| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is fyuA [H]
Identifier: 119898638
GI number: 119898638
Start: 2586159
End: 2588936
Strand: Direct
Name: fyuA [H]
Synonym: azo2347
Alternate gene names: 119898638
Gene position: 2586159-2588936 (Clockwise)
Preceding gene: 119898629
Following gene: 119898640
Centisome position: 59.1
GC content: 65.55
Gene sequence:
>2778_bases ATGACAACCCGCGTGCGCAAACACCCTCCGGCGCCACGACCTTCCAACCCCACGCCATTCCGCCTTTCGCCGCTTGCCGC GCTGATCGCCGGCATGGCCATCGCGGGCAGCGCACCGCTCCATGCGGCGGATACCCGCTCGGTCGCCGAACTGCAGGCCG AAATCGCGCGCCTGCAACAGGAACTTGCAGCAAAGACCGCTGCGGAAGGCGGCACTGCCGCCGCACCCGCCGCTGCGCCT GCTGCAAGCAGCCCCGCGGCGGACGGCTCGCCCCAGGCGCTGGACACCGTGGTGGTCCGCAGCCGCCACCGGCTGGAACG CCTGCAGGACGTGCCGGTCTCGGTGGCGGTGGTCACCGGCGCGGAACTCGAGCGTGAAGGCGCATCCGATCTGGACGCCA TCGCGAAACGTGTCGGCAACTTCTCGTGGAACCCCGGCAACGCGCGCACCAGCAGCCTGTCGATCCGCGGCCTGGGCAAG CAGTCGCAAACGGACGCGATGGACCCGAGCGTGGGCATCAACGTCGACAACGTCGCCTACTCCTACAACCCGCTGTCCAG CTTCGACCTGTTCGACGTCGACTCGGTGGAGGTGCTGCGCGGCCCGCAGGGCACGCTGTTCGGCAAGAACGCCAACCTCG GCGTGCTCAAGATCACCAACAAGCGGCCGAGCTTCAACCCCGAGGCGGATTACTCGCTGACCTTCGGTGAAGAACAGCGC TTCATCGCCCGCGGCGCGGTGGGCGGCGGCGTGGTGGATGGCCTGCTCGCATGGCGCGGCGCCTTCCAGTTCGACCGCGG CCAGGGCTATGTGAAAAACGTGGAGAAGGGCTATCTCGAAAGCACCTTCGGCAACCACGACCGCGCCGCCGGACGGGTGC AGTTCCTGCTGACGCCGGGCCCGGACTTCGATGCCCGCCTCAGCATCGAAATGGCGCCCACCACCGGCGAGGCCTTCAAC GGCAAGACGGTCTACACGCCAACGCCCACGCGTTACGCCGACGGCAGCGTCAACACGCTCAGTTCCGACGCCTCCACCCG GTTGGCGCGGCGCTGGTTCCGTCAGCTCTCCAGCTACGACTACCAGCGCGACTACCTGTACGGCGGCAACACGGTGAACC TGGATCACCAGACGCCCACCTACACCGACACCAAGGGCATCTCCGCCGAGCTGAACTGGCGCGTCGCCGGCCACACCCTG ACCTCGATCACCGCCTACAAGGACTTCCGCTTCCAGGTGCGCAACGACGAGGGCACGCCCTTCGACATCACCAAGCGCGG CGGCGGCCACGTGGACAAGTTCGAGCAGATCAGCCAGGAATTCCGCCTGACCTCCGAACTGGGCGGCTTCGTCGATTACC AGACCGGCGTGCTGCTGCTGAAGTCGAGCAACCGCTACGATTCCAACGCCGGCTTCGGCAGCGACGCCGGCGCATGGTTT GCCAGCAACTCGCAATACAACACGCTCGACGCCAACAGCAACGGCCGTTACCTGCTGGAGAACTCGCTGAACGAACTGCA GGTGTCGCCGCTGCAGAAGATCGAGACCCAGAGCGCGGCGATCTTCGGCCAGGCCAACTGGCACCTGACCGAACCGCTGA CGCTCACCACCGGCCTGCGCTTCACCCACGAGGACCGCGACAACCGCACCAGCCGCCTGATCATCAACGAAGGCTACGGT GCGGAGCTGAACCCGGTGGCGGTCAATGGCGTGCAGCTAGGCGGCTTCTCGTCCAACAACACCACGGGCGAACTGTCCGG CACCAACTCCACGGCGCAGCTCAACGTGGCCGACTTTGTCGCCAACAAGTACTTCGGCACCGCGATCACGGCTACGCCGG GCCAGGCGTACGCCAGCCTGACCGCCGCGCAGAAGCGCCAGGTGGCTGCGGCCAAGGCGATCCGCCGCACCAACATCGGC GTGCTGTGGGCCGAGACCAAGGCCAAGGGCTTCCGTGAGACGCAACCGACGCTGCTGCTGTCGCCGAGCTACAAGGTGAA TGAGAACCTCACCACCTATTTCTCGGCCCAGTACGGCGAAAAGGCCGGCATCGCGCAGATCACCAACGGCTATTCCAACC CGGTCAAGCCCGAAAAGACGACCTCGTTCGAACTCGGCTTCAAGTCGACGCTGCTGGATCGCACGCTGGTGCTGAACGCC AACATCTTCCGCACCAACATCCGCGACTACCAGCAGGCCGTGCAGGTGTATGACGAATACACCACCAACCTGAACAACGA CGGCACCACCTACTACACCAGCGCCACCGGCAACGTGCCCAAGGTGCGGGTGAACGGGGTGGAGATCGATGCGACCTACT CCGGCATCCGCTACACCACGCTGCGCTTCTCGGGCGCCTACAACGACGCGGTGTACAAGTCCTTCCCGAATGCGGGCAAG GCGGCGGAGGTCAACAACATCGCGGCGCCGTACGTGGATCTGAGCGGCAAGAACCTGCCGGGCGCGGCCAAGTACACCTT CAGCGTCGGCGCGGAATACCGCCGCCCGGTGCTGGGCGACAAGGAGTTCCACACCAGCTTCAACACCTACTACACCAGCA AGTTCAACTCCGACAACACGCTGTCGAGCTACGGCTGGATCGACGCCCACAGCACCACCGACTTCTCGATCGGCCTCGGC CGGCGCGACAAGAGCTACGACGTGACGCTGCTGGTGAAGAACCTGTTCGACGACGACACCCCGCTGGCGAAGACCTGGAA CACCTACGTTCCGGCGCCGCCGCGCTGGGTCGGCATCGTCTTCAGCGGCAAGCTGTAA
Upstream 100 bases:
>100_bases AATACGGAATTGCAACGCGCAAATCCCTATAACCAGTGGCATAGCGATTGCTGAATTGGCGCCCTGTGTTTTCGGTTTTC AACCAGGGAGAAAAAACGTC
Downstream 100 bases:
>100_bases GCGCCGCGTGCAGCCCGCCCCGGCGGGCTGCGCTTCCCGCCCTCAGCGGCGGGTCGCTTCGGCGCTCGCCGCTTCCCTGT TGGCGCGCGGCGCGATCTTC
Product: putative TonB-dependent receptor
Products: NA
Alternate protein names: IPR65; IRPC [H]
Number of amino acids: Translated: 925; Mature: 924
Protein sequence:
>925_residues MTTRVRKHPPAPRPSNPTPFRLSPLAALIAGMAIAGSAPLHAADTRSVAELQAEIARLQQELAAKTAAEGGTAAAPAAAP AASSPAADGSPQALDTVVVRSRHRLERLQDVPVSVAVVTGAELEREGASDLDAIAKRVGNFSWNPGNARTSSLSIRGLGK QSQTDAMDPSVGINVDNVAYSYNPLSSFDLFDVDSVEVLRGPQGTLFGKNANLGVLKITNKRPSFNPEADYSLTFGEEQR FIARGAVGGGVVDGLLAWRGAFQFDRGQGYVKNVEKGYLESTFGNHDRAAGRVQFLLTPGPDFDARLSIEMAPTTGEAFN GKTVYTPTPTRYADGSVNTLSSDASTRLARRWFRQLSSYDYQRDYLYGGNTVNLDHQTPTYTDTKGISAELNWRVAGHTL TSITAYKDFRFQVRNDEGTPFDITKRGGGHVDKFEQISQEFRLTSELGGFVDYQTGVLLLKSSNRYDSNAGFGSDAGAWF ASNSQYNTLDANSNGRYLLENSLNELQVSPLQKIETQSAAIFGQANWHLTEPLTLTTGLRFTHEDRDNRTSRLIINEGYG AELNPVAVNGVQLGGFSSNNTTGELSGTNSTAQLNVADFVANKYFGTAITATPGQAYASLTAAQKRQVAAAKAIRRTNIG VLWAETKAKGFRETQPTLLLSPSYKVNENLTTYFSAQYGEKAGIAQITNGYSNPVKPEKTTSFELGFKSTLLDRTLVLNA NIFRTNIRDYQQAVQVYDEYTTNLNNDGTTYYTSATGNVPKVRVNGVEIDATYSGIRYTTLRFSGAYNDAVYKSFPNAGK AAEVNNIAAPYVDLSGKNLPGAAKYTFSVGAEYRRPVLGDKEFHTSFNTYYTSKFNSDNTLSSYGWIDAHSTTDFSIGLG RRDKSYDVTLLVKNLFDDDTPLAKTWNTYVPAPPRWVGIVFSGKL
Sequences:
>Translated_925_residues MTTRVRKHPPAPRPSNPTPFRLSPLAALIAGMAIAGSAPLHAADTRSVAELQAEIARLQQELAAKTAAEGGTAAAPAAAP AASSPAADGSPQALDTVVVRSRHRLERLQDVPVSVAVVTGAELEREGASDLDAIAKRVGNFSWNPGNARTSSLSIRGLGK QSQTDAMDPSVGINVDNVAYSYNPLSSFDLFDVDSVEVLRGPQGTLFGKNANLGVLKITNKRPSFNPEADYSLTFGEEQR FIARGAVGGGVVDGLLAWRGAFQFDRGQGYVKNVEKGYLESTFGNHDRAAGRVQFLLTPGPDFDARLSIEMAPTTGEAFN GKTVYTPTPTRYADGSVNTLSSDASTRLARRWFRQLSSYDYQRDYLYGGNTVNLDHQTPTYTDTKGISAELNWRVAGHTL TSITAYKDFRFQVRNDEGTPFDITKRGGGHVDKFEQISQEFRLTSELGGFVDYQTGVLLLKSSNRYDSNAGFGSDAGAWF ASNSQYNTLDANSNGRYLLENSLNELQVSPLQKIETQSAAIFGQANWHLTEPLTLTTGLRFTHEDRDNRTSRLIINEGYG AELNPVAVNGVQLGGFSSNNTTGELSGTNSTAQLNVADFVANKYFGTAITATPGQAYASLTAAQKRQVAAAKAIRRTNIG VLWAETKAKGFRETQPTLLLSPSYKVNENLTTYFSAQYGEKAGIAQITNGYSNPVKPEKTTSFELGFKSTLLDRTLVLNA NIFRTNIRDYQQAVQVYDEYTTNLNNDGTTYYTSATGNVPKVRVNGVEIDATYSGIRYTTLRFSGAYNDAVYKSFPNAGK AAEVNNIAAPYVDLSGKNLPGAAKYTFSVGAEYRRPVLGDKEFHTSFNTYYTSKFNSDNTLSSYGWIDAHSTTDFSIGLG RRDKSYDVTLLVKNLFDDDTPLAKTWNTYVPAPPRWVGIVFSGKL >Mature_924_residues TTRVRKHPPAPRPSNPTPFRLSPLAALIAGMAIAGSAPLHAADTRSVAELQAEIARLQQELAAKTAAEGGTAAAPAAAPA ASSPAADGSPQALDTVVVRSRHRLERLQDVPVSVAVVTGAELEREGASDLDAIAKRVGNFSWNPGNARTSSLSIRGLGKQ SQTDAMDPSVGINVDNVAYSYNPLSSFDLFDVDSVEVLRGPQGTLFGKNANLGVLKITNKRPSFNPEADYSLTFGEEQRF IARGAVGGGVVDGLLAWRGAFQFDRGQGYVKNVEKGYLESTFGNHDRAAGRVQFLLTPGPDFDARLSIEMAPTTGEAFNG KTVYTPTPTRYADGSVNTLSSDASTRLARRWFRQLSSYDYQRDYLYGGNTVNLDHQTPTYTDTKGISAELNWRVAGHTLT SITAYKDFRFQVRNDEGTPFDITKRGGGHVDKFEQISQEFRLTSELGGFVDYQTGVLLLKSSNRYDSNAGFGSDAGAWFA SNSQYNTLDANSNGRYLLENSLNELQVSPLQKIETQSAAIFGQANWHLTEPLTLTTGLRFTHEDRDNRTSRLIINEGYGA ELNPVAVNGVQLGGFSSNNTTGELSGTNSTAQLNVADFVANKYFGTAITATPGQAYASLTAAQKRQVAAAKAIRRTNIGV LWAETKAKGFRETQPTLLLSPSYKVNENLTTYFSAQYGEKAGIAQITNGYSNPVKPEKTTSFELGFKSTLLDRTLVLNAN IFRTNIRDYQQAVQVYDEYTTNLNNDGTTYYTSATGNVPKVRVNGVEIDATYSGIRYTTLRFSGAYNDAVYKSFPNAGKA AEVNNIAAPYVDLSGKNLPGAAKYTFSVGAEYRRPVLGDKEFHTSFNTYYTSKFNSDNTLSSYGWIDAHSTTDFSIGLGR RDKSYDVTLLVKNLFDDDTPLAKTWNTYVPAPPRWVGIVFSGKL
Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 100592; Mature: 100461
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRVRKHPPAPRPSNPTPFRLSPLAALIAGMAIAGSAPLHAADTRSVAELQAEIARLQQ CCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ELAAKTAAEGGTAAAPAAAPAASSPAADGSPQALDTVVVRSRHRLERLQDVPVSVAVVTG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC AELEREGASDLDAIAKRVGNFSWNPGNARTSSLSIRGLGKQSQTDAMDPSVGINVDNVAY CHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCEEE SYNPLSSFDLFDVDSVEVLRGPQGTLFGKNANLGVLKITNKRPSFNPEADYSLTFGEEQR ECCCCCCCCEECCCCHHHHCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCC FIARGAVGGGVVDGLLAWRGAFQFDRGQGYVKNVEKGYLESTFGNHDRAAGRVQFLLTPG EEECCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC PDFDARLSIEMAPTTGEAFNGKTVYTPTPTRYADGSVNTLSSDASTRLARRWFRQLSSYD CCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC YQRDYLYGGNTVNLDHQTPTYTDTKGISAELNWRVAGHTLTSITAYKDFRFQVRNDEGTP CCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEEEEEEECCCCCC FDITKRGGGHVDKFEQISQEFRLTSELGGFVDYQTGVLLLKSSNRYDSNAGFGSDAGAWF EEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCCCCCCCEE ASNSQYNTLDANSNGRYLLENSLNELQVSPLQKIETQSAAIFGQANWHLTEPLTLTTGLR ECCCCCEEEECCCCCCEEEECCCCCEECCHHHHHCCCCEEEEECCCEEECCCEEEECCCE FTHEDRDNRTSRLIINEGYGAELNPVAVNGVQLGGFSSNNTTGELSGTNSTAQLNVADFV EEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEHHHHH ANKYFGTAITATPGQAYASLTAAQKRQVAAAKAIRRTNIGVLWAETKAKGFRETQPTLLL HHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE SPSYKVNENLTTYFSAQYGEKAGIAQITNGYSNPVKPEKTTSFELGFKSTLLDRTLVLNA CCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCHHHHHCEEEEEEC NIFRTNIRDYQQAVQVYDEYTTNLNNDGTTYYTSATGNVPKVRVNGVEIDATYSGIRYTT CEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCEEEEEEECCEEEEE LRFSGAYNDAVYKSFPNAGKAAEVNNIAAPYVDLSGKNLPGAAKYTFSVGAEYRRPVLGD EEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHCCCCCCC KEFHTSFNTYYTSKFNSDNTLSSYGWIDAHSTTDFSIGLGRRDKSYDVTLLVKNLFDDDT HHHCCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEEEEEHHCCCCC PLAKTWNTYVPAPPRWVGIVFSGKL CCHHCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TTRVRKHPPAPRPSNPTPFRLSPLAALIAGMAIAGSAPLHAADTRSVAELQAEIARLQQ CCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ELAAKTAAEGGTAAAPAAAPAASSPAADGSPQALDTVVVRSRHRLERLQDVPVSVAVVTG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEC AELEREGASDLDAIAKRVGNFSWNPGNARTSSLSIRGLGKQSQTDAMDPSVGINVDNVAY CHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCEEE SYNPLSSFDLFDVDSVEVLRGPQGTLFGKNANLGVLKITNKRPSFNPEADYSLTFGEEQR ECCCCCCCCEECCCCHHHHCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCC FIARGAVGGGVVDGLLAWRGAFQFDRGQGYVKNVEKGYLESTFGNHDRAAGRVQFLLTPG EEECCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC PDFDARLSIEMAPTTGEAFNGKTVYTPTPTRYADGSVNTLSSDASTRLARRWFRQLSSYD CCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC YQRDYLYGGNTVNLDHQTPTYTDTKGISAELNWRVAGHTLTSITAYKDFRFQVRNDEGTP CCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEEEEEEECCCCCC FDITKRGGGHVDKFEQISQEFRLTSELGGFVDYQTGVLLLKSSNRYDSNAGFGSDAGAWF EEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCCCCCCCEE ASNSQYNTLDANSNGRYLLENSLNELQVSPLQKIETQSAAIFGQANWHLTEPLTLTTGLR ECCCCCEEEECCCCCCEEEECCCCCEECCHHHHHCCCCEEEEECCCEEECCCEEEECCCE FTHEDRDNRTSRLIINEGYGAELNPVAVNGVQLGGFSSNNTTGELSGTNSTAQLNVADFV EEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEEHHHHH ANKYFGTAITATPGQAYASLTAAQKRQVAAAKAIRRTNIGVLWAETKAKGFRETQPTLLL HHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE SPSYKVNENLTTYFSAQYGEKAGIAQITNGYSNPVKPEKTTSFELGFKSTLLDRTLVLNA CCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCHHHHHCEEEEEEC NIFRTNIRDYQQAVQVYDEYTTNLNNDGTTYYTSATGNVPKVRVNGVEIDATYSGIRYTT CEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCEEEEEEECCEEEEE LRFSGAYNDAVYKSFPNAGKAAEVNNIAAPYVDLSGKNLPGAAKYTFSVGAEYRRPVLGD EEECCCCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCHHCCCCCCC KEFHTSFNTYYTSKFNSDNTLSSYGWIDAHSTTDFSIGLGRRDKSYDVTLLVKNLFDDDT HHHCCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEEEEEHHCCCCC PLAKTWNTYVPAPPRWVGIVFSGKL CCHHCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA