Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

Click here to switch to the map view.

The map label for this gene is ucpA [C]

Identifier: 119898278

GI number: 119898278

Start: 2186445

End: 2187704

Strand: Direct

Name: ucpA [C]

Synonym: azo1987

Alternate gene names: 119898278

Gene position: 2186445-2187704 (Clockwise)

Preceding gene: 119898277

Following gene: 119898279

Centisome position: 49.96

GC content: 68.81

Gene sequence:

>1260_bases
ATGACCGAACCGCTCGCCAAACCGAAAAAGAAGAACCCGGTCCAGCGCACCCGGCTCGCCACCCTGCCGCCGGTGCCGCG
CAGCCGTACCGCGCTCGGCCTCACCCGCGCGGCGGCCGAAGGCGTGTTCGAGATGCAGGTGTGCGCCGAATGCGAAACCG
TGCAGTACCCGCCGCGCGAAGTCTGCGGCCACTGCCTGTCGGAACACCTCGCGTGGAAGCCGGTGAACAACCGCGGCACG
CTGATCGCCAGCACCACGCTGCGCCACAGCAACGACCTCTACTTCCGCGAACGCCTGCCGTGGCGCGTCGGCACCGTCAA
GATGGATGCCGGCCCCTCGGTGGTCGCCCACGTGCATGAGGACTGCGCCGAACCCGGTACCGACGGCAGCCGCGTCCGCC
TCACCCTCAAGCTCGACCGCAGCGGCCAGGCGGTGCTCCACGCCCTGCCGGAAAAGGACACCCCCAACATGAACGATGCC
CCGCAGATGCGCGAATCGACCTGCGATCCCAAGTTCCGCCGCGTGCTGGTCACCGACGGCAAGTCGGCGGTCGGCATGGC
AGTCGCCAAGGCGATGCTGGACGCCGGTGCCAGCGCGGTCTTCCTCGGCGACTCCTCGACGTGGAAGACGGTGCCCGCCT
TCGACAAGCTGGTCGCGTCGGATGCCCGCATCCAGGTGGTCGAGCTGGACGTCACCGACACCGATTCGGTGGATCGCCTC
GCCGCATCGATCGGCGGCAAGGTCGAGATCCTGGTGAATACCGCTGCCTACCTCAGGGATGGCGGCATCCTCGGCCGCAA
GGACATCAACCTCGCCCGCGACGCAATGGAAGTGAACGTGCTCGGCCTGATGCGCCTCGCCCAGGCCTTTGCGCCGGGCA
TGTGCTTCCGCGCCGCGGACGGCACCAACAACGCGGTGGCGTGGGTGAACGTGCTCTCCATCCACGCGCTGGCCGCCCTG
CCCTCGCGTGGCGCCTGGTCCGCCTCGATGGCGGCAGCGCTGTCGGCCTCGCAAACCCTGCGCGCCGAACTGCGCGGCGC
CGGCGTGCGCGTGCTGAACGTCTTCCCCGGCCCGGTCGAAGAAGAGTGGGAACAGCTCACCCCGCCGCCCAAGGTCGCGC
CGTCGGCGGTGGCCAAGGCCATCGTCAAGGGGCTGCAGGACGGCATCGAGGATGCGTATGTCGGTGATATCGCGGAAGAG
ATCCGTGGCCGCCTGCGCGAGAACCACAAAGCGGTCGAACGCGAGCTTGGCAACGGCTAA

Upstream 100 bases:

>100_bases
AGGTGAAGGACGCGAAGATCGGCATGGTGTCCGGCTTCGGCATGATCAACTACGACCGCGGCCTGTGTTCCGGCGCCGCC
GTCCTCGAACGGGGGCAGGC

Downstream 100 bases:

>100_bases
GAGGGGTTTTGCCCCCTCCCCTTCAAGGGGAGGGTTGGGGTGGGGATGGGGTCACCGCTGACAACCTGACCCCATCCCCC
TCCCAGCCTCCCCCTTGAAA

Product: short-chain dehydrogenase family protein

Products: NA

Alternate protein names: Short Chain Dehydrogenase; Short-Chain Dehydrogenase Family Protein; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Short-Chain Dehydrogenase/Reductase Sdr; Short Chain Dehydrogenase Family Protein; Short-Chain Alcohol Dehydrogenase; Short-Chain Dehydrogenase/Reductase

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTEPLAKPKKKNPVQRTRLATLPPVPRSRTALGLTRAAAEGVFEMQVCAECETVQYPPREVCGHCLSEHLAWKPVNNRGT
LIASTTLRHSNDLYFRERLPWRVGTVKMDAGPSVVAHVHEDCAEPGTDGSRVRLTLKLDRSGQAVLHALPEKDTPNMNDA
PQMRESTCDPKFRRVLVTDGKSAVGMAVAKAMLDAGASAVFLGDSSTWKTVPAFDKLVASDARIQVVELDVTDTDSVDRL
AASIGGKVEILVNTAAYLRDGGILGRKDINLARDAMEVNVLGLMRLAQAFAPGMCFRAADGTNNAVAWVNVLSIHALAAL
PSRGAWSASMAAALSASQTLRAELRGAGVRVLNVFPGPVEEEWEQLTPPPKVAPSAVAKAIVKGLQDGIEDAYVGDIAEE
IRGRLRENHKAVERELGNG

Sequences:

>Translated_419_residues
MTEPLAKPKKKNPVQRTRLATLPPVPRSRTALGLTRAAAEGVFEMQVCAECETVQYPPREVCGHCLSEHLAWKPVNNRGT
LIASTTLRHSNDLYFRERLPWRVGTVKMDAGPSVVAHVHEDCAEPGTDGSRVRLTLKLDRSGQAVLHALPEKDTPNMNDA
PQMRESTCDPKFRRVLVTDGKSAVGMAVAKAMLDAGASAVFLGDSSTWKTVPAFDKLVASDARIQVVELDVTDTDSVDRL
AASIGGKVEILVNTAAYLRDGGILGRKDINLARDAMEVNVLGLMRLAQAFAPGMCFRAADGTNNAVAWVNVLSIHALAAL
PSRGAWSASMAAALSASQTLRAELRGAGVRVLNVFPGPVEEEWEQLTPPPKVAPSAVAKAIVKGLQDGIEDAYVGDIAEE
IRGRLRENHKAVERELGNG
>Mature_418_residues
TEPLAKPKKKNPVQRTRLATLPPVPRSRTALGLTRAAAEGVFEMQVCAECETVQYPPREVCGHCLSEHLAWKPVNNRGTL
IASTTLRHSNDLYFRERLPWRVGTVKMDAGPSVVAHVHEDCAEPGTDGSRVRLTLKLDRSGQAVLHALPEKDTPNMNDAP
QMRESTCDPKFRRVLVTDGKSAVGMAVAKAMLDAGASAVFLGDSSTWKTVPAFDKLVASDARIQVVELDVTDTDSVDRLA
ASIGGKVEILVNTAAYLRDGGILGRKDINLARDAMEVNVLGLMRLAQAFAPGMCFRAADGTNNAVAWVNVLSIHALAALP
SRGAWSASMAAALSASQTLRAELRGAGVRVLNVFPGPVEEEWEQLTPPPKVAPSAVAKAIVKGLQDGIEDAYVGDIAEEI
RGRLRENHKAVERELGNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45027; Mature: 44896

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPLAKPKKKNPVQRTRLATLPPVPRSRTALGLTRAAAEGVFEMQVCAECETVQYPPRE
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH
VCGHCLSEHLAWKPVNNRGTLIASTTLRHSNDLYFRERLPWRVGTVKMDAGPSVVAHVHE
HHHHHHHHHCEECCCCCCCCEEEEEEECCCCCCEEHHCCCEEEEEEEECCCCHHHHHHHH
DCAEPGTDGSRVRLTLKLDRSGQAVLHALPEKDTPNMNDAPQMRESTCDPKFRRVLVTDG
HHCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCHHHEEEEEECC
KSAVGMAVAKAMLDAGASAVFLGDSSTWKTVPAFDKLVASDARIQVVELDVTDTDSVDRL
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHH
AASIGGKVEILVNTAAYLRDGGILGRKDINLARDAMEVNVLGLMRLAQAFAPGMCFRAAD
HHHCCCEEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
GTNNAVAWVNVLSIHALAALPSRGAWSASMAAALSASQTLRAELRGAGVRVLNVFPGPVE
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
EEWEQLTPPPKVAPSAVAKAIVKGLQDGIEDAYVGDIAEEIRGRLRENHKAVERELGNG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEPLAKPKKKNPVQRTRLATLPPVPRSRTALGLTRAAAEGVFEMQVCAECETVQYPPRE
CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH
VCGHCLSEHLAWKPVNNRGTLIASTTLRHSNDLYFRERLPWRVGTVKMDAGPSVVAHVHE
HHHHHHHHHCEECCCCCCCCEEEEEEECCCCCCEEHHCCCEEEEEEEECCCCHHHHHHHH
DCAEPGTDGSRVRLTLKLDRSGQAVLHALPEKDTPNMNDAPQMRESTCDPKFRRVLVTDG
HHCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCHHHEEEEEECC
KSAVGMAVAKAMLDAGASAVFLGDSSTWKTVPAFDKLVASDARIQVVELDVTDTDSVDRL
CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCHHHHH
AASIGGKVEILVNTAAYLRDGGILGRKDINLARDAMEVNVLGLMRLAQAFAPGMCFRAAD
HHHCCCEEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
GTNNAVAWVNVLSIHALAALPSRGAWSASMAAALSASQTLRAELRGAGVRVLNVFPGPVE
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
EEWEQLTPPPKVAPSAVAKAIVKGLQDGIEDAYVGDIAEEIRGRLRENHKAVERELGNG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA