| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is prc [H]
Identifier: 119898629
GI number: 119898629
Start: 2574305
End: 2576401
Strand: Direct
Name: prc [H]
Synonym: azo2338
Alternate gene names: 119898629
Gene position: 2574305-2576401 (Clockwise)
Preceding gene: 119898628
Following gene: 119898638
Centisome position: 58.83
GC content: 70.43
Gene sequence:
>2097_bases ATGAACCGAAAACTGCCCTGGATCGTGCTGCTACTCAGCGCCACGCTGCACGCGGCCGAACCCCAGGTGGCAACGCCGCT GCAGCCCGCGGCCACCCAGGCCGAGGCCGCGGCGCTGAGCGCGCGGCTGCTCGGCCGCTTCCACTACCAGCCCACGCCGC TGGACGACGCGCTGTCCGCCCGCATCCTCGACCGCTACCTGAAGGCGCTCGACCCCGAGCGGGTGTACTTCGTGCAGGCG GATATCGAGCGCTACGCCGCGGCCCGCACCACGCTGGACGACGCGATCCGCGAGCAGGACCTGCGGCTGCCGTTCGAGAT CTTCGCGCTTTACCAGACCCGGCTGCGCGAGCGACTGGCGCTGGCGCGCGAACTCGCCGCGGGCAGCTTCGACTTCTCCA CCGACGAGCAGTACCGCTTCGTGCGCACCGACGAGCCCTGGCCCGCGAACGAGGCGGCGGCCCGAGAACTGTGGCGCAAG CGGGTCAAGAACGACTGGCTGCGCCTCAAGCTCGCCGGCAAGGACGACAAGGGCATCCGCGACACGCTCACCAAGCGCTA CGACAGCCTGCTGACGCGCGCCACGCGGATCAAGAGCGAGGACGTGTTCCAGACCTTCATGAACGCCTACGCGACCTCGA TCGAGCCGCACACCAACTACCTCGGCCCGCGCGCCTCGGAAGACTTCGAGATTTCGATGCGGTTGTCGCTGGTCGGCATC GGCGCGGTGCTGCAGGAGCGCGACGATTACATCGTGATCCGCGAACTGGTGCCCGGCGGCCCGGCCGCGCGCTCCACCCA GCTCGCGATCGGCGACCGCATCCTCGGCGTCGGCCAGGGCGAGCAGCCGCCGGTGGAAGTGCTGGGCTGGCGGGTGGACG ACGTGGTGGCGCTGATCCGCGGCAACAAGGACACCGTGGTGGTGCTCGACGTGCTGCCCGCCGAGGCCGGCCCCGACGGC GCGCACAAGAAGGTGAAGCTGGTGCGCGACACCATCAACCTGGAAAAGCAGGCCGCGTCCAAGAGCGTGATCGACGCCGG CCCCCCGGAGGCGCCCCGCAAGGTGGGCGTGATCACCCTGCCCGCGTTCTACCAGGACGTGGCGGCGCGCGGGGCCGGCG GCGACTACCGCAGCGCCAGCCGCGACGTCGCCCGCCTGCTGCGCGAACTGAAGGCCGAAGGCGCCGACGCGGTGCTGATC GACCTGCGCAACAACGGCGGCGGCTCGCTGGACGAGGCGGTACGGCTCACCGGCCTCTTCATCGACACCGGCCCGGTGGT GCAGCAGCGCAGCGCCCAGGGGCAGATCCGCGTGGAGCGCGACGCCGACGCCGGCCAGGTGTGGGACGGCCCGCTCGGCG TGTTGATCAACCGCGCCTCCGCCTCCGCTTCCGAGATTTTCGCGGGGGCGATCCAGGACTACGGCCGCGGCGTGCTGATC GGCGAACAGAGCTTCGGCAAGGGCACGGTGCAGACGCTGGTCGATCTCGACGAGATGGCCCGCAACAGCAAGCCCACCTA TGGCGAACTGAAGATGACGATCGCGCAGTTCTACCGCGTGAACGGCGAGAGCACCCAGCTGCGCGGCGTGAGCCCCGACA TCGGCCTGCCCTCGCTGCTCGACGCCGACCGCTTCGGCGAATCCGGCTTCGACAACGCGCTGCCCTGGACCCGCATCGAC CCCGCGCCCCACAAGGCCGCCGGCGGCATCCCGGCGCTGGTGCCGACGCTGCAGCAGCGTCACCTTGCACGCATCGCCAA CGACGCCGCCTTCCGCAACCTGCAGCAGGACGTCACCGAAGTCGCCGCCCAGCGCAAGAAGCTCGACATCTCGCTGAATG AAGCCGAGCGCCGCCGCGAACGCGCCGAGCAGGAACGCAAGCTGCGCGCCAACGCCAACGCCGCCGACGAAGACAACGGC GACGACGGCCTGCTCGCCGGCGAACGCAGCCTCGACGCCGAACTGGCCGCCGAACAGCTGCGCAAGAAGGCACCCGACGT CCTGCTGAACGAAGCCGCCCGCATCGTCGGCGACCTCGCCACCCTGCAGCGCAGCGAAGCGAACGTGGCAGCGGGAGGAC GGCGTAGCCTGAACTGA
Upstream 100 bases:
>100_bases TGGCGGAAGTGCCGGCCAGTCCGGCCCCCGCCGCCGCCCCCGGCTGGTAGGCCGCACGCAACAACCGGCCCCTTCCGCAG GTCATGCCTGGAGTCCCTGA
Downstream 100 bases:
>100_bases GGCGGCACGTCCCCAGCCACTGAAATGAAGAGGCCCCGGCGAATCGCCGGGGCCTTTTTGCTTGAGGAGGTGAAGGCAGC CGAGACGGCCGGGGGTTTCC
Product: tail-specific penicillin-binding protein protease
Products: NA
Alternate protein names: C-terminal-processing peptidase; PRC protein; Protease Re [H]
Number of amino acids: Translated: 698; Mature: 698
Protein sequence:
>698_residues MNRKLPWIVLLLSATLHAAEPQVATPLQPAATQAEAAALSARLLGRFHYQPTPLDDALSARILDRYLKALDPERVYFVQA DIERYAAARTTLDDAIREQDLRLPFEIFALYQTRLRERLALARELAAGSFDFSTDEQYRFVRTDEPWPANEAAARELWRK RVKNDWLRLKLAGKDDKGIRDTLTKRYDSLLTRATRIKSEDVFQTFMNAYATSIEPHTNYLGPRASEDFEISMRLSLVGI GAVLQERDDYIVIRELVPGGPAARSTQLAIGDRILGVGQGEQPPVEVLGWRVDDVVALIRGNKDTVVVLDVLPAEAGPDG AHKKVKLVRDTINLEKQAASKSVIDAGPPEAPRKVGVITLPAFYQDVAARGAGGDYRSASRDVARLLRELKAEGADAVLI DLRNNGGGSLDEAVRLTGLFIDTGPVVQQRSAQGQIRVERDADAGQVWDGPLGVLINRASASASEIFAGAIQDYGRGVLI GEQSFGKGTVQTLVDLDEMARNSKPTYGELKMTIAQFYRVNGESTQLRGVSPDIGLPSLLDADRFGESGFDNALPWTRID PAPHKAAGGIPALVPTLQQRHLARIANDAAFRNLQQDVTEVAAQRKKLDISLNEAERRRERAEQERKLRANANAADEDNG DDGLLAGERSLDAELAAEQLRKKAPDVLLNEAARIVGDLATLQRSEANVAAGGRRSLN
Sequences:
>Translated_698_residues MNRKLPWIVLLLSATLHAAEPQVATPLQPAATQAEAAALSARLLGRFHYQPTPLDDALSARILDRYLKALDPERVYFVQA DIERYAAARTTLDDAIREQDLRLPFEIFALYQTRLRERLALARELAAGSFDFSTDEQYRFVRTDEPWPANEAAARELWRK RVKNDWLRLKLAGKDDKGIRDTLTKRYDSLLTRATRIKSEDVFQTFMNAYATSIEPHTNYLGPRASEDFEISMRLSLVGI GAVLQERDDYIVIRELVPGGPAARSTQLAIGDRILGVGQGEQPPVEVLGWRVDDVVALIRGNKDTVVVLDVLPAEAGPDG AHKKVKLVRDTINLEKQAASKSVIDAGPPEAPRKVGVITLPAFYQDVAARGAGGDYRSASRDVARLLRELKAEGADAVLI DLRNNGGGSLDEAVRLTGLFIDTGPVVQQRSAQGQIRVERDADAGQVWDGPLGVLINRASASASEIFAGAIQDYGRGVLI GEQSFGKGTVQTLVDLDEMARNSKPTYGELKMTIAQFYRVNGESTQLRGVSPDIGLPSLLDADRFGESGFDNALPWTRID PAPHKAAGGIPALVPTLQQRHLARIANDAAFRNLQQDVTEVAAQRKKLDISLNEAERRRERAEQERKLRANANAADEDNG DDGLLAGERSLDAELAAEQLRKKAPDVLLNEAARIVGDLATLQRSEANVAAGGRRSLN >Mature_698_residues MNRKLPWIVLLLSATLHAAEPQVATPLQPAATQAEAAALSARLLGRFHYQPTPLDDALSARILDRYLKALDPERVYFVQA DIERYAAARTTLDDAIREQDLRLPFEIFALYQTRLRERLALARELAAGSFDFSTDEQYRFVRTDEPWPANEAAARELWRK RVKNDWLRLKLAGKDDKGIRDTLTKRYDSLLTRATRIKSEDVFQTFMNAYATSIEPHTNYLGPRASEDFEISMRLSLVGI GAVLQERDDYIVIRELVPGGPAARSTQLAIGDRILGVGQGEQPPVEVLGWRVDDVVALIRGNKDTVVVLDVLPAEAGPDG AHKKVKLVRDTINLEKQAASKSVIDAGPPEAPRKVGVITLPAFYQDVAARGAGGDYRSASRDVARLLRELKAEGADAVLI DLRNNGGGSLDEAVRLTGLFIDTGPVVQQRSAQGQIRVERDADAGQVWDGPLGVLINRASASASEIFAGAIQDYGRGVLI GEQSFGKGTVQTLVDLDEMARNSKPTYGELKMTIAQFYRVNGESTQLRGVSPDIGLPSLLDADRFGESGFDNALPWTRID PAPHKAAGGIPALVPTLQQRHLARIANDAAFRNLQQDVTEVAAQRKKLDISLNEAERRRERAEQERKLRANANAADEDNG DDGLLAGERSLDAELAAEQLRKKAPDVLLNEAARIVGDLATLQRSEANVAAGGRRSLN
Specific function: Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses [H]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=661, Percent_Identity=43.1164901664145, Blast_Score=491, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR020992 [H]
Pfam domain/function: PF11818 DUF3340; PF00595 PDZ; PF03572 Peptidase_S41 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 76496; Mature: 76496
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKLPWIVLLLSATLHAAEPQVATPLQPAATQAEAAALSARLLGRFHYQPTPLDDALSA CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RILDRYLKALDPERVYFVQADIERYAAARTTLDDAIREQDLRLPFEIFALYQTRLRERLA HHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LARELAAGSFDFSTDEQYRFVRTDEPWPANEAAARELWRKRVKNDWLRLKLAGKDDKGIR HHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHH DTLTKRYDSLLTRATRIKSEDVFQTFMNAYATSIEPHTNYLGPRASEDFEISMRLSLVGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEH GAVLQERDDYIVIRELVPGGPAARSTQLAIGDRILGVGQGEQPPVEVLGWRVDDVVALIR HHHHHCCCCEEEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCHHHHCCCHHHHHHHHC GNKDTVVVLDVLPAEAGPDGAHKKVKLVRDTINLEKQAASKSVIDAGPPEAPRKVGVITL CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC PAFYQDVAARGAGGDYRSASRDVARLLRELKAEGADAVLIDLRNNGGGSLDEAVRLTGLF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHEEEEEE IDTGPVVQQRSAQGQIRVERDADAGQVWDGPLGVLINRASASASEIFAGAIQDYGRGVLI EECCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCEEEE GEQSFGKGTVQTLVDLDEMARNSKPTYGELKMTIAQFYRVNGESTQLRGVSPDIGLPSLL ECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHH DADRFGESGFDNALPWTRIDPAPHKAAGGIPALVPTLQQRHLARIANDAAFRNLQQDVTE CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAQRKKLDISLNEAERRRERAEQERKLRANANAADEDNGDDGLLAGERSLDAELAAEQL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHH RKKAPDVLLNEAARIVGDLATLQRSEANVAAGGRRSLN HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNRKLPWIVLLLSATLHAAEPQVATPLQPAATQAEAAALSARLLGRFHYQPTPLDDALSA CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RILDRYLKALDPERVYFVQADIERYAAARTTLDDAIREQDLRLPFEIFALYQTRLRERLA HHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LARELAAGSFDFSTDEQYRFVRTDEPWPANEAAARELWRKRVKNDWLRLKLAGKDDKGIR HHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHH DTLTKRYDSLLTRATRIKSEDVFQTFMNAYATSIEPHTNYLGPRASEDFEISMRLSLVGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEH GAVLQERDDYIVIRELVPGGPAARSTQLAIGDRILGVGQGEQPPVEVLGWRVDDVVALIR HHHHHCCCCEEEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCHHHHCCCHHHHHHHHC GNKDTVVVLDVLPAEAGPDGAHKKVKLVRDTINLEKQAASKSVIDAGPPEAPRKVGVITL CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC PAFYQDVAARGAGGDYRSASRDVARLLRELKAEGADAVLIDLRNNGGGSLDEAVRLTGLF HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHEEEEEE IDTGPVVQQRSAQGQIRVERDADAGQVWDGPLGVLINRASASASEIFAGAIQDYGRGVLI EECCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCEEEE GEQSFGKGTVQTLVDLDEMARNSKPTYGELKMTIAQFYRVNGESTQLRGVSPDIGLPSLL ECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHH DADRFGESGFDNALPWTRIDPAPHKAAGGIPALVPTLQQRHLARIANDAAFRNLQQDVTE CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAQRKKLDISLNEAERRRERAEQERKLRANANAADEDNGDDGLLAGERSLDAELAAEQL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHH RKKAPDVLLNEAARIVGDLATLQRSEANVAAGGRRSLN HHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856173; 1729701; 9097040; 9278503; 1447154; 10049386; 7499412; 8576225 [H]