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The map label for this gene is yecS [H]

Identifier: 119898555

GI number: 119898555

Start: 2481229

End: 2481897

Strand: Direct

Name: yecS [H]

Synonym: azo2264

Alternate gene names: 119898555

Gene position: 2481229-2481897 (Clockwise)

Preceding gene: 119898554

Following gene: 119898556

Centisome position: 56.7

GC content: 65.47

Gene sequence:

>669_bases
ATGGCCTATCAATTCGACTTTGCGCCGGTGTTCGACAACGCCGACCTGCTGCTGTCGGGCGCCGGCTTCACGCTGGCGCT
GACCGCGGTGGGCGCGGTATTCGGCATCGGCCTCGGCATCCTCGGCGCGATCTGCCGCGCCTGGAAGCTCGCCCCCTTCG
ATCGCATCTTCGGCGTCTATGTGGAGGTGATCCGCAACACGCCCTTCCTGGTGCAACTCTTTTTCATCTTCTTCGGCCTG
CCCTCGCTCGGCGTGAAGATGACCGAATGGCAGGCGGCGGTGCTGGCGATGGTGATCAACCTCGGCGCCTACTCCACCGA
GATCATCCGCGCCGGCATCCAGGCGACGCCGCGCGGCCAGATCGAGGCCGCCGAATCGCTGGCGCTGACGCGCAGCCAGA
TCTTCCGCCACGTGGTGCTGCGCCCGGCGCTGGCCAAGGTGTGGCCGGCGCTTACCAGCCAGGTGATCATCGTCATGCTG
GGTTCGGCGGTGTGCTCGCAGATCGCCACCGAAGAGCTGACCTTCGCCGCCAACTTCATCCAGTCGCGCAACTTCCGCGC
CTTCGAAACCTACTTCGTCACCACCGCGATCTACTTCGCGATGGCGCTGCTGATCCGCCAGCTGCTGATCCAGATCGGCC
AACGCTACGTGGTCGGGAGGGCACGCTGA

Upstream 100 bases:

>100_bases
CTCAACGCCCCGCTGCCGAAGGACCTGTAAGCGCAAGCCGCCGCGCGCGGGGCTGCGGCCTCGCGCGCATGCCTGTGATC
CGCCTTCAACGGACTCGACG

Downstream 100 bases:

>100_bases
TGTTCGTGCAATTCACCACCTGGGACATCGTCCGCAACCTGCTCGACGCCGGCAAATGGACGCTGGCGCTGTCGCTGATC
GCCTTCGTGCTCGGCGGCAT

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAYQFDFAPVFDNADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAWKLAPFDRIFGVYVEVIRNTPFLVQLFFIFFGL
PSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPRGQIEAAESLALTRSQIFRHVVLRPALAKVWPALTSQVIIVML
GSAVCSQIATEELTFAANFIQSRNFRAFETYFVTTAIYFAMALLIRQLLIQIGQRYVVGRAR

Sequences:

>Translated_222_residues
MAYQFDFAPVFDNADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAWKLAPFDRIFGVYVEVIRNTPFLVQLFFIFFGL
PSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPRGQIEAAESLALTRSQIFRHVVLRPALAKVWPALTSQVIIVML
GSAVCSQIATEELTFAANFIQSRNFRAFETYFVTTAIYFAMALLIRQLLIQIGQRYVVGRAR
>Mature_221_residues
AYQFDFAPVFDNADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAWKLAPFDRIFGVYVEVIRNTPFLVQLFFIFFGLP
SLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPRGQIEAAESLALTRSQIFRHVVLRPALAKVWPALTSQVIIVMLG
SAVCSQIATEELTFAANFIQSRNFRAFETYFVTTAIYFAMALLIRQLLIQIGQRYVVGRAR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=199, Percent_Identity=33.1658291457286, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=32.2429906542056, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1788646, Length=220, Percent_Identity=26.3636363636364, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=24.6636771300448, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=28.7081339712919, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48994930, Length=188, Percent_Identity=30.8510638297872, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786874, Length=153, Percent_Identity=30.718954248366, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87082239, Length=141, Percent_Identity=34.7517730496454, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24394; Mature: 24263

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQFDFAPVFDNADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAWKLAPFDRIFGVY
CCEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VEVIRNTPFLVQLFFIFFGLPSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPRGQ
HHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
IEAAESLALTRSQIFRHVVLRPALAKVWPALTSQVIIVMLGSAVCSQIATEELTFAANFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRNFRAFETYFVTTAIYFAMALLIRQLLIQIGQRYVVGRAR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
AYQFDFAPVFDNADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAWKLAPFDRIFGVY
CEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VEVIRNTPFLVQLFFIFFGLPSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPRGQ
HHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
IEAAESLALTRSQIFRHVVLRPALAKVWPALTSQVIIVMLGSAVCSQIATEELTFAANFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSRNFRAFETYFVTTAIYFAMALLIRQLLIQIGQRYVVGRAR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]