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The map label for this gene is infA1

Identifier: 119898893

GI number: 119898893

Start: 2886484

End: 2886741

Strand: Reverse

Name: infA1

Synonym: azo2602

Alternate gene names: 119898893

Gene position: 2886741-2886484 (Counterclockwise)

Preceding gene: 119898894

Following gene: 119898892

Centisome position: 65.97

GC content: 62.4

Gene sequence:

>258_bases
ATGGCAAAAGAAGAACTGCTTGAAATGAGCGGCACGGTGCTCGAAGTGCTGCCGGACGCCCGCTACCGCGTGACCCTCGA
CAACGGCCACAGCCTGGTCGCCTACGGCGCGGGCAAGATGCGCAAGCACCACATCCGCATCATCGCCGGCGACAAGGTCC
TGCTCGAACTGTCGCCCTACGACCTCAGCAAGGGTCGCATCACCTTCCGTCATATCGAAGGCCGCGCGCCGATGACGAGC
CGTCATCAAAAGCGCTGA

Upstream 100 bases:

>100_bases
GCAGCAGGGGGTGTTCCCGTCTGCGGTTCGCCCCCCACTCCGAAAAGAAACCCGGCTTCGGTCGGGTTTTTTTATTTCTG
CCTTTTCTGGAGATTTCCCC

Downstream 100 bases:

>100_bases
TCCAAAGCGCGCACTGCAGGGTGCAGGGGACACTGGTCCAGTACTTGCTGCTCATCGGGCCGAACGCGCCTGACGCGAAG
CCCGCGGGCTGCAGGGCCGG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MAKEELLEMSGTVLEVLPDARYRVTLDNGHSLVAYGAGKMRKHHIRIIAGDKVLLELSPYDLSKGRITFRHIEGRAPMTS
RHQKR

Sequences:

>Translated_85_residues
MAKEELLEMSGTVLEVLPDARYRVTLDNGHSLVAYGAGKMRKHHIRIIAGDKVLLELSPYDLSKGRITFRHIEGRAPMTS
RHQKR
>Mature_84_residues
AKEELLEMSGTVLEVLPDARYRVTLDNGHSLVAYGAGKMRKHHIRIIAGDKVLLELSPYDLSKGRITFRHIEGRAPMTSR
HQKR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=64.2857142857143, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF11_AZOSB (A1K8R4)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_934106.1
- ProteinModelPortal:   A1K8R4
- SMR:   A1K8R4
- STRING:   A1K8R4
- GeneID:   4607503
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo2602
- eggNOG:   COG0361
- HOGENOM:   HBG286099
- OMA:   VQLDAGH
- BioCyc:   ASP62928:AZO2602-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 9667; Mature: 9536

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEELLEMSGTVLEVLPDARYRVTLDNGHSLVAYGAGKMRKHHIRIIAGDKVLLELSPY
CCHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCEEEEEECCC
DLSKGRITFRHIEGRAPMTSRHQKR
CCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AKEELLEMSGTVLEVLPDARYRVTLDNGHSLVAYGAGKMRKHHIRIIAGDKVLLELSPY
CHHHHHHHCCCEEEECCCCEEEEEECCCCEEEEECCCCCCEEEEEEEECCEEEEEECCC
DLSKGRITFRHIEGRAPMTSRHQKR
CCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA