCCGAAG
GTGCTGGCGCGGGCGGCAGCAGCGGCGGACCCAGTCTGGATCTGTTGCAGCAACTGCAGCAACAGGGCGGCGGCGGTCGC
TGA

Upstream 100 bases:

>100_bases
TCACCGGGCATGGCCCCAACGTGCTGGTCAAGCACGGTGCGCCTTCCGCCGAGGAAGAGCTGGCCGCCGCGATCAAGCAG
CAGGCCCCGGGAGGTGCGCA

Downstream 100 bases:

>100_bases
TCCGCAGCGGCAAAAGACATCGGGGCCCTTCAGGGCCCCTTTTTTTTGGGGGGGCTGGTCGGTGATGTGGCCGGGATTGC
CGCGGAAGCGCGGTGCATCG

Product: putative large permease of TRAP-type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MTEFLIANMAPVMFAALVFFLLMGFPVAFALAANGIVFGLIGIELGLLSPALFQALPERIFGIMANDTLLAIPFFTFMGL
ILERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDHRLASGVIAASGTLA
QIIPPSLVLIIMADQLGRSVGDMYQGALLPGLVLTGLYFGYVFLVTLFRPKFAPAMPLEARTIREADGTSGLRSLTVLFV
ISVAAAVAFAKTWGVGKPTDEVVVISSLVAIGVAFIASVINRLFKLGLLSKMAERVTFVLIPPLGLIFLVLGTIFLGIAT
PTEGGAMGAVGAVLMAMSRGRLSFALTKQAMDVTTKLSCFVVFILIGSTVFGLTFRGVNGDLWVEHLLTALPGGQTGFLI
AVNILVFVLAFFLDFFELAFIIVPLLAPVADKLGIDLIWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPPKIKTTEIYWG
AVPFVCIQIVMVALIIMFPNIVSYDHGKAKTAPTELQLQLPGVGGDTPSGESEGAGAGGSSGGPSLDLLQQLQQQGGGGR

Sequences:

>Translated_560_residues
MTEFLIANMAPVMFAALVFFLLMGFPVAFALAANGIVFGLIGIELGLLSPALFQALPERIFGIMANDTLLAIPFFTFMGL
ILERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDHRLASGVIAASGTLA
QIIPPSLVLIIMADQLGRSVGDMYQGALLPGLVLTGLYFGYVFLVTLFRPKFAPAMPLEARTIREADGTSGLRSLTVLFV
ISVAAAVAFAKTWGVGKPTDEVVVISSLVAIGVAFIASVINRLFKLGLLSKMAERVTFVLIPPLGLIFLVLGTIFLGIAT
PTEGGAMGAVGAVLMAMSRGRLSFALTKQAMDVTTKLSCFVVFILIGSTVFGLTFRGVNGDLWVEHLLTALPGGQTGFLI
AVNILVFVLAFFLDFFELAFIIVPLLAPVADKLGIDLIWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPPKIKTTEIYWG
AVPFVCIQIVMVALIIMFPNIVSYDHGKAKTAPTELQLQLPGVGGDTPSGESEGAGAGGSSGGPSLDLLQQLQQQGGGGR
>Mature_559_residues
TEFLIANMAPVMFAALVFFLLMGFPVAFALAANGIVFGLIGIELGLLSPALFQALPERIFGIMANDTLLAIPFFTFMGLI
LERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDHRLASGVIAASGTLAQ
IIPPSLVLIIMADQLGRSVGDMYQGALLPGLVLTGLYFGYVFLVTLFRPKFAPAMPLEARTIREADGTSGLRSLTVLFVI
SVAAAVAFAKTWGVGKPTDEVVVISSLVAIGVAFIASVINRLFKLGLLSKMAERVTFVLIPPLGLIFLVLGTIFLGIATP
TEGGAMGAVGAVLMAMSRGRLSFALTKQAMDVTTKLSCFVVFILIGSTVFGLTFRGVNGDLWVEHLLTALPGGQTGFLIA
VNILVFVLAFFLDFFELAFIIVPLLAPVADKLGIDLIWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPPKIKTTEIYWGA
VPFVCIQIVMVALIIMFPNIVSYDHGKAKTAPTELQLQLPGVGGDTPSGESEGAGAGGSSGGPSLDLLQQLQQQGGGGR

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 59068; Mature: 58937

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFLIANMAPVMFAALVFFLLMGFPVAFALAANGIVFGLIGIELGLLSPALFQALPERI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
FGIMANDTLLAIPFFTFMGLILERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVGALLAAT
HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVVAASVISMGLISLPIMLRYGYDHRLASGVIAASGTLAQIIPPSLVLIIMADQLGRSV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
GDMYQGALLPGLVLTGLYFGYVFLVTLFRPKFAPAMPLEARTIREADGTSGLRSLTVLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
ISVAAAVAFAKTWGVGKPTDEVVVISSLVAIGVAFIASVINRLFKLGLLSKMAERVTFVL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
IPPLGLIFLVLGTIFLGIATPTEGGAMGAVGAVLMAMSRGRLSFALTKQAMDVTTKLSCF
ECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VVFILIGSTVFGLTFRGVNGDLWVEHLLTALPGGQTGFLIAVNILVFVLAFFLDFFELAF
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIVPLLAPVADKLGIDLIWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPPKIKTTEIYWG
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
AVPFVCIQIVMVALIIMFPNIVSYDHGKAKTAPTELQLQLPGVGGDTPSGESEGAGAGGS
CHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
SGGPSLDLLQQLQQQGGGGR
CCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TEFLIANMAPVMFAALVFFLLMGFPVAFALAANGIVFGLIGIELGLLSPALFQALPERI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH
FGIMANDTLLAIPFFTFMGLILERSGMAEDLLDTIGQLFGPIRGGLAYAVIFVGALLAAT
HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVVAASVISMGLISLPIMLRYGYDHRLASGVIAASGTLAQIIPPSLVLIIMADQLGRSV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCCHHHHCCHHHHHHHHHHHHHHHH
GDMYQGALLPGLVLTGLYFGYVFLVTLFRPKFAPAMPLEARTIREADGTSGLRSLTVLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
ISVAAAVAFAKTWGVGKPTDEVVVISSLVAIGVAFIASVINRLFKLGLLSKMAERVTFVL
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
IPPLGLIFLVLGTIFLGIATPTEGGAMGAVGAVLMAMSRGRLSFALTKQAMDVTTKLSCF
ECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VVFILIGSTVFGLTFRGVNGDLWVEHLLTALPGGQTGFLIAVNILVFVLAFFLDFFELAF
HHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIVPLLAPVADKLGIDLIWFGVLLAVNMQTSFMHPPFGFALFYLRSVAPPKIKTTEIYWG
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
AVPFVCIQIVMVALIIMFPNIVSYDHGKAKTAPTELQLQLPGVGGDTPSGESEGAGAGGS
CHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
SGGPSLDLLQQLQQQGGGGR
CCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]