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The map label for this gene is rpfG [H]

Identifier: 119898491

GI number: 119898491

Start: 2410091

End: 2411239

Strand: Direct

Name: rpfG [H]

Synonym: azo2200

Alternate gene names: 119898491

Gene position: 2410091-2411239 (Clockwise)

Preceding gene: 119898490

Following gene: 119898492

Centisome position: 55.07

GC content: 63.88

Gene sequence:

>1149_bases
ATGCTGAAGGCCCAATTCATCTCCCCGTCGCCGCCCCCTTCCACGCGAGAAAACCTTTCCTCGCGCCTGCAAGACCTCCA
CGGCATCATCGCCACGCGCCATCCCGAGATCAACCGTATCGCGCTCGCCACGTATGACGAAGACACCGACCTGCTGAAGA
CCTTCATCAACAGCACCTACGGCGACGCCACGCCGTTCGGGCGCTACGAAGCGCGCCTGAGCGAGGTGCCCTCGCTGCAG
CGGTTGGCGCTCAGCGGCGAAAAGCGCATCCTGCAGAACCTGCCCGAAGCCCTGGCGAGCCGCGATGCAACCCACAGCCG
CTGGCTCACCGCGGCGGGTTTTCACAGCAGCTACACGGTGCCGATCTACCACGGCGAGCGTTTCGTCGCGTTCCTGTTCT
TTGATGCGGATCGCCCGAACGCGTTTTCGGACGAAGTGCTGCGCTATCTCGACCTGATCGGCTATCTCGCCGCCCAGATG
TACCTGACCGGGCTCGTTGCCGTGCGGACGCTGATCAGCACGGTGGAAGTCGCCCGCGGACTCACGCGCATCCGCGACAT
CGAAACCGGCCATCATCTGGACCGCATCGCCCACTACACCCGCATCATCACGCGCGGCCTTGCCGACATCGTGGAACTGG
ACGACGAGTTCATCGAGCACGTGTTCCTGTTCGCCCCGCTGCACGACATCGGCAAGATCGGCGTTCCCGACAGCATCCTG
CAGAAGCCCGGGCCGCTCACACTCGAAGAACGCAAGATCATGCAGAGCCACGTCGAGCTTGGCGTCAGCGTGTTCGACCG
CATGGTGCAGGACATCGGCCTGCCCGAAGACCGCACCGTGCGCATCATGCGCAACATCATCGCTTACCACCACGAAGCGC
TGGATGGCACCGGCTATCCCTACCGCCTGAGCGGTGATGCGGTGCCGCTCGAAGCGCGCATCGTCGCGATCGCGGACATC
TTCGACGCCCTGACCAGCGAACGCCCTTACAAGCCGCGCTGGCCCAACGAGGCCGCCTTCGCCGAACTGTCGTCGATGGC
CGAACGCGGAAAGATCGACGCCGAGTGCGTACGCGCCTTCCTCAACAACAGGGCGATGGTCGAAGACACCCAGGCCCGCT
TTGCCGAAAACCTGAATCCCGCCTTCTGA

Upstream 100 bases:

>100_bases
CTGGAGACGACTGCGCGCGAACTGCAATTGCTGGTCGCCCATTTCGAAACCCGACTTTGATCCGCGGCAACGCAAGCGGA
CCACTCCGAGAACAGCGCCC

Downstream 100 bases:

>100_bases
CCTCAAGGGGGGCAACGCGCTTTGCGCTGACGCAAACCTCAGCGCAAACAGAGGGCCCTATAATGCGGCCCAGTCCCTCT
GCAAGGCATGTCATGACGGC

Product: HD-domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLKAQFISPSPPPSTRENLSSRLQDLHGIIATRHPEINRIALATYDEDTDLLKTFINSTYGDATPFGRYEARLSEVPSLQ
RLALSGEKRILQNLPEALASRDATHSRWLTAAGFHSSYTVPIYHGERFVAFLFFDADRPNAFSDEVLRYLDLIGYLAAQM
YLTGLVAVRTLISTVEVARGLTRIRDIETGHHLDRIAHYTRIITRGLADIVELDDEFIEHVFLFAPLHDIGKIGVPDSIL
QKPGPLTLEERKIMQSHVELGVSVFDRMVQDIGLPEDRTVRIMRNIIAYHHEALDGTGYPYRLSGDAVPLEARIVAIADI
FDALTSERPYKPRWPNEAAFAELSSMAERGKIDAECVRAFLNNRAMVEDTQARFAENLNPAF

Sequences:

>Translated_382_residues
MLKAQFISPSPPPSTRENLSSRLQDLHGIIATRHPEINRIALATYDEDTDLLKTFINSTYGDATPFGRYEARLSEVPSLQ
RLALSGEKRILQNLPEALASRDATHSRWLTAAGFHSSYTVPIYHGERFVAFLFFDADRPNAFSDEVLRYLDLIGYLAAQM
YLTGLVAVRTLISTVEVARGLTRIRDIETGHHLDRIAHYTRIITRGLADIVELDDEFIEHVFLFAPLHDIGKIGVPDSIL
QKPGPLTLEERKIMQSHVELGVSVFDRMVQDIGLPEDRTVRIMRNIIAYHHEALDGTGYPYRLSGDAVPLEARIVAIADI
FDALTSERPYKPRWPNEAAFAELSSMAERGKIDAECVRAFLNNRAMVEDTQARFAENLNPAF
>Mature_382_residues
MLKAQFISPSPPPSTRENLSSRLQDLHGIIATRHPEINRIALATYDEDTDLLKTFINSTYGDATPFGRYEARLSEVPSLQ
RLALSGEKRILQNLPEALASRDATHSRWLTAAGFHSSYTVPIYHGERFVAFLFFDADRPNAFSDEVLRYLDLIGYLAAQM
YLTGLVAVRTLISTVEVARGLTRIRDIETGHHLDRIAHYTRIITRGLADIVELDDEFIEHVFLFAPLHDIGKIGVPDSIL
QKPGPLTLEERKIMQSHVELGVSVFDRMVQDIGLPEDRTVRIMRNIIAYHHEALDGTGYPYRLSGDAVPLEARIVAIADI
FDALTSERPYKPRWPNEAAFAELSSMAERGKIDAECVRAFLNNRAMVEDTQARFAENLNPAF

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 43028; Mature: 43028

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKAQFISPSPPPSTRENLSSRLQDLHGIIATRHPEINRIALATYDEDTDLLKTFINSTY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCC
GDATPFGRYEARLSEVPSLQRLALSGEKRILQNLPEALASRDATHSRWLTAAGFHSSYTV
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCEE
PIYHGERFVAFLFFDADRPNAFSDEVLRYLDLIGYLAAQMYLTGLVAVRTLISTVEVARG
EEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRIRDIETGHHLDRIAHYTRIITRGLADIVELDDEFIEHVFLFAPLHDIGKIGVPDSIL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHH
QKPGPLTLEERKIMQSHVELGVSVFDRMVQDIGLPEDRTVRIMRNIIAYHHEALDGTGYP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
YRLSGDAVPLEARIVAIADIFDALTSERPYKPRWPNEAAFAELSSMAERGKIDAECVRAF
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
LNNRAMVEDTQARFAENLNPAF
HCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKAQFISPSPPPSTRENLSSRLQDLHGIIATRHPEINRIALATYDEDTDLLKTFINSTY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCC
GDATPFGRYEARLSEVPSLQRLALSGEKRILQNLPEALASRDATHSRWLTAAGFHSSYTV
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCCCEE
PIYHGERFVAFLFFDADRPNAFSDEVLRYLDLIGYLAAQMYLTGLVAVRTLISTVEVARG
EEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRIRDIETGHHLDRIAHYTRIITRGLADIVELDDEFIEHVFLFAPLHDIGKIGVPDSIL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHH
QKPGPLTLEERKIMQSHVELGVSVFDRMVQDIGLPEDRTVRIMRNIIAYHHEALDGTGYP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
YRLSGDAVPLEARIVAIADIFDALTSERPYKPRWPNEAAFAELSSMAERGKIDAECVRAF
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
LNNRAMVEDTQARFAENLNPAF
HCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]