| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is mhpE [H]
Identifier: 119898263
GI number: 119898263
Start: 2168585
End: 2169613
Strand: Reverse
Name: mhpE [H]
Synonym: azo1972
Alternate gene names: 119898263
Gene position: 2169613-2168585 (Counterclockwise)
Preceding gene: 119898264
Following gene: 119898262
Centisome position: 49.58
GC content: 65.89
Gene sequence:
>1029_bases ATGGACCTTCGCGGCACACGCATCACCGTTCACGACATGACCCTGCGCGACGGCATGCACCCCAAGCGCCACCTGATGAC GCTCGAGCAGATGAAGACCATCGCCCAGGGGCTCGATCAAGCGGGCATCCCGCTGATCGAAGTCACCCACGGCGACGGTC TCGGCGGCAGCTCGGTGAACTACGGCTTTCCGGCCCACACCGACGAGGAATACCTCGGCGCGGTGATCCCGCTGATGAAG CAGGCCAAGGTCTCGGCACTGCTGCTGCCGGGCATCGGCACCGTCGATCACCTGAAGATGGCGCACGAACTCGGGGTGAA CACCATCCGTGTGGCCACCCACTGCACCGAAGCCGACGTCTCCGAACAGCACATCAGTTACGCGAGAAAGCTCGGCATGG ACACCGTGGGCTTTCTGATGATGGCCCACATGAACAGCCCCGAAGGGCTGGTGCAGCAGGCGAAGCTGATGGAGAGCTAC GGCGCCAACTGCATCTACGTGACCGATTCGGCCGGGCATCTGCTGCCGGATACGGTCAAGGCGCGCATCAGCGCCGTGCG GGATGCGCTGAAACCCGAAACCGAACTCGGCTTCCACGGCCACCACAACCTCGCGATGGGCGTCGCCAACTCCATCGCCG CGATCGAAGCCGGGGCGACCCGCATCGACGCCGCGGCCGCAGGGCTGGGCGCCGGCGCCGGCAACACGCCGATGGAAGTG CTGATCGCGGTGTGCGACCTGATGGGGATCGAGACCGGCGTCGATGTGTTCAAGATCCAGGACGTCGCCGAAGACCTCGT GGTGCCCATCATGGACTTCCCGATCCGCATCGACCGCGATGCGCTGACGCTGGGCTATGCCGGCGTGTACGGCTCCTTCC TGCTCTTTGCCAAGCGCGCCGAGAAGAAGTACGGCGTGCCGGCGCGCGAGATCCTGGTCGAGATGGGCCGGCGCGGCATG GTCGGCGGCCAGGAGGACATGATCGAGGACACCGCGATCACCCTGGCGAAGGCGAGCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases CCGGTGCCCGCACCGCCGAGATGTTCGCCGAGGAAATCCTCGCCGGCCGCCTCACCCTCGAATCCAACCGCGCCGTGCTG GCTTGAATCAGGAGAAAACC
Downstream 100 bases:
>100_bases ACGCGACCACACGGCAGGCCGCGCCGTCGGCGCGGCCCACATCCAAGGAGAGCGAGACATGAAAACCATGAAGGCGGCCC GCCTGCACGAGATCGGCGGC
Product: 4-hydroxy-2-ketovalerate aldolase
Products: NA
Alternate protein names: HOA 3; 4-hydroxy-2-keto-pentanoic acid aldolase 3; 4-hydroxy-2-oxopentanoate aldolase 3 [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MDLRGTRITVHDMTLRDGMHPKRHLMTLEQMKTIAQGLDQAGIPLIEVTHGDGLGGSSVNYGFPAHTDEEYLGAVIPLMK QAKVSALLLPGIGTVDHLKMAHELGVNTIRVATHCTEADVSEQHISYARKLGMDTVGFLMMAHMNSPEGLVQQAKLMESY GANCIYVTDSAGHLLPDTVKARISAVRDALKPETELGFHGHHNLAMGVANSIAAIEAGATRIDAAAAGLGAGAGNTPMEV LIAVCDLMGIETGVDVFKIQDVAEDLVVPIMDFPIRIDRDALTLGYAGVYGSFLLFAKRAEKKYGVPAREILVEMGRRGM VGGQEDMIEDTAITLAKASAAA
Sequences:
>Translated_342_residues MDLRGTRITVHDMTLRDGMHPKRHLMTLEQMKTIAQGLDQAGIPLIEVTHGDGLGGSSVNYGFPAHTDEEYLGAVIPLMK QAKVSALLLPGIGTVDHLKMAHELGVNTIRVATHCTEADVSEQHISYARKLGMDTVGFLMMAHMNSPEGLVQQAKLMESY GANCIYVTDSAGHLLPDTVKARISAVRDALKPETELGFHGHHNLAMGVANSIAAIEAGATRIDAAAAGLGAGAGNTPMEV LIAVCDLMGIETGVDVFKIQDVAEDLVVPIMDFPIRIDRDALTLGYAGVYGSFLLFAKRAEKKYGVPAREILVEMGRRGM VGGQEDMIEDTAITLAKASAAA >Mature_342_residues MDLRGTRITVHDMTLRDGMHPKRHLMTLEQMKTIAQGLDQAGIPLIEVTHGDGLGGSSVNYGFPAHTDEEYLGAVIPLMK QAKVSALLLPGIGTVDHLKMAHELGVNTIRVATHCTEADVSEQHISYARKLGMDTVGFLMMAHMNSPEGLVQQAKLMESY GANCIYVTDSAGHLLPDTVKARISAVRDALKPETELGFHGHHNLAMGVANSIAAIEAGATRIDAAAAGLGAGAGNTPMEV LIAVCDLMGIETGVDVFKIQDVAEDLVVPIMDFPIRIDRDALTLGYAGVYGSFLLFAKRAEKKYGVPAREILVEMGRRGM VGGQEDMIEDTAITLAKASAAA
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1786548, Length=333, Percent_Identity=57.3573573573574, Blast_Score=383, Evalue=1e-108, Organism=Escherichia coli, GI1786261, Length=295, Percent_Identity=25.4237288135593, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - ProDom: PD005364 [H]
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like [H]
EC number: =4.1.3.39 [H]
Molecular weight: Translated: 36454; Mature: 36454
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRGTRITVHDMTLRDGMHPKRHLMTLEQMKTIAQGLDQAGIPLIEVTHGDGLGGSSVN CCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC YGFPAHTDEEYLGAVIPLMKQAKVSALLLPGIGTVDHLKMAHELGVNTIRVATHCTEADV CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCC SEQHISYARKLGMDTVGFLMMAHMNSPEGLVQQAKLMESYGANCIYVTDSAGHLLPDTVK HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH ARISAVRDALKPETELGFHGHHNLAMGVANSIAAIEAGATRIDAAAAGLGAGAGNTPMEV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHH LIAVCDLMGIETGVDVFKIQDVAEDLVVPIMDFPIRIDRDALTLGYAGVYGSFLLFAKRA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHEECHHHHHHHHHHHHHHH EKKYGVPAREILVEMGRRGMVGGQEDMIEDTAITLAKASAAA HHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLRGTRITVHDMTLRDGMHPKRHLMTLEQMKTIAQGLDQAGIPLIEVTHGDGLGGSSVN CCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC YGFPAHTDEEYLGAVIPLMKQAKVSALLLPGIGTVDHLKMAHELGVNTIRVATHCTEADV CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCC SEQHISYARKLGMDTVGFLMMAHMNSPEGLVQQAKLMESYGANCIYVTDSAGHLLPDTVK HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH ARISAVRDALKPETELGFHGHHNLAMGVANSIAAIEAGATRIDAAAAGLGAGAGNTPMEV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHH LIAVCDLMGIETGVDVFKIQDVAEDLVVPIMDFPIRIDRDALTLGYAGVYGSFLLFAKRA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHEECHHHHHHHHHHHHHHH EKKYGVPAREILVEMGRRGMVGGQEDMIEDTAITLAKASAAA HHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA