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The map label for this gene is yadE [H]

Identifier: 119898615

GI number: 119898615

Start: 2556244

End: 2557083

Strand: Direct

Name: yadE [H]

Synonym: azo2324

Alternate gene names: 119898615

Gene position: 2556244-2557083 (Clockwise)

Preceding gene: 119898614

Following gene: 119898616

Centisome position: 58.41

GC content: 70.48

Gene sequence:

>840_bases
ATGCCCGTGCCCGCCCTGCAGCCCGACCGCATCAACATCCTGATGTACCACCAGGTGGGCGACTTCGGCCGCAGCCCCGC
GGTGCGCGCCCATCCGTCCACCTACTGCGACCGGCACCGCTTCGCGCGCCAGATGGCCTGGCTTGCGAGCCACGGCTACA
CCGTGCTGGACATGGACGCGGTGCTCGCCTGCCTGCGCGGCGAACGCGCGATTCCGCCGCGCGCAGTGGCGCTGACCTTC
GATGACGGCTACCGCAACTTCTACGAGCATGCGTGGCCGGTGCTGCAACGGCACGGTTTTCCGGCCACGGTGTATCTGAT
CGCCGACATGCTCGGCCAGCCGGCGCGCTGGTTTGCCGCCGACGGCCGCGACACGCCGCCGCTGATGGCACGTGCGGAAC
TGCTGGAACTGCGCCGCGCGGGCATCCTGTTCGGCTCGCACACTGCCGGCCACGTCAAGCTCGCGCAACACAGCGACGCG
GTGATCCACGACGAGCTGAGCCGGTCCAGGCAGGTGCTGGAAGACCTCTTCGGCGAGCGCATCGACCACTTCTGCTACCC
CTACGGCAGCCACGACCTGCGCGTGGTGGAGGCCGTCGCCGAGGCCGGCTACCTGACCGCGACCACCTGCAACCGCGCCC
CCGCCGGCCGCGACGATGACCCGCTGGTGCTGCCGCGCAAGGCGATTGCGCACGGCGACAACCTGCTCGGTTTCCTGTGG
CGGCTGCACATGAAGAACACCCCGCGCAAAACGCCGCTGCATCGTGCCGACGTCGCCGCGCCCGCGCCGGGCGTCGGCCG
CGGGCTTGCGCTGGCGGCCGGGGTCGACAATAACCAGTAG

Upstream 100 bases:

>100_bases
GTGACCCGCGGCCGCGCGCGGGTAGCGGGCGAATTCTCCGAAACCGGCGTGGTCTCGCAGTACCGCGCCCTTTACGCCCA
GCTCGCCGACCGCCGCTGAC

Downstream 100 bases:

>100_bases
ACGCTGCCGCGATGCCGCCCGGCAGCGGCACCCACCTGCCGGAGGCTCCGATGACCACCAACACCATCCGCCTGCACCGC
GTGCTGCGCGCCCCGTCCGA

Product: putative polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPVPALQPDRINILMYHQVGDFGRSPAVRAHPSTYCDRHRFARQMAWLASHGYTVLDMDAVLACLRGERAIPPRAVALTF
DDGYRNFYEHAWPVLQRHGFPATVYLIADMLGQPARWFAADGRDTPPLMARAELLELRRAGILFGSHTAGHVKLAQHSDA
VIHDELSRSRQVLEDLFGERIDHFCYPYGSHDLRVVEAVAEAGYLTATTCNRAPAGRDDDPLVLPRKAIAHGDNLLGFLW
RLHMKNTPRKTPLHRADVAAPAPGVGRGLALAAGVDNNQ

Sequences:

>Translated_279_residues
MPVPALQPDRINILMYHQVGDFGRSPAVRAHPSTYCDRHRFARQMAWLASHGYTVLDMDAVLACLRGERAIPPRAVALTF
DDGYRNFYEHAWPVLQRHGFPATVYLIADMLGQPARWFAADGRDTPPLMARAELLELRRAGILFGSHTAGHVKLAQHSDA
VIHDELSRSRQVLEDLFGERIDHFCYPYGSHDLRVVEAVAEAGYLTATTCNRAPAGRDDDPLVLPRKAIAHGDNLLGFLW
RLHMKNTPRKTPLHRADVAAPAPGVGRGLALAAGVDNNQ
>Mature_278_residues
PVPALQPDRINILMYHQVGDFGRSPAVRAHPSTYCDRHRFARQMAWLASHGYTVLDMDAVLACLRGERAIPPRAVALTFD
DGYRNFYEHAWPVLQRHGFPATVYLIADMLGQPARWFAADGRDTPPLMARAELLELRRAGILFGSHTAGHVKLAQHSDAV
IHDELSRSRQVLEDLFGERIDHFCYPYGSHDLRVVEAVAEAGYLTATTCNRAPAGRDDDPLVLPRKAIAHGDNLLGFLWR
LHMKNTPRKTPLHRADVAAPAPGVGRGLALAAGVDNNQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=239, Percent_Identity=30.5439330543933, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30959; Mature: 30827

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPALQPDRINILMYHQVGDFGRSPAVRAHPSTYCDRHRFARQMAWLASHGYTVLDMDA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHH
VLACLRGERAIPPRAVALTFDDGYRNFYEHAWPVLQRHGFPATVYLIADMLGQPARWFAA
HHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEC
DGRDTPPLMARAELLELRRAGILFGSHTAGHVKLAQHSDAVIHDELSRSRQVLEDLFGER
CCCCCCHHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
IDHFCYPYGSHDLRVVEAVAEAGYLTATTCNRAPAGRDDDPLVLPRKAIAHGDNLLGFLW
HHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEECCHHHHHCCCHHHHHHH
RLHMKNTPRKTPLHRADVAAPAPGVGRGLALAAGVDNNQ
HHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
PVPALQPDRINILMYHQVGDFGRSPAVRAHPSTYCDRHRFARQMAWLASHGYTVLDMDA
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHH
VLACLRGERAIPPRAVALTFDDGYRNFYEHAWPVLQRHGFPATVYLIADMLGQPARWFAA
HHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEC
DGRDTPPLMARAELLELRRAGILFGSHTAGHVKLAQHSDAVIHDELSRSRQVLEDLFGER
CCCCCCHHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
IDHFCYPYGSHDLRVVEAVAEAGYLTATTCNRAPAGRDDDPLVLPRKAIAHGDNLLGFLW
HHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEECCHHHHHCCCHHHHHHH
RLHMKNTPRKTPLHRADVAAPAPGVGRGLALAAGVDNNQ
HHHHCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]