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The map label for this gene is radC2 [C]

Identifier: 119898338

GI number: 119898338

Start: 2246568

End: 2247158

Strand: Direct

Name: radC2 [C]

Synonym: azo2047

Alternate gene names: 119898338

Gene position: 2246568-2247158 (Clockwise)

Preceding gene: 119898337

Following gene: 119898339

Centisome position: 51.34

GC content: 63.96

Gene sequence:

>591_bases
ATGTCGTCCTTCTATTCCTCACCCACCGCCCTGGCGGATGCCGCATTGCTCGAGCGCTTCTTCGGCCCGGAAGCCGAGGA
CGTCTGGGAAGGCTGCGACGGATCGTGGAGCAAGGTCGTCGAGCTTGCCCGGGAACCTCGTACGCCCGCATGGGACGCCT
TGGCCTGCGCCATCGAAATCTTGCATCGCAGTTTTGCCGAACAACTGTCGGCCCGGAATGTGCTCGACTCCCCGGGTGTC
GTCAGACAGTTTCTGCGCACCTTCTTCGAGGGCAAGCCCTACGAGATCTTCGTCGTGCTGTATCTCGATGCCCAGAATCG
TCTTATCCGCGCCGAGGAGGCGTTTCGCGGCACGCTGACCCAGACCAGCGTCTATCCGCGCGAGATCCTGCGCCGGTCGC
TCGAGCTGCACGCGGCCGGCGTGATCTTCTCGCATCAGCATCCATCCGGCGTGTGTGAGCCCTCGAGCGCCGACGAGGTG
CTCACGAACATGCTCAAGTCGGCGCTCACCCTGGTCGACGTGCGCGTCCTGGATCACATCGTGGTGGCCGGCGATCGGGC
CGTATCCTTCGCCGAAACGGGCCGTCTCTGA

Upstream 100 bases:

>100_bases
CCTTCGGGCCCGGGGTTCTGCTTCAGTTTCACATCCATCCCGTGGGGAGTCGCTTCCCACGGGGGGACACGGCTCTCCGC
ATTTGTTTGGGGAGACGCCG

Downstream 100 bases:

>100_bases
GGTCGCCCCAAGACCCTGCGCCGGCAACGCGCCGACCTGCCGAGGACACGACTCCCCGATCACCTTCCCCATCAACTGCG
GCCCAGGCACCTCGTGCGTG

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSSFYSSPTALADAALLERFFGPEAEDVWEGCDGSWSKVVELAREPRTPAWDALACAIEILHRSFAEQLSARNVLDSPGV
VRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEV
LTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL

Sequences:

>Translated_196_residues
MSSFYSSPTALADAALLERFFGPEAEDVWEGCDGSWSKVVELAREPRTPAWDALACAIEILHRSFAEQLSARNVLDSPGV
VRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEV
LTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL
>Mature_195_residues
SSFYSSPTALADAALLERFFGPEAEDVWEGCDGSWSKVVELAREPRTPAWDALACAIEILHRSFAEQLSARNVLDSPGVV
RQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVL
TNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI87082300, Length=136, Percent_Identity=40.4411764705882, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI2367100, Length=129, Percent_Identity=48.062015503876, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI1788312, Length=129, Percent_Identity=45.7364341085271, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1788997, Length=156, Percent_Identity=41.025641025641, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 21783; Mature: 21652

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFYSSPTALADAALLERFFGPEAEDVWEGCDGSWSKVVELAREPRTPAWDALACAIEI
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCHH
QTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVDVRVLDHI
HCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVAGDRAVSFAETGRL
HHCCCCHHHHHHCCCC
>Mature Secondary Structure 
SSFYSSPTALADAALLERFFGPEAEDVWEGCDGSWSKVVELAREPRTPAWDALACAIEI
CCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHCCHH
QTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVDVRVLDHI
HCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVAGDRAVSFAETGRL
HHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA