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The map label for this gene is ompH [H]

Identifier: 119898191

GI number: 119898191

Start: 2083149

End: 2083649

Strand: Reverse

Name: ompH [H]

Synonym: azo1900

Alternate gene names: 119898191

Gene position: 2083649-2083149 (Counterclockwise)

Preceding gene: 119898192

Following gene: 119898190

Centisome position: 47.61

GC content: 61.88

Gene sequence:

>501_bases
GTGAAAGTCAGCACCATTTCCGTGCTCGCGTTGGCCCTGATCGGCATCAGCCAGGCGGCACAGGCAGAGACCAAGATCGG
CTTCGTCAATTCGGACCGCGTCATGCGCGAAGCCGCGCCGGCGATGCGGGCCCAGCAGCGGCTGGAGAAGGAGTTCGAAA
AGCGCGACCAGGAACTGCAGCGCATGGCGAACGACCTCAAGTCGATGCAGAACGAGCTGGAAAGCGCATCCACCACGCTG
GCCGAATCCGACCGCCGCAACAAGGAACGCGCCTTCAACGACCTGAACCGCGATTTCCAGCGCAAGCAGCGCGAGTTCCG
TGAAGACCTCAACCAGCGCCGCAACGAAGAACTCGCCTCGGTGCTCGAGAAGGCCAACCGCACCGTCAAGCAGATCGCCG
AAGCGGAGAAGTTCGACGTGATCCTGCAGGAAGCGGTCTACGCCAGCCCGCGCATCGACATCACGGACAAGGTCATCAAG
TCCCTGTCCGAAGGCAAGTAA

Upstream 100 bases:

>100_bases
GCCGATCAAGAAAGACAGCGGCGACGACATCCAGCGGTTCCAGTTCCAGTTGGGCAGCATTTTCTGATTGCGGCCAGTTC
GAGATTTGTTGGAGGCATAA

Downstream 100 bases:

>100_bases
GCGCTTCGCCCCGATGTTTCGCCTCGATGAGCTGGCCGCGCGGCTGGGCGGGGATGTCGTCGGCGATCCGGCGACCACGG
TGCGGCGCGTCGCCACGCTG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKVSTISVLALALIGISQAAQAETKIGFVNSDRVMREAAPAMRAQQRLEKEFEKRDQELQRMANDLKSMQNELESASTTL
AESDRRNKERAFNDLNRDFQRKQREFREDLNQRRNEELASVLEKANRTVKQIAEAEKFDVILQEAVYASPRIDITDKVIK
SLSEGK

Sequences:

>Translated_166_residues
MKVSTISVLALALIGISQAAQAETKIGFVNSDRVMREAAPAMRAQQRLEKEFEKRDQELQRMANDLKSMQNELESASTTL
AESDRRNKERAFNDLNRDFQRKQREFREDLNQRRNEELASVLEKANRTVKQIAEAEKFDVILQEAVYASPRIDITDKVIK
SLSEGK
>Mature_166_residues
MKVSTISVLALALIGISQAAQAETKIGFVNSDRVMREAAPAMRAQQRLEKEFEKRDQELQRMANDLKSMQNELESASTTL
AESDRRNKERAFNDLNRDFQRKQREFREDLNQRRNEELASVLEKANRTVKQIAEAEKFDVILQEAVYASPRIDITDKVIK
SLSEGK

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 19073; Mature: 19073

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSTISVLALALIGISQAAQAETKIGFVNSDRVMREAAPAMRAQQRLEKEFEKRDQELQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMANDLKSMQNELESASTTLAESDRRNKERAFNDLNRDFQRKQREFREDLNQRRNEELAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLEKANRTVKQIAEAEKFDVILQEAVYASPRIDITDKVIKSLSEGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKVSTISVLALALIGISQAAQAETKIGFVNSDRVMREAAPAMRAQQRLEKEFEKRDQELQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMANDLKSMQNELESASTTLAESDRRNKERAFNDLNRDFQRKQREFREDLNQRRNEELAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLEKANRTVKQIAEAEKFDVILQEAVYASPRIDITDKVIKSLSEGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]