| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is ybbP [H]
Identifier: 119897897
GI number: 119897897
Start: 1765274
End: 1767766
Strand: Direct
Name: ybbP [H]
Synonym: azo1606
Alternate gene names: 119897897
Gene position: 1765274-1767766 (Clockwise)
Preceding gene: 119897896
Following gene: 119897899
Centisome position: 40.34
GC content: 71.12
Gene sequence:
>2493_bases ATGAACACGCTCCGGCTCGCTTTCCGCATGATGCTGCGCGACCTGCGCGCGGGCGAATTGCACCTGCTGGGGCTGGCGAT CGTGGTCGCGGTCGCCAGCCTTACGAGTGTCGGCTTTCTCGCCGACCGCGTCGGGCGCGGGCTGGACCGCGAGGCAAACC AGTTGCTCGGTGGTGACCTGCTGCTGCGCGCGGACCGGCCGTGGTCCGAGGAGTTTGCCGACGAGGCGCGGCGGCGCGGG CTGGAAGCGGTGGTCACGGTGCAATTCACCAGTATGGCGAGCACGCCGGACGCCACTCAGCTGGCGGGGGTCAAGGTGGT ACAGCCGGGCTATCCCTTGCGCGGCGCGTTGCGCATCGCGCCGGCGCCCAATACACCGGACGCGGTGGCGGGGCGGGTGC CGGAGCGCGGCGAAGCCTGGCTGGACGAGCGGCTGTTCGCCGAGTTGGGTCTGAAAGTGGGCGACACGGTGGAGCTGGGC CGGGTGGCTTTCCGCGTGGGCGCCATGGTCAGCTTCGAATCCGATCGCGGTAGCAATTTCTTCAGCCTGCTGCCGCGTGC CATGTTCAATGCCGCGGATCTGGAAGCGACCGGCCTGCTCGGCGTCGGTAGCCGCGCAACCTGGCTGCTTCAACTCGCAG GGCCTCAGGCCGCCGTCGATGCCTATGCCGAATGGGCGCGTCCGCGGTTGGGGCGCGGCCAGCGCATCGAAACGATCGAG AACGCCCGCCCCGAGGTGCGCGACATGCTCGACCGCGCGCAGCGCTTCCTGCGCCTGTCGGCGCTGCTGGCGGTGATCCT CGCGGCGGTCGCGGTGGGGCTGTCGGCGCGGCGCTTCATGCGGCGTCACCTCGACGCCTGCGCGGTGATGCGGTGCCTGG GTGCCCGCCAGCGTCAGGTGCTGGGTGTGATGGCCGGCGAATTCCTGGTGTTCGGCCTGATCGCGGCGCTGTGCGGCAGC GCCCTGGGCTGGCTCACGCAGTGGGCGCTCGCGGGCGGCGTCAGCGAACTCGTCGCCAGCGAGCTGCCGCAGCCCTCGCT GCTGCCGCTGGCGCACGGCCTCGTGGTCGGCATCGCGCTGCTGGTCGGCTTCGTGCTGCCGCAGCTGCTGCGGTTGGGGC GGGTGTCGACGCTGCGGGTGTTGCGGCGCGAATTCGACGTGGTCGAAGCCGCCAGCAGCGCCGCCTGGGGCTTCGGTGGC GTTGCGCTGCTTGGGCTGGTGTTCTGGATCGCGGGCGACCTGCGCCTCGGGGCCTTCGCGGCGGCCGGCTTTGTCGCCGC GCTCGGCGTCTTCGCGCTGGCCGCTTGGTGGGGGCTGCGGGCTGTCACCCGCCTGAAGGGTGGCGCCGGGGTGCGCGGCG GCTGGCGGTATGGCCTGGCCGCGCTCGGCCGGCGCATGGGCGGCAGCGTGATCCAGGTGACGGCGCTCGGGCTCGGCATG ACCGCGTTGCTGCTGCTGACGCTGATCCGCGGCGACCTGCTGGACAACTGGCAGCGGATGGCGCCGCCGGACGCGCCCAA TCGCTTCATCATCAACATCCAGCCCGACCAGCGCGAGGGCATCGCGGCCCGCTTCGTCGAAGCCGGCCTGCCGGCTCCGG ATATCCAGCCGATGATTCGCGCCCGCCTGACCGCCATCAACGACGCGCCGGTGAAGGCGTCGGACTTCCAGGATGAACGC ACCCGCCGGCTTGCGGAGCGCGAGTTCAACCTGTCCTACGACAGCCGCCTGCCGTCCGGCAACCGCGTCTCCGCCGGGCG CTGGCACGGCGACGCCGCGCAGCCGCAGTTGTCGGTGGAAGCCGGGTTGGCGGAGACCTTCGGCCTGAAGGTCGGAGACC GCGTGCGCTTCGAGATTGCGGAACGCAGCGTGGAGGCGCCGATCACCAGCGTGCGCGCGCTGTCGTGGGATTCGATGCGG GTCAATTTCTTCTTCATCGCCTCGCCCGGCTGGCTGGAGGACTATCCGGCCAGTCTCATCACCAGTTTCCATCTGCCGCC GGAGCGGGCGGCGTTCTCCACCGCGCTGGTCAATGCCTTTCCCAACCTGTCGGTCATCGACGTGACGGCGGTGCTTGCGC AGGTGCACACGATGGTCGACAAGCTGGTGCTCATCGTCCAGTTCGTGTTCGGTTTTGCGGTGCTGGCCGGGCTGGTGGTG CTGTTCGCGGCGCTGCAATCCACGCATGACGAGCGCGAGTTCGAACTGGCGGTGCTGCGTACCCTGGGCGCCCGCAACCG TCAGGTACGGCAGGCGCTGCTGGCGGAATTCCTGGTCCTCGGCGGCGCGGCCGGCGTGCTGGCCGGCGCGGGCGCGAGTG CGATCGGCTGGCTGCTCGCGCACTTCGTGTTCAAGATGGCCTACGTGCCGGGGGCGGCGCCGGTGCTGCTGGCGGCGGCG CTTGGCGCGGCCGGGGTGGTGGCCGGTGGCTGGCTGGGCACGCGCGGCCTGCTGCGGCGGCCGCCGCTTGCCAGTTTGCG GGCGTTGGCCTGA
Upstream 100 bases:
>100_bases CAACCCGCATTACGACTTCAACGACGACATCTTGCCGGCGGGCATCGGCTACTGGGTGGAGCTGGTGCGGCGTCTGCTGC CGGCGCGCTGAGGACCCTTC
Downstream 100 bases:
>100_bases GCGTCAGCTGAGCCCTCAGCCGCCGATGTAGGACATCTCGATCTTGTGCGCCTTGGCCGTGGCGGCAGTGCGGATTTCGG AATAGTGGTCGTCGCGTTGC
Product: putative inner membrane transport permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MNTLRLAFRMMLRDLRAGELHLLGLAIVVAVASLTSVGFLADRVGRGLDREANQLLGGDLLLRADRPWSEEFADEARRRG LEAVVTVQFTSMASTPDATQLAGVKVVQPGYPLRGALRIAPAPNTPDAVAGRVPERGEAWLDERLFAELGLKVGDTVELG RVAFRVGAMVSFESDRGSNFFSLLPRAMFNAADLEATGLLGVGSRATWLLQLAGPQAAVDAYAEWARPRLGRGQRIETIE NARPEVRDMLDRAQRFLRLSALLAVILAAVAVGLSARRFMRRHLDACAVMRCLGARQRQVLGVMAGEFLVFGLIAALCGS ALGWLTQWALAGGVSELVASELPQPSLLPLAHGLVVGIALLVGFVLPQLLRLGRVSTLRVLRREFDVVEAASSAAWGFGG VALLGLVFWIAGDLRLGAFAAAGFVAALGVFALAAWWGLRAVTRLKGGAGVRGGWRYGLAALGRRMGGSVIQVTALGLGM TALLLLTLIRGDLLDNWQRMAPPDAPNRFIINIQPDQREGIAARFVEAGLPAPDIQPMIRARLTAINDAPVKASDFQDER TRRLAEREFNLSYDSRLPSGNRVSAGRWHGDAAQPQLSVEAGLAETFGLKVGDRVRFEIAERSVEAPITSVRALSWDSMR VNFFFIASPGWLEDYPASLITSFHLPPERAAFSTALVNAFPNLSVIDVTAVLAQVHTMVDKLVLIVQFVFGFAVLAGLVV LFAALQSTHDEREFELAVLRTLGARNRQVRQALLAEFLVLGGAAGVLAGAGASAIGWLLAHFVFKMAYVPGAAPVLLAAA LGAAGVVAGGWLGTRGLLRRPPLASLRALA
Sequences:
>Translated_830_residues MNTLRLAFRMMLRDLRAGELHLLGLAIVVAVASLTSVGFLADRVGRGLDREANQLLGGDLLLRADRPWSEEFADEARRRG LEAVVTVQFTSMASTPDATQLAGVKVVQPGYPLRGALRIAPAPNTPDAVAGRVPERGEAWLDERLFAELGLKVGDTVELG RVAFRVGAMVSFESDRGSNFFSLLPRAMFNAADLEATGLLGVGSRATWLLQLAGPQAAVDAYAEWARPRLGRGQRIETIE NARPEVRDMLDRAQRFLRLSALLAVILAAVAVGLSARRFMRRHLDACAVMRCLGARQRQVLGVMAGEFLVFGLIAALCGS ALGWLTQWALAGGVSELVASELPQPSLLPLAHGLVVGIALLVGFVLPQLLRLGRVSTLRVLRREFDVVEAASSAAWGFGG VALLGLVFWIAGDLRLGAFAAAGFVAALGVFALAAWWGLRAVTRLKGGAGVRGGWRYGLAALGRRMGGSVIQVTALGLGM TALLLLTLIRGDLLDNWQRMAPPDAPNRFIINIQPDQREGIAARFVEAGLPAPDIQPMIRARLTAINDAPVKASDFQDER TRRLAEREFNLSYDSRLPSGNRVSAGRWHGDAAQPQLSVEAGLAETFGLKVGDRVRFEIAERSVEAPITSVRALSWDSMR VNFFFIASPGWLEDYPASLITSFHLPPERAAFSTALVNAFPNLSVIDVTAVLAQVHTMVDKLVLIVQFVFGFAVLAGLVV LFAALQSTHDEREFELAVLRTLGARNRQVRQALLAEFLVLGGAAGVLAGAGASAIGWLLAHFVFKMAYVPGAAPVLLAAA LGAAGVVAGGWLGTRGLLRRPPLASLRALA >Mature_830_residues MNTLRLAFRMMLRDLRAGELHLLGLAIVVAVASLTSVGFLADRVGRGLDREANQLLGGDLLLRADRPWSEEFADEARRRG LEAVVTVQFTSMASTPDATQLAGVKVVQPGYPLRGALRIAPAPNTPDAVAGRVPERGEAWLDERLFAELGLKVGDTVELG RVAFRVGAMVSFESDRGSNFFSLLPRAMFNAADLEATGLLGVGSRATWLLQLAGPQAAVDAYAEWARPRLGRGQRIETIE NARPEVRDMLDRAQRFLRLSALLAVILAAVAVGLSARRFMRRHLDACAVMRCLGARQRQVLGVMAGEFLVFGLIAALCGS ALGWLTQWALAGGVSELVASELPQPSLLPLAHGLVVGIALLVGFVLPQLLRLGRVSTLRVLRREFDVVEAASSAAWGFGG VALLGLVFWIAGDLRLGAFAAAGFVAALGVFALAAWWGLRAVTRLKGGAGVRGGWRYGLAALGRRMGGSVIQVTALGLGM TALLLLTLIRGDLLDNWQRMAPPDAPNRFIINIQPDQREGIAARFVEAGLPAPDIQPMIRARLTAINDAPVKASDFQDER TRRLAEREFNLSYDSRLPSGNRVSAGRWHGDAAQPQLSVEAGLAETFGLKVGDRVRFEIAERSVEAPITSVRALSWDSMR VNFFFIASPGWLEDYPASLITSFHLPPERAAFSTALVNAFPNLSVIDVTAVLAQVHTMVDKLVLIVQFVFGFAVLAGLVV LFAALQSTHDEREFELAVLRTLGARNRQVRQALLAEFLVLGGAAGVLAGAGASAIGWLLAHFVFKMAYVPGAAPVLLAAA LGAAGVVAGGWLGTRGLLRRPPLASLRALA
Specific function: Unknown
COG id: COG3127
COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1786704, Length=817, Percent_Identity=32.9253365973072, Blast_Score=331, Evalue=1e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 88870; Mature: 88870
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLRLAFRMMLRDLRAGELHLLGLAIVVAVASLTSVGFLADRVGRGLDREANQLLGGDL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCE LLRADRPWSEEFADEARRRGLEAVVTVQFTSMASTPDATQLAGVKVVQPGYPLRGALRIA EEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHCCEEEECCCCCCCCEEEEC PAPNTPDAVAGRVPERGEAWLDERLFAELGLKVGDTVELGRVAFRVGAMVSFESDRGSNF CCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCCHH FSLLPRAMFNAADLEATGLLGVGSRATWLLQLAGPQAAVDAYAEWARPRLGRGQRIETIE HHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHH NARPEVRDMLDRAQRFLRLSALLAVILAAVAVGLSARRFMRRHLDACAVMRCLGARQRQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LGVMAGEFLVFGLIAALCGSALGWLTQWALAGGVSELVASELPQPSLLPLAHGLVVGIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH LVGFVLPQLLRLGRVSTLRVLRREFDVVEAASSAAWGFGGVALLGLVFWIAGDLRLGAFA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH AAGFVAALGVFALAAWWGLRAVTRLKGGAGVRGGWRYGLAALGRRMGGSVIQVTALGLGM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHH TALLLLTLIRGDLLDNWQRMAPPDAPNRFIINIQPDQREGIAARFVEAGLPAPDIQPMIR HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHH ARLTAINDAPVKASDFQDERTRRLAEREFNLSYDSRLPSGNRVSAGRWHGDAAQPQLSVE HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHH AGLAETFGLKVGDRVRFEIAERSVEAPITSVRALSWDSMRVNFFFIASPGWLEDYPASLI HCHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHH TSFHLPPERAAFSTALVNAFPNLSVIDVTAVLAQVHTMVDKLVLIVQFVFGFAVLAGLVV HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFAALQSTHDEREFELAVLRTLGARNRQVRQALLAEFLVLGGAAGVLAGAGASAIGWLLA HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH HFVFKMAYVPGAAPVLLAAALGAAGVVAGGWLGTRGLLRRPPLASLRALA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MNTLRLAFRMMLRDLRAGELHLLGLAIVVAVASLTSVGFLADRVGRGLDREANQLLGGDL CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCE LLRADRPWSEEFADEARRRGLEAVVTVQFTSMASTPDATQLAGVKVVQPGYPLRGALRIA EEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHCCEEEECCCCCCCCEEEEC PAPNTPDAVAGRVPERGEAWLDERLFAELGLKVGDTVELGRVAFRVGAMVSFESDRGSNF CCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCCCHH FSLLPRAMFNAADLEATGLLGVGSRATWLLQLAGPQAAVDAYAEWARPRLGRGQRIETIE HHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHH NARPEVRDMLDRAQRFLRLSALLAVILAAVAVGLSARRFMRRHLDACAVMRCLGARQRQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LGVMAGEFLVFGLIAALCGSALGWLTQWALAGGVSELVASELPQPSLLPLAHGLVVGIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH LVGFVLPQLLRLGRVSTLRVLRREFDVVEAASSAAWGFGGVALLGLVFWIAGDLRLGAFA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH AAGFVAALGVFALAAWWGLRAVTRLKGGAGVRGGWRYGLAALGRRMGGSVIQVTALGLGM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHH TALLLLTLIRGDLLDNWQRMAPPDAPNRFIINIQPDQREGIAARFVEAGLPAPDIQPMIR HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHH ARLTAINDAPVKASDFQDERTRRLAEREFNLSYDSRLPSGNRVSAGRWHGDAAQPQLSVE HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHH AGLAETFGLKVGDRVRFEIAERSVEAPITSVRALSWDSMRVNFFFIASPGWLEDYPASLI HCHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHH TSFHLPPERAAFSTALVNAFPNLSVIDVTAVLAQVHTMVDKLVLIVQFVFGFAVLAGLVV HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFAALQSTHDEREFELAVLRTLGARNRQVRQALLAEFLVLGGAAGVLAGAGASAIGWLLA HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH HFVFKMAYVPGAAPVLLAAALGAAGVVAGGWLGTRGLLRRPPLASLRALA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]