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The map label for this gene is ccdB [H]

Identifier: 119898349

GI number: 119898349

Start: 2257836

End: 2258222

Strand: Reverse

Name: ccdB [H]

Synonym: azo2058

Alternate gene names: 119898349

Gene position: 2258222-2257836 (Counterclockwise)

Preceding gene: 119898350

Following gene: 119898347

Centisome position: 51.6

GC content: 62.79

Gene sequence:

>387_bases
ATGCAGCGCTACAGCAAGAGAATCGTCGTCGTCGACGACAATGAAGTGATCCGGATGGCCCTGCGCGCCCTGTTGCGCCA
GGCCGGTTTCAATGTGGTGGGCGAGGGGCGGGACGGTGACATGGCGCTCGACCTCGCTGCACGCCTTCAGCCCGACCTCG
TGTGCCTCGATGTGATGATGCCGAAGCGAAACGGCCTCGAGGCCCTCGACGAACTACGTGCCAAATTCCCTGACATCAAG
GTCCTGATGGTCACAGGGCAGACCGACCGCGACAGCGTCGGTGAGATGGTCCGCAAGGGTGCGGCCGGCATCGTCGTCAA
ACCCTTCAATGCCGCACGTATCATCGAGCTGGTTGAGCGGACGCTCGGCCTGACCGCGACCCAATAG

Upstream 100 bases:

>100_bases
CGGCCGACGACGCGCTGTACCGCGCCAAGGCGGCGGGGCGCAACCGTGTGGTCACGCATTCGGTGGACACGAAAGGAATG
GAAGCGCGCACAATCTGAGC

Downstream 100 bases:

>100_bases
CCTTCAGAACACGTTCTTCCATTCCCGCAACGCGGCGAAGCACGCCAGCGGCGTGTCTGGCGTCGTACCGGTATGGGCGG
CAACGCCTGCAACAACACCG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQRYSKRIVVVDDNEVIRMALRALLRQAGFNVVGEGRDGDMALDLAARLQPDLVCLDVMMPKRNGLEALDELRAKFPDIK
VLMVTGQTDRDSVGEMVRKGAAGIVVKPFNAARIIELVERTLGLTATQ

Sequences:

>Translated_128_residues
MQRYSKRIVVVDDNEVIRMALRALLRQAGFNVVGEGRDGDMALDLAARLQPDLVCLDVMMPKRNGLEALDELRAKFPDIK
VLMVTGQTDRDSVGEMVRKGAAGIVVKPFNAARIIELVERTLGLTATQ
>Mature_128_residues
MQRYSKRIVVVDDNEVIRMALRALLRQAGFNVVGEGRDGDMALDLAARLQPDLVCLDVMMPKRNGLEALDELRAKFPDIK
VLMVTGQTDRDSVGEMVRKGAAGIVVKPFNAARIIELVERTLGLTATQ

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=121, Percent_Identity=32.2314049586777, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=36.4406779661017, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1790299, Length=121, Percent_Identity=29.7520661157025, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 14137; Mature: 14137

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRYSKRIVVVDDNEVIRMALRALLRQAGFNVVGEGRDGDMALDLAARLQPDLVCLDVMM
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEC
PKRNGLEALDELRAKFPDIKVLMVTGQTDRDSVGEMVRKGAAGIVVKPFNAARIIELVER
CCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
TLGLTATQ
HHCCCCCC
>Mature Secondary Structure
MQRYSKRIVVVDDNEVIRMALRALLRQAGFNVVGEGRDGDMALDLAARLQPDLVCLDVMM
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEC
PKRNGLEALDELRAKFPDIKVLMVTGQTDRDSVGEMVRKGAAGIVVKPFNAARIIELVER
CCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
TLGLTATQ
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]