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The map label for this gene is lpsE [H]

Identifier: 119898614

GI number: 119898614

Start: 2555172

End: 2556242

Strand: Direct

Name: lpsE [H]

Synonym: azo2323

Alternate gene names: 119898614

Gene position: 2555172-2556242 (Clockwise)

Preceding gene: 119898613

Following gene: 119898615

Centisome position: 58.39

GC content: 73.2

Gene sequence:

>1071_bases
ATGAAATCGCTACACATCATCGGCAGCAAGGAGATGGGCGGGGCCGAACGCTGGTTCGTCCGCTTCCTGGCCGCCATGCA
GCGCCACGGCGCCGCGGTGGAGGCCGTGGTGCGGCGCGGCTCGGCGCTGGTGGGCCAGATGCCGGCCGGGCTGGTGCCCG
ACACGCTGCCGCTGCGCACCGTGTGGGATCCGCTGTCGCGCCACGAACTCGCACGCCGCATCGCGCGCAGCGACGCCCCC
ATCGTGCAGACCTACATGGGGCGCGCCACCCGCCTGACGCGGCTGGAGCCGGGCCGCGGCAAGGTGCACGTATCGCGCCT
GGGCGGCTACTACCGGTTGCCGCCCTTCGCCCACGCCCACGCCTGGGTGGGCAACACCCGCGGCCTGTGCGACTGGATGA
TCCGCGGCGGCCTGCCCGCGGCGCGCGTCCATCACATCACCAACTTCGCCGAACCCGCGCGCACGGTGCCCGCCACCGAA
CTGGCCGCGCTGCGCGCGCGCATCGGCGTGGATGTGGACGACTGCGTGCTGCTGACCGCCGGGCGCCTGGTCGAGGTGAA
GGGCCAGCGCTACCTGATCAACGCGTTCGCGCGCCTGCCGCGCGAGATCGACGGCCGCCGGCTGCGGCTGGTGGTGCTGG
GCGACGGCCCGCTGGGTGCCCCACTGCGCCACCAGGCCGAAACCGCTGGCGTGGCCGACCGCGTGATCTGGGCCGGCTGG
CAGCATGACCCGGCACCCTGGTTCCAGCTGGCCGACATGGTGGTGTTTCCGTCGCGCGATGCCGAAACCCTGGGCAACGT
CATCCTCGAAGCCTGGACACACGGCAAGCCGCTGGTCGCCACCGCGTTTCGCGGCGCGCGGGAAATCGCCCGCCATGGCG
ACGACGCCTGGGTGGTGCCGTGCGACGATGCCGCGGCGCTCGCCGCCGGCATCGAGCACACCCTGCGCGACGCCGGACTC
CAGCACGCGCTGGTGACCCGCGGCCGCGCGCGGGTAGCGGGCGAATTCTCCGAAACCGGCGTGGTCTCGCAGTACCGCGC
CCTTTACGCCCAGCTCGCCGACCGCCGCTGA

Upstream 100 bases:

>100_bases
GGCAATCTGGCGATCTACCGCGACGTGCTGAGCGCCGCGCTGCCCGACGCGCTGGCCGACCCGCTGATGTAGGCGGCAAC
ACGAGGACGCGCGGCACAGG

Downstream 100 bases:

>100_bases
CATGCCCGTGCCCGCCCTGCAGCCCGACCGCATCAACATCCTGATGTACCACCAGGTGGGCGACTTCGGCCGCAGCCCCG
CGGTGCGCGCCCATCCGTCC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKSLHIIGSKEMGGAERWFVRFLAAMQRHGAAVEAVVRRGSALVGQMPAGLVPDTLPLRTVWDPLSRHELARRIARSDAP
IVQTYMGRATRLTRLEPGRGKVHVSRLGGYYRLPPFAHAHAWVGNTRGLCDWMIRGGLPAARVHHITNFAEPARTVPATE
LAALRARIGVDVDDCVLLTAGRLVEVKGQRYLINAFARLPREIDGRRLRLVVLGDGPLGAPLRHQAETAGVADRVIWAGW
QHDPAPWFQLADMVVFPSRDAETLGNVILEAWTHGKPLVATAFRGAREIARHGDDAWVVPCDDAAALAAGIEHTLRDAGL
QHALVTRGRARVAGEFSETGVVSQYRALYAQLADRR

Sequences:

>Translated_356_residues
MKSLHIIGSKEMGGAERWFVRFLAAMQRHGAAVEAVVRRGSALVGQMPAGLVPDTLPLRTVWDPLSRHELARRIARSDAP
IVQTYMGRATRLTRLEPGRGKVHVSRLGGYYRLPPFAHAHAWVGNTRGLCDWMIRGGLPAARVHHITNFAEPARTVPATE
LAALRARIGVDVDDCVLLTAGRLVEVKGQRYLINAFARLPREIDGRRLRLVVLGDGPLGAPLRHQAETAGVADRVIWAGW
QHDPAPWFQLADMVVFPSRDAETLGNVILEAWTHGKPLVATAFRGAREIARHGDDAWVVPCDDAAALAAGIEHTLRDAGL
QHALVTRGRARVAGEFSETGVVSQYRALYAQLADRR
>Mature_356_residues
MKSLHIIGSKEMGGAERWFVRFLAAMQRHGAAVEAVVRRGSALVGQMPAGLVPDTLPLRTVWDPLSRHELARRIARSDAP
IVQTYMGRATRLTRLEPGRGKVHVSRLGGYYRLPPFAHAHAWVGNTRGLCDWMIRGGLPAARVHHITNFAEPARTVPATE
LAALRARIGVDVDDCVLLTAGRLVEVKGQRYLINAFARLPREIDGRRLRLVVLGDGPLGAPLRHQAETAGVADRVIWAGW
QHDPAPWFQLADMVVFPSRDAETLGNVILEAWTHGKPLVATAFRGAREIARHGDDAWVVPCDDAAALAAGIEHTLRDAGL
QHALVTRGRARVAGEFSETGVVSQYRALYAQLADRR

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39037; Mature: 39037

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLHIIGSKEMGGAERWFVRFLAAMQRHGAAVEAVVRRGSALVGQMPAGLVPDTLPLRT
CCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCCCCCCCCHHH
VWDPLSRHELARRIARSDAPIVQTYMGRATRLTRLEPGRGKVHVSRLGGYYRLPPFAHAH
HHCHHHHHHHHHHHHHCCCCHHHHHHCCHHEEEEECCCCCEEEEEECCCEEECCCCHHHH
AWVGNTRGLCDWMIRGGLPAARVHHITNFAEPARTVPATELAALRARIGVDVDDCVLLTA
HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHEEEC
GRLVEVKGQRYLINAFARLPREIDGRRLRLVVLGDGPLGAPLRHQAETAGVADRVIWAGW
CCEEEECCCHHHHHHHHHCCHHCCCCEEEEEEECCCCCCCCCHHHHHHCCHHHHHEECCC
QHDPAPWFQLADMVVFPSRDAETLGNVILEAWTHGKPLVATAFRGAREIARHGDDAWVVP
CCCCCHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE
CDDAAALAAGIEHTLRDAGLQHALVTRGRARVAGEFSETGVVSQYRALYAQLADRR
CCCHHHHHHHHHHHHHHHCHHHHHHHCCCHHHCCCCHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSLHIIGSKEMGGAERWFVRFLAAMQRHGAAVEAVVRRGSALVGQMPAGLVPDTLPLRT
CCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCCCCCCCCCCHHH
VWDPLSRHELARRIARSDAPIVQTYMGRATRLTRLEPGRGKVHVSRLGGYYRLPPFAHAH
HHCHHHHHHHHHHHHHCCCCHHHHHHCCHHEEEEECCCCCEEEEEECCCEEECCCCHHHH
AWVGNTRGLCDWMIRGGLPAARVHHITNFAEPARTVPATELAALRARIGVDVDDCVLLTA
HHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHEEEC
GRLVEVKGQRYLINAFARLPREIDGRRLRLVVLGDGPLGAPLRHQAETAGVADRVIWAGW
CCEEEECCCHHHHHHHHHCCHHCCCCEEEEEEECCCCCCCCCHHHHHHCCHHHHHEECCC
QHDPAPWFQLADMVVFPSRDAETLGNVILEAWTHGKPLVATAFRGAREIARHGDDAWVVP
CCCCCHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEE
CDDAAALAAGIEHTLRDAGLQHALVTRGRARVAGEFSETGVVSQYRALYAQLADRR
CCCHHHHHHHHHHHHHHHCHHHHHHHCCCHHHCCCCHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]