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The map label for this gene is oma [H]

Identifier: 119898192

GI number: 119898192

Start: 2083683

End: 2085962

Strand: Reverse

Name: oma [H]

Synonym: azo1901

Alternate gene names: 119898192

Gene position: 2085962-2083683 (Counterclockwise)

Preceding gene: 119898193

Following gene: 119898191

Centisome position: 47.67

GC content: 63.07

Gene sequence:

>2280_bases
ATGGCCCTCTTTGCCGCTGCGCCGGCATTCGCCTTCGATCCCTTCGTGGTCAAGGACATCCGTGTCGAAGGCATCCAGCG
CACCGAGGCGGGCACGGTTTTCAGCTATCTGCCGGTCAAGGTCGGCGACACTTTCAACGAAGCTCAGGCGGCCGAGGCGA
TCCGGGCGCTGTTCGCCACCGGCTTCTTCCGCGACGTCAAGATCGAAGTCGAAAACCAGGTGCTCGTGGTGCTGGTGGAC
GAGCGGCCGGCCATCGCCCAGATCGACTTCGTCGGCATCAAGGAATTCGACAAGGACGCGTTGAAGAAGAGCCTGCGCGA
GGTCGGTCTTGCCGAGTCGCGCATCTTCGACCGCGCGCTGCTCGACCGCGCCGAACAGGAACTCAAGCGCCAGTACCTCT
CGCGCGGCAAGTACTCGGCGACGATCACCACGACCGTCACGCCGCTGGAGCGTAACCGCGTCAGCATCAACTTCAACGTG
GATGAAGGCGATGTCGCGCGCATCCGCCAGATCAGCATCGTCGGCGCCAAGGTGTTCGACGAAGACGACCTGCTCGCACG
CTTCCAGCTCACCACGCCGGGCTGGCTCACCTGGTACACCAAGAACGACCAGTATTCGCGCCAGAAGCTTTCGGCCGACC
TGGAAAACCTGCGTTCCTACTACCTCGACCGCGGCTACCTCGACTTCAACATCGACTCCACCCAAGTGTCGATCACGCCG
GACAAGAAGGACATCTACATCACGGTGAACATCACCGAGGGCGAGCGCTACACGGTGACCGGGGTACGCTTCACCGGCGA
CCTGATCCTGCCGGAATCCGAATATCTCGGCCTGACGACGGTAAAGCCGGGCGACACCTTCTCCCGCGAGCGTCTGACCG
AAACCACCAAGGCGATCACCGACCGCCTCGGCAACGAGGGCTACGCCTTCGCCAACGTCAATGCCGCCCCCGAAGTCGAC
AAGGACAAGCGTGAAGTGTCTTTCACCGTGTTCGTCGATCCGGGCCGCCGGGTGTACGTGCGCCGGATCAATGTCGGTGG
CAATACCAAGACCCGCGACGAAGTCGTGCGCCGCGAGTTGCGCCAGATGGAAGGTGCCTGGTACGACGCCGCTGCCATCA
ACCGTTCCCGCACCCGTGTCGACCGCCTCGGCTTCTTCGACGAGGTCAACGTCGAAACGCCACCGGTGCCCGGCACCACC
GACCAGGTGGACGTGAACATGACGGTGAAGGAGCGCGCGACCGGCAACCTGATGCTCGGCGCCGGCTTCTCCAGCTCCGA
AAAGGTCGTGCTGTCGGCGTCCATCTCGCAGCAGAACCTGTTCGGCAGCGGCAACGCGATGACGCTCGGCCTCAACACCA
GCAGCTCCAGCCGCACCTACGCACTGTCCTTCACCAATCCGTACTACACCGTCGATGGCGTCAGTCTCGGTTGGGATCTC
TATCACCGCACTTACGACCCGTCGGAGTCCTACTCGGTGTCGCCGTACAAGACGGTCTCCACCGGCGCCGGCCTGCGCCT
GGGTTACCCGATCGGTGAAGACGACAACATCAACTTCGGCCTCACCGTCGACCGCACCAAGATCACCACCTACGAGGAAA
GCCCCGAGCAGTACAAGGGCTTCTGCATCGACTACGGCTGCAGCAGCGACGACGGCATCGGCAACGTCACGGTCAACAGC
CTTACTGCCAGTGCCGGCTGGGCGCGTGACAGCCGCGACAGCTACCTCTACCCCCGCCAGGGCGTCTATCAGCGCATTCA
TGGCGAAGTGGCAGTGCCGCCGGGCAAGCTGCGCTACACCAAGCTCAATTACCAGTACCAGCACTGGTTCCCGCTCGGCC
GTGACTACGCGCTGATGCTGAATGGCGAAGCCGGCTGGGCCAAGGGTTACGGCGGCAAGGAAGTGCCGTTCTACAAGAAC
TTCTACGCCGGCGGTATCGGTTCGGTGCGCGGCTTCGAACAGAGCACGCTGGGCCCGAAGGATTCCGAGGGCGACGCGCT
CGGCGGCACCCGCAAGCTGATCGGCAACGCGGAGTTCTTCTTCCCGATGCCGGGCGCCGGCACCGACCGCTCGTTCCGGA
TTTCGGCCTTCGTCGACGCCGGCTATGTATGGGGCGAGGATCAAAAGCTCAAGTTCGGCGACTTGCGCTACAGTACCGGG
CTTGCGTTCGCGTGGAGTTCGCCGATCGGCCCGCTGAAGTTCAGCCTCGGCATGCCGATCAAGAAAGACAGCGGCGACGA
CATCCAGCGGTTCCAGTTCCAGTTGGGCAGCATTTTCTGA

Upstream 100 bases:

>100_bases
TCCTCGCAATGCTCATGGCATTCGCCTTCTACAACGACATAACCCGTCTCATTTCCGGCTAGTGACCCGCATGAAACACA
AGCTTCTCTCAGGGCTCGTG

Downstream 100 bases:

>100_bases
TTGCGGCCAGTTCGAGATTTGTTGGAGGCATAAGTGAAAGTCAGCACCATTTCCGTGCTCGCGTTGGCCCTGATCGGCAT
CAGCCAGGCGGCACAGGCAG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 759; Mature: 758

Protein sequence:

>759_residues
MALFAAAPAFAFDPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTFNEAQAAEAIRALFATGFFRDVKIEVENQVLVVLVD
ERPAIAQIDFVGIKEFDKDALKKSLREVGLAESRIFDRALLDRAEQELKRQYLSRGKYSATITTTVTPLERNRVSINFNV
DEGDVARIRQISIVGAKVFDEDDLLARFQLTTPGWLTWYTKNDQYSRQKLSADLENLRSYYLDRGYLDFNIDSTQVSITP
DKKDIYITVNITEGERYTVTGVRFTGDLILPESEYLGLTTVKPGDTFSRERLTETTKAITDRLGNEGYAFANVNAAPEVD
KDKREVSFTVFVDPGRRVYVRRINVGGNTKTRDEVVRRELRQMEGAWYDAAAINRSRTRVDRLGFFDEVNVETPPVPGTT
DQVDVNMTVKERATGNLMLGAGFSSSEKVVLSASISQQNLFGSGNAMTLGLNTSSSSRTYALSFTNPYYTVDGVSLGWDL
YHRTYDPSESYSVSPYKTVSTGAGLRLGYPIGEDDNINFGLTVDRTKITTYEESPEQYKGFCIDYGCSSDDGIGNVTVNS
LTASAGWARDSRDSYLYPRQGVYQRIHGEVAVPPGKLRYTKLNYQYQHWFPLGRDYALMLNGEAGWAKGYGGKEVPFYKN
FYAGGIGSVRGFEQSTLGPKDSEGDALGGTRKLIGNAEFFFPMPGAGTDRSFRISAFVDAGYVWGEDQKLKFGDLRYSTG
LAFAWSSPIGPLKFSLGMPIKKDSGDDIQRFQFQLGSIF

Sequences:

>Translated_759_residues
MALFAAAPAFAFDPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTFNEAQAAEAIRALFATGFFRDVKIEVENQVLVVLVD
ERPAIAQIDFVGIKEFDKDALKKSLREVGLAESRIFDRALLDRAEQELKRQYLSRGKYSATITTTVTPLERNRVSINFNV
DEGDVARIRQISIVGAKVFDEDDLLARFQLTTPGWLTWYTKNDQYSRQKLSADLENLRSYYLDRGYLDFNIDSTQVSITP
DKKDIYITVNITEGERYTVTGVRFTGDLILPESEYLGLTTVKPGDTFSRERLTETTKAITDRLGNEGYAFANVNAAPEVD
KDKREVSFTVFVDPGRRVYVRRINVGGNTKTRDEVVRRELRQMEGAWYDAAAINRSRTRVDRLGFFDEVNVETPPVPGTT
DQVDVNMTVKERATGNLMLGAGFSSSEKVVLSASISQQNLFGSGNAMTLGLNTSSSSRTYALSFTNPYYTVDGVSLGWDL
YHRTYDPSESYSVSPYKTVSTGAGLRLGYPIGEDDNINFGLTVDRTKITTYEESPEQYKGFCIDYGCSSDDGIGNVTVNS
LTASAGWARDSRDSYLYPRQGVYQRIHGEVAVPPGKLRYTKLNYQYQHWFPLGRDYALMLNGEAGWAKGYGGKEVPFYKN
FYAGGIGSVRGFEQSTLGPKDSEGDALGGTRKLIGNAEFFFPMPGAGTDRSFRISAFVDAGYVWGEDQKLKFGDLRYSTG
LAFAWSSPIGPLKFSLGMPIKKDSGDDIQRFQFQLGSIF
>Mature_758_residues
ALFAAAPAFAFDPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTFNEAQAAEAIRALFATGFFRDVKIEVENQVLVVLVDE
RPAIAQIDFVGIKEFDKDALKKSLREVGLAESRIFDRALLDRAEQELKRQYLSRGKYSATITTTVTPLERNRVSINFNVD
EGDVARIRQISIVGAKVFDEDDLLARFQLTTPGWLTWYTKNDQYSRQKLSADLENLRSYYLDRGYLDFNIDSTQVSITPD
KKDIYITVNITEGERYTVTGVRFTGDLILPESEYLGLTTVKPGDTFSRERLTETTKAITDRLGNEGYAFANVNAAPEVDK
DKREVSFTVFVDPGRRVYVRRINVGGNTKTRDEVVRRELRQMEGAWYDAAAINRSRTRVDRLGFFDEVNVETPPVPGTTD
QVDVNMTVKERATGNLMLGAGFSSSEKVVLSASISQQNLFGSGNAMTLGLNTSSSSRTYALSFTNPYYTVDGVSLGWDLY
HRTYDPSESYSVSPYKTVSTGAGLRLGYPIGEDDNINFGLTVDRTKITTYEESPEQYKGFCIDYGCSSDDGIGNVTVNSL
TASAGWARDSRDSYLYPRQGVYQRIHGEVAVPPGKLRYTKLNYQYQHWFPLGRDYALMLNGEAGWAKGYGGKEVPFYKNF
YAGGIGSVRGFEQSTLGPKDSEGDALGGTRKLIGNAEFFFPMPGAGTDRSFRISAFVDAGYVWGEDQKLKFGDLRYSTGL
AFAWSSPIGPLKFSLGMPIKKDSGDDIQRFQFQLGSIF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=442, Percent_Identity=24.4343891402715, Blast_Score=79, Evalue=2e-14,
Organism=Escherichia coli, GI1786374, Length=804, Percent_Identity=38.681592039801, Blast_Score=527, Evalue=1e-150,
Organism=Escherichia coli, GI1790666, Length=434, Percent_Identity=21.889400921659, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 84635; Mature: 84503

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFAAAPAFAFDPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTFNEAQAAEAIRALFAT
CCEEECCCCCCCCCEEEEEEEECCEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHH
GFFRDVKIEVENQVLVVLVDERPAIAQIDFVGIKEFDKDALKKSLREVGLAESRIFDRAL
CCEEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LDRAEQELKRQYLSRGKYSATITTTVTPLERNRVSINFNVDEGDVARIRQISIVGAKVFD
HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEEEEEEC
EDDLLARFQLTTPGWLTWYTKNDQYSRQKLSADLENLRSYYLDRGYLDFNIDSTQVSITP
CCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECC
DKKDIYITVNITEGERYTVTGVRFTGDLILPESEYLGLTTVKPGDTFSRERLTETTKAIT
CCCEEEEEEEEECCCEEEEEEEEEECCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
DRLGNEGYAFANVNAAPEVDKDKREVSFTVFVDPGRRVYVRRINVGGNTKTRDEVVRREL
HHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHH
RQMEGAWYDAAAINRSRTRVDRLGFFDEVNVETPPVPGTTDQVDVNMTVKERATGNLMLG
HHHCCCEEEHHHCCCHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEE
AGFSSSEKVVLSASISQQNLFGSGNAMTLGLNTSSSSRTYALSFTNPYYTVDGVSLGWDL
CCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEECCEEECHHH
YHRTYDPSESYSVSPYKTVSTGAGLRLGYPIGEDDNINFGLTVDRTKITTYEESPEQYKG
HCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEEEECEEEEEECCCCHHHCC
FCIDYGCSSDDGIGNVTVNSLTASAGWARDSRDSYLYPRQGVYQRIHGEVAVPPGKLRYT
EEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCCEEEE
KLNYQYQHWFPLGRDYALMLNGEAGWAKGYGGKEVPFYKNFYAGGIGSVRGFEQSTLGPK
EECEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCC
DSEGDALGGTRKLIGNAEFFFPMPGAGTDRSFRISAFVDAGYVWGEDQKLKFGDLRYSTG
CCCCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEECCEEECCCCEEEECCEEEECC
LAFAWSSPIGPLKFSLGMPIKKDSGDDIQRFQFQLGSIF
EEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ALFAAAPAFAFDPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTFNEAQAAEAIRALFAT
CEEECCCCCCCCCEEEEEEEECCEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHH
GFFRDVKIEVENQVLVVLVDERPAIAQIDFVGIKEFDKDALKKSLREVGLAESRIFDRAL
CCEEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHH
LDRAEQELKRQYLSRGKYSATITTTVTPLERNRVSINFNVDEGDVARIRQISIVGAKVFD
HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEEEEEEC
EDDLLARFQLTTPGWLTWYTKNDQYSRQKLSADLENLRSYYLDRGYLDFNIDSTQVSITP
CCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECC
DKKDIYITVNITEGERYTVTGVRFTGDLILPESEYLGLTTVKPGDTFSRERLTETTKAIT
CCCEEEEEEEEECCCEEEEEEEEEECCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
DRLGNEGYAFANVNAAPEVDKDKREVSFTVFVDPGRRVYVRRINVGGNTKTRDEVVRREL
HHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHH
RQMEGAWYDAAAINRSRTRVDRLGFFDEVNVETPPVPGTTDQVDVNMTVKERATGNLMLG
HHHCCCEEEHHHCCCHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEE
AGFSSSEKVVLSASISQQNLFGSGNAMTLGLNTSSSSRTYALSFTNPYYTVDGVSLGWDL
CCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEECCEEECHHH
YHRTYDPSESYSVSPYKTVSTGAGLRLGYPIGEDDNINFGLTVDRTKITTYEESPEQYKG
HCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCEEEEEEEECEEEEEECCCCHHHCC
FCIDYGCSSDDGIGNVTVNSLTASAGWARDSRDSYLYPRQGVYQRIHGEVAVPPGKLRYT
EEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCCEEEE
KLNYQYQHWFPLGRDYALMLNGEAGWAKGYGGKEVPFYKNFYAGGIGSVRGFEQSTLGPK
EECEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCC
DSEGDALGGTRKLIGNAEFFFPMPGAGTDRSFRISAFVDAGYVWGEDQKLKFGDLRYSTG
CCCCCCCCCCHHHHCCCEEEEECCCCCCCCCEEEEEEEECCEEECCCCEEEECCEEEECC
LAFAWSSPIGPLKFSLGMPIKKDSGDDIQRFQFQLGSIF
EEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]