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The map label for this gene is gumC [H]

Identifier: 119898532

GI number: 119898532

Start: 2456144

End: 2457553

Strand: Reverse

Name: gumC [H]

Synonym: azo2241

Alternate gene names: 119898532

Gene position: 2457553-2456144 (Counterclockwise)

Preceding gene: 119898533

Following gene: 119898531

Centisome position: 56.16

GC content: 70.14

Gene sequence:

>1410_bases
ATGAGCATCCAGCAACTCTTTCTCGTCCTGCGCGCCAACCTGCGGCTCATCGCCAGCGTGCTGTGTGCCGTCGTGGCGCT
CGTGATGGCGGTCAGCCTGCTGTTGCCGCGCAAATACACCGCGCAGGGCGAGGTGGTGGTGGACGTGCGGGGCGCCGATC
CGATCCAGGGCGCGGTGATGCAGGGCAGCCTGATCCCCGGTTACCTCGCCACCCAGGTCGACATCCTTACCTCCGAGCGC
GTCGCGCGGCGCGTCGCCGATCTCCTCAAGCTGAAGGACAACGCCGAATTTCGCGCGGCGTGGGAAAGCGAGCGCGGCGG
CGTCGGCAGCTACGAGGACTGGCTGGCGCGCACGCTGGGCGCGGCGCTCACGGTCAAACCCTCGCGCGACAGCAGCGTGC
TCGGCATCGCCTTCACCGCGCGCGATCCGGCCTTTGCCGCCGCGGCCGCGAACGCCTTTGCGCAGGCTTACATCGACACC
TCGCTCGAACTCAAGGTGGAGCCGGCGCGGCAGTACTCGGACTGGTTCAACGATCGCAGCAGCGGCGTGCGGGAAGAACT
CGAAGCCGCCCAACGCCGCCTGTCCGATTACCAGCAGCAGCACCGCATCCTGACCGGCACCGACGAGCGGCTGGACGTCG
AGAGCGAGCGCCTCGCGCAGCTTTCCGCGCAACTCGTGGCGGTGCAGGCGCAGCGGGCGGAAAGCCGCTCGCGCACCAGC
CAGCCCGGCTCGGTGGACACGTTGCCGGAGGTGCTGCAGAACGGGTTGATCCAGGGGCTGAAGACGGACATCGCGCGGCT
CGAGGCGCAGCGCGGTCAGTCGCTGCGCCGGCTGGGGCCCAACCATCCGGAGGTCGCACGCATCGACGCCGAACTCGGCT
CGCTGCGCAGCCGGGTGGGTGCTGAAACCGCGCGCGTAGCCGGTTCGCTCGCTACCGCGGCGCGCATGAACGATGCGCGC
GAAGCGGAGATTGCCGCCGCGGTGGAGGCGCAGAAGGCCAAGGTGCTGGAACTGAAGGCGCATCAAAGCCGCATCGGCGT
GCTCCAGCGCGACGTGGAGAACGCCCAGCGCGCCTATGACATGGTGACCCAGCGCTACGCCCAGACCAGTCTCGAAAGCC
AGACCCGCCTGACCAATGTCGTCGTGCTCAGTCCGGCGGCCGAGCCGGTCGTTCCCTCCACGCCCAACCTGCCGCTCAAT
CTGCTGCTGTCCATCGTCGTGGGCGGGCTGCTGGGCGTGGGCGCCGCGCTGTGGCGCGAACTGCGCCACCCGCGCATCCG
CGGCGAAGGCGAACTCGGTCAGTTGCTCGGAGTGCCGGTGCTGGCGGTGTTGCCGCCGCGGCCGGCGCTCGCAGGCGTGG
GCCTGCGCCGGCTGCTGCCGGCGGTGCCCCAGGCACGCCGTTTGCGCTGA

Upstream 100 bases:

>100_bases
GGCGATCAACTGAAAGTCTTCGAACCGGGGCTGGAGGAAATCCTGCGTCCGGATGACGTCATCTACGTCAAGGAAAGCCT
GTTCTGACCAGGAGCGCGCC

Downstream 100 bases:

>100_bases
GCGTCTCAGCGTCCCATCTGCTGCACCCGGAGGCGTCTTTCCATGAATGCTCCGCACAAACTTCCGCCGCAGCCGCAAGA
GCGGCCGATCGGCGCCATCC

Product: putative exopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSIQQLFLVLRANLRLIASVLCAVVALVMAVSLLLPRKYTAQGEVVVDVRGADPIQGAVMQGSLIPGYLATQVDILTSER
VARRVADLLKLKDNAEFRAAWESERGGVGSYEDWLARTLGAALTVKPSRDSSVLGIAFTARDPAFAAAAANAFAQAYIDT
SLELKVEPARQYSDWFNDRSSGVREELEAAQRRLSDYQQQHRILTGTDERLDVESERLAQLSAQLVAVQAQRAESRSRTS
QPGSVDTLPEVLQNGLIQGLKTDIARLEAQRGQSLRRLGPNHPEVARIDAELGSLRSRVGAETARVAGSLATAARMNDAR
EAEIAAAVEAQKAKVLELKAHQSRIGVLQRDVENAQRAYDMVTQRYAQTSLESQTRLTNVVVLSPAAEPVVPSTPNLPLN
LLLSIVVGGLLGVGAALWRELRHPRIRGEGELGQLLGVPVLAVLPPRPALAGVGLRRLLPAVPQARRLR

Sequences:

>Translated_469_residues
MSIQQLFLVLRANLRLIASVLCAVVALVMAVSLLLPRKYTAQGEVVVDVRGADPIQGAVMQGSLIPGYLATQVDILTSER
VARRVADLLKLKDNAEFRAAWESERGGVGSYEDWLARTLGAALTVKPSRDSSVLGIAFTARDPAFAAAAANAFAQAYIDT
SLELKVEPARQYSDWFNDRSSGVREELEAAQRRLSDYQQQHRILTGTDERLDVESERLAQLSAQLVAVQAQRAESRSRTS
QPGSVDTLPEVLQNGLIQGLKTDIARLEAQRGQSLRRLGPNHPEVARIDAELGSLRSRVGAETARVAGSLATAARMNDAR
EAEIAAAVEAQKAKVLELKAHQSRIGVLQRDVENAQRAYDMVTQRYAQTSLESQTRLTNVVVLSPAAEPVVPSTPNLPLN
LLLSIVVGGLLGVGAALWRELRHPRIRGEGELGQLLGVPVLAVLPPRPALAGVGLRRLLPAVPQARRLR
>Mature_468_residues
SIQQLFLVLRANLRLIASVLCAVVALVMAVSLLLPRKYTAQGEVVVDVRGADPIQGAVMQGSLIPGYLATQVDILTSERV
ARRVADLLKLKDNAEFRAAWESERGGVGSYEDWLARTLGAALTVKPSRDSSVLGIAFTARDPAFAAAAANAFAQAYIDTS
LELKVEPARQYSDWFNDRSSGVREELEAAQRRLSDYQQQHRILTGTDERLDVESERLAQLSAQLVAVQAQRAESRSRTSQ
PGSVDTLPEVLQNGLIQGLKTDIARLEAQRGQSLRRLGPNHPEVARIDAELGSLRSRVGAETARVAGSLATAARMNDARE
AEIAAAVEAQKAKVLELKAHQSRIGVLQRDVENAQRAYDMVTQRYAQTSLESQTRLTNVVVLSPAAEPVVPSTPNLPLNL
LLSIVVGGLLGVGAALWRELRHPRIRGEGELGQLLGVPVLAVLPPRPALAGVGLRRLLPAVPQARRLR

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.solanacearum epsB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702
- InterPro:   IPR005700
- InterPro:   IPR003856 [H]

Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 50802; Mature: 50671

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQQLFLVLRANLRLIASVLCAVVALVMAVSLLLPRKYTAQGEVVVDVRGADPIQGAVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHH
QGSLIPGYLATQVDILTSERVARRVADLLKLKDNAEFRAAWESERGGVGSYEDWLARTLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCCCHHHHHHHHHC
AALTVKPSRDSSVLGIAFTARDPAFAAAAANAFAQAYIDTSLELKVEPARQYSDWFNDRS
CEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCC
SGVREELEAAQRRLSDYQQQHRILTGTDERLDVESERLAQLSAQLVAVQAQRAESRSRTS
CHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QPGSVDTLPEVLQNGLIQGLKTDIARLEAQRGQSLRRLGPNHPEVARIDAELGSLRSRVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEHHHHHHHHHHHHC
AETARVAGSLATAARMNDAREAEIAAAVEAQKAKVLELKAHQSRIGVLQRDVENAQRAYD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVTQRYAQTSLESQTRLTNVVVLSPAAEPVVPSTPNLPLNLLLSIVVGGLLGVGAALWRE
HHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRHPRIRGEGELGQLLGVPVLAVLPPRPALAGVGLRRLLPAVPQARRLR
HCCCCCCCCCCHHHHHCCCCEEECCCCCHHHHCCHHHHHHCCCCHHCCC
>Mature Secondary Structure 
SIQQLFLVLRANLRLIASVLCAVVALVMAVSLLLPRKYTAQGEVVVDVRGADPIQGAVM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHH
QGSLIPGYLATQVDILTSERVARRVADLLKLKDNAEFRAAWESERGGVGSYEDWLARTLG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCCCHHHHHHHHHC
AALTVKPSRDSSVLGIAFTARDPAFAAAAANAFAQAYIDTSLELKVEPARQYSDWFNDRS
CEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCC
SGVREELEAAQRRLSDYQQQHRILTGTDERLDVESERLAQLSAQLVAVQAQRAESRSRTS
CHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QPGSVDTLPEVLQNGLIQGLKTDIARLEAQRGQSLRRLGPNHPEVARIDAELGSLRSRVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEHHHHHHHHHHHHC
AETARVAGSLATAARMNDAREAEIAAAVEAQKAKVLELKAHQSRIGVLQRDVENAQRAYD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVTQRYAQTSLESQTRLTNVVVLSPAAEPVVPSTPNLPLNLLLSIVVGGLLGVGAALWRE
HHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRHPRIRGEGELGQLLGVPVLAVLPPRPALAGVGLRRLLPAVPQARRLR
HCCCCCCCCCCHHHHHCCCCEEECCCCCHHHHCCHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8226645; 8226646; 8246891; 11481431 [H]