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The map label for this gene is fliC1 [H]

Identifier: 119898824

GI number: 119898824

Start: 2799878

End: 2801560

Strand: Direct

Name: fliC1 [H]

Synonym: azo2533

Alternate gene names: 119898824

Gene position: 2799878-2801560 (Clockwise)

Preceding gene: 119898823

Following gene: 119898837

Centisome position: 63.98

GC content: 67.97

Gene sequence:

>1683_bases
ATGCGAATCCAGACCAACACCGCCACGTTGTTCTCGCAGCGCCAGTTGACCCAGTCCTCGCAAGGGCTGGCGACCAGCCT
GCAGCGGCTGTCGTCCGGCCTGCGCATCAATTCCGCCAAGGATGACGCCGCGGGGCTGGCGATCAGCGAGCGCATGACCG
CACAGATCAAGGGTCTGAACCAGGCGCGGCGCAACGCCAACGACAGCATCTCGCTGCTGATGACCGCCGAAGGCGCGATG
GGCAGCGTGTCGGACGCGCTGCAGCGAGTGCGCGAACTCGCCGTGCAGGCGGCCAACGCCACCAACTCCGCCAGCGACAA
GGCGGCGCTGCAGCAGGAGGTCAACCAGCTGCTGCAGGGCGTGGACCGGATCGGCACCCATACCCAATTCAACGGCCAGA
AGCTGTTCTCGCAGGGACGCAGTTCCATCGGCGGCGACCCCGACAAGCGTGCGGTGCTCGACAGCCTGCAGGACTGGGCC
GGCGCCGCGACCGAACGCATCCGCGACTTCTACGGTCTGCAGGGCGACGGCGCCGACATGGAGGTGAACCTGTACGAGGA
TGCCGCCGGCGGCGTGCTCGCCTCGGTGAGCTACGTGGGCGTGGATGGCCAGGGCCGCTCGCTCAACCTCACGCTCAACA
TCGACATGGCGGATTTCGTGCCGGCCAATCCGCCCAACGGCGGCTCGGCGCCGATGTACAACGACCGCATCATCACGCAC
GAGATGGTGCACGCGGTGATGGGCCGCACGATGAACTTCGCCTCGCTGCCCAGCTGGTTCAAGGAAGGCGCGGCGGAATA
CATCCACGGCGCCGACGAACGCGTGGCCGGCGACCTGCTCGGCGGCGGCACCTACGCCGCCAACCTGACTGCGGTGTCGG
GCGCCTTCGCGGCGGACGACGTCTCCGGTTCGCCCGGCTATTCCGCCGGCTACCTGGCGATGCGTTTCATGGACCGCGGC
ATGGGCGTGAAGGCGGTGATGGCGCGGCTCGCGGCCGGCGACACGCTGGACCAGGCGATCAACAGCGCCAGCGGCGGCAC
CTACGCCAACGAGGCCGCCTTCAAGGCGGCGGTGAATTCCGCCTTCGCCAGCATCGACACCACCAGCCAGGCCAGCGTCA
CCGCCTCGCTCAAGTCCGCCTTCGGCGTCGATCTGTCGAACAGCGATACCGGCGCAATCGGCGGTGCAGACGCCAATGGC
GGCAACACCTACACCGCGGCCAGCATCGTCGCCGACAGCGGCAGCTTCTTCGGCTTCAACCTGAAAATGCCGGAAATCGG
CGGCGGTGCCGGCCAGAACGAGTTCATCTTCCAGGTGGGTGCCAAGGGCGGCGAGGACATCACCGCGATGATCGGAGCGA
TGAACATCGGCGCGCTCGGTCTCGCCGGCACCGACCTCACCACCAGCCCGCAGAGCGCGATCCGCGCGGTGGACCGCGCA
CTCGACTATGTGAACCGGCAGCGCGCGCGCGTTGGCGCACTGCAGTCGCGCATGGAATCCACCATCTCGCGGCTGGAAAA
CGCGGCCGAGAACGCCAGCGCCTCGCGCTCGCGCATCCGCGACACCGACTTCGCCGCCGAAACCGCCAACCTCACCCGGC
AGACCATCCTGCAGAACGCCGGCATTGCGATGACCACCCAGGCCAACGCCATCCCGCAGCTCGCGCTGCAGCTGCTCGGC
TAA

Upstream 100 bases:

>100_bases
CGGGCGGCCCGCGGAGTTGTAACCGAAGTGCTAAATATTCGCCGAGGGCGGCCGATATGAGGCTCGACGCAATCATGCGA
GCCGAGTTTCCCCGCCTTCG

Downstream 100 bases:

>100_bases
CCCGCCGCTATCGGCGCGCTTGCCCGCAGCACGCCCACCACCACGCTGAGGGTGACGAAGGAGGCAACCGTGGTCACCAC
CAGCGCCGCCGAGCACATTC

Product: putative flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MRIQTNTATLFSQRQLTQSSQGLATSLQRLSSGLRINSAKDDAAGLAISERMTAQIKGLNQARRNANDSISLLMTAEGAM
GSVSDALQRVRELAVQAANATNSASDKAALQQEVNQLLQGVDRIGTHTQFNGQKLFSQGRSSIGGDPDKRAVLDSLQDWA
GAATERIRDFYGLQGDGADMEVNLYEDAAGGVLASVSYVGVDGQGRSLNLTLNIDMADFVPANPPNGGSAPMYNDRIITH
EMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTAVSGAFAADDVSGSPGYSAGYLAMRFMDRG
MGVKAVMARLAAGDTLDQAINSASGGTYANEAAFKAAVNSAFASIDTTSQASVTASLKSAFGVDLSNSDTGAIGGADANG
GNTYTAASIVADSGSFFGFNLKMPEIGGGAGQNEFIFQVGAKGGEDITAMIGAMNIGALGLAGTDLTTSPQSAIRAVDRA
LDYVNRQRARVGALQSRMESTISRLENAAENASASRSRIRDTDFAAETANLTRQTILQNAGIAMTTQANAIPQLALQLLG

Sequences:

>Translated_560_residues
MRIQTNTATLFSQRQLTQSSQGLATSLQRLSSGLRINSAKDDAAGLAISERMTAQIKGLNQARRNANDSISLLMTAEGAM
GSVSDALQRVRELAVQAANATNSASDKAALQQEVNQLLQGVDRIGTHTQFNGQKLFSQGRSSIGGDPDKRAVLDSLQDWA
GAATERIRDFYGLQGDGADMEVNLYEDAAGGVLASVSYVGVDGQGRSLNLTLNIDMADFVPANPPNGGSAPMYNDRIITH
EMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTAVSGAFAADDVSGSPGYSAGYLAMRFMDRG
MGVKAVMARLAAGDTLDQAINSASGGTYANEAAFKAAVNSAFASIDTTSQASVTASLKSAFGVDLSNSDTGAIGGADANG
GNTYTAASIVADSGSFFGFNLKMPEIGGGAGQNEFIFQVGAKGGEDITAMIGAMNIGALGLAGTDLTTSPQSAIRAVDRA
LDYVNRQRARVGALQSRMESTISRLENAAENASASRSRIRDTDFAAETANLTRQTILQNAGIAMTTQANAIPQLALQLLG
>Mature_560_residues
MRIQTNTATLFSQRQLTQSSQGLATSLQRLSSGLRINSAKDDAAGLAISERMTAQIKGLNQARRNANDSISLLMTAEGAM
GSVSDALQRVRELAVQAANATNSASDKAALQQEVNQLLQGVDRIGTHTQFNGQKLFSQGRSSIGGDPDKRAVLDSLQDWA
GAATERIRDFYGLQGDGADMEVNLYEDAAGGVLASVSYVGVDGQGRSLNLTLNIDMADFVPANPPNGGSAPMYNDRIITH
EMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTAVSGAFAADDVSGSPGYSAGYLAMRFMDRG
MGVKAVMARLAAGDTLDQAINSASGGTYANEAAFKAAVNSAFASIDTTSQASVTASLKSAFGVDLSNSDTGAIGGADANG
GNTYTAASIVADSGSFFGFNLKMPEIGGGAGQNEFIFQVGAKGGEDITAMIGAMNIGALGLAGTDLTTSPQSAIRAVDRA
LDYVNRQRARVGALQSRMESTISRLENAAENASASRSRIRDTDFAAETANLTRQTILQNAGIAMTTQANAIPQLALQLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=158, Percent_Identity=46.8354430379747, Blast_Score=142, Evalue=4e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 58152; Mature: 58152

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQTNTATLFSQRQLTQSSQGLATSLQRLSSGLRINSAKDDAAGLAISERMTAQIKGLN
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHCCHHHHHHHHHHHHHH
QARRNANDSISLLMTAEGAMGSVSDALQRVRELAVQAANATNSASDKAALQQEVNQLLQG
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VDRIGTHTQFNGQKLFSQGRSSIGGDPDKRAVLDSLQDWAGAATERIRDFYGLQGDGADM
HHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
EVNLYEDAAGGVLASVSYVGVDGQGRSLNLTLNIDMADFVPANPPNGGSAPMYNDRIITH
EEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECHHHCCCCCCCCCCCCCCCCCCHHHH
EMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTAVSGAFAADD
HHHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHCCCCCCCC
VSGSPGYSAGYLAMRFMDRGMGVKAVMARLAAGDTLDQAINSASGGTYANEAAFKAAVNS
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
AFASIDTTSQASVTASLKSAFGVDLSNSDTGAIGGADANGGNTYTAASIVADSGSFFGFN
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEE
LKMPEIGGGAGQNEFIFQVGAKGGEDITAMIGAMNIGALGLAGTDLTTSPQSAIRAVDRA
EECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH
LDYVNRQRARVGALQSRMESTISRLENAAENASASRSRIRDTDFAAETANLTRQTILQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC
GIAMTTQANAIPQLALQLLG
CEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MRIQTNTATLFSQRQLTQSSQGLATSLQRLSSGLRINSAKDDAAGLAISERMTAQIKGLN
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHCCHHHHHHHHHHHHHH
QARRNANDSISLLMTAEGAMGSVSDALQRVRELAVQAANATNSASDKAALQQEVNQLLQG
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
VDRIGTHTQFNGQKLFSQGRSSIGGDPDKRAVLDSLQDWAGAATERIRDFYGLQGDGADM
HHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
EVNLYEDAAGGVLASVSYVGVDGQGRSLNLTLNIDMADFVPANPPNGGSAPMYNDRIITH
EEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECHHHCCCCCCCCCCCCCCCCCCHHHH
EMVHAVMGRTMNFASLPSWFKEGAAEYIHGADERVAGDLLGGGTYAANLTAVSGAFAADD
HHHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHCCCCCCCC
VSGSPGYSAGYLAMRFMDRGMGVKAVMARLAAGDTLDQAINSASGGTYANEAAFKAAVNS
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
AFASIDTTSQASVTASLKSAFGVDLSNSDTGAIGGADANGGNTYTAASIVADSGSFFGFN
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEE
LKMPEIGGGAGQNEFIFQVGAKGGEDITAMIGAMNIGALGLAGTDLTTSPQSAIRAVDRA
EECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH
LDYVNRQRARVGALQSRMESTISRLENAAENASASRSRIRDTDFAAETANLTRQTILQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCC
GIAMTTQANAIPQLALQLLG
CEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8562027 [H]