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The map label for this gene is yfdR [H]

Identifier: 119898339

GI number: 119898339

Start: 2247594

End: 2248190

Strand: Direct

Name: yfdR [H]

Synonym: azo2048

Alternate gene names: 119898339

Gene position: 2247594-2248190 (Clockwise)

Preceding gene: 119898338

Following gene: 119898340

Centisome position: 51.36

GC content: 68.17

Gene sequence:

>597_bases
ATGAAGCCTTACCCCACCGGATCCCGGACAGGGCGGCGGCCCCTTTCGCCCGCCGACAACCCGGCTTGGCCGGGCGCCAG
CGCCGAAGCGATACGGCGCGCGACGCATTACATCCGTATCGAGGACATCGCCCACGCGCTCGCCAACGCCTGCTGCATCC
AGGGCCAGACGAAGGCGTTCTACTCGGTCGCACAGCACAACTACCTCGCCAGCATGCTGGTCCCGCCACAGGACGCCCTC
GCCGCACTGCTGCTCCACACCGACGAAACCCTCGAGCGGCTGCTCCCCGAATACCTCGAGATCGAAGGCCACAGCGCTGC
GGAGGTGCTCGCTAGGTTCGGCGCCCCGGCCACCCCGCCGCTCTCGGTCGAATGCGCCGACCTGGTCCTCAGGGCGACCG
AACAGCGAGATCTGGGGCCGAGTTCCGACGCCACCAAGAACGAATCCGCGGGCGTCCCGCCCTTGACGCTGAAGATCCAG
CCCCTGCCGCCGATCGTGGCGAAACACCTCTTCCTCGATCGCTACTACGAGCTCCGGCCCGAGGCGGACGCGGAGCGGCT
CCGCCATATGGAGGCAAAGCGGAGGGCCGCGAAATGA

Upstream 100 bases:

>100_bases
CGACATCCCTCCTGATTCCTCGCGCGTCGACCGCCATGAATCCCTCATGGCCATTGGCACGCCGCAGCCGGAAACACGAA
CACCAGCAAGGAGAAGCTAG

Downstream 100 bases:

>100_bases
CCGTCTACGTCGACGCCCTGGGGCTCAACGGTTGGCAGCTGCACGGCCGCCCTGTCCAGAGCTGCCACATGTTCTGCGAT
GGCGAGGATCACGAAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKPYPTGSRTGRRPLSPADNPAWPGASAEAIRRATHYIRIEDIAHALANACCIQGQTKAFYSVAQHNYLASMLVPPQDAL
AALLLHTDETLERLLPEYLEIEGHSAAEVLARFGAPATPPLSVECADLVLRATEQRDLGPSSDATKNESAGVPPLTLKIQ
PLPPIVAKHLFLDRYYELRPEADAERLRHMEAKRRAAK

Sequences:

>Translated_198_residues
MKPYPTGSRTGRRPLSPADNPAWPGASAEAIRRATHYIRIEDIAHALANACCIQGQTKAFYSVAQHNYLASMLVPPQDAL
AALLLHTDETLERLLPEYLEIEGHSAAEVLARFGAPATPPLSVECADLVLRATEQRDLGPSSDATKNESAGVPPLTLKIQ
PLPPIVAKHLFLDRYYELRPEADAERLRHMEAKRRAAK
>Mature_198_residues
MKPYPTGSRTGRRPLSPADNPAWPGASAEAIRRATHYIRIEDIAHALANACCIQGQTKAFYSVAQHNYLASMLVPPQDAL
AALLLHTDETLERLLPEYLEIEGHSAAEVLARFGAPATPPLSVECADLVLRATEQRDLGPSSDATKNESAGVPPLTLKIQ
PLPPIVAKHLFLDRYYELRPEADAERLRHMEAKRRAAK

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=150, Percent_Identity=36.6666666666667, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21747; Mature: 21747

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYPTGSRTGRRPLSPADNPAWPGASAEAIRRATHYIRIEDIAHALANACCIQGQTKAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YSVAQHNYLASMLVPPQDALAALLLHTDETLERLLPEYLEIEGHSAAEVLARFGAPATPP
HHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
LSVECADLVLRATEQRDLGPSSDATKNESAGVPPLTLKIQPLPPIVAKHLFLDRYYELRP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
EADAERLRHMEAKRRAAK
CCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPYPTGSRTGRRPLSPADNPAWPGASAEAIRRATHYIRIEDIAHALANACCIQGQTKAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YSVAQHNYLASMLVPPQDALAALLLHTDETLERLLPEYLEIEGHSAAEVLARFGAPATPP
HHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
LSVECADLVLRATEQRDLGPSSDATKNESAGVPPLTLKIQPLPPIVAKHLFLDRYYELRP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCC
EADAERLRHMEAKRRAAK
CCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]