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The map label for this gene is sdhD [H]

Identifier: 119897841

GI number: 119897841

Start: 1698666

End: 1699010

Strand: Direct

Name: sdhD [H]

Synonym: azo1550

Alternate gene names: 119897841

Gene position: 1698666-1699010 (Clockwise)

Preceding gene: 119897840

Following gene: 119897842

Centisome position: 38.82

GC content: 60.0

Gene sequence:

>345_bases
GTGAATCGCAAAATCGTCGGTGCCCATTACGGGCTGAAGGACTGGATCGCGCAGCGCGCGACCGCGGTGTTCATGGCGAT
CTACACGGTCGTGTTCGCAATCTGTGCGCTGACCCTGCCGGAGCTGTCCTATTCGGCCTGGTCGGGCCTGTTTTCCAACG
GGTTGATGAAATTCGCTTCCTTCCTGTTCTTCCTGTCGGTGTTCTACCACGCCTGGATCGGCGTGCGTGACATCTGGATG
GATTACGTCAAGCCGGACGGCCTGCGCCTGTCCCTGCACCTGATTACCCTCTTTCTGCTCGTCGGCTACGCCGGCTGGGC
TGCCCAGATCCTGTGGAGGCTGTAA

Upstream 100 bases:

>100_bases
ACCTGCACAAGGGTCTCGAACTGCAGGCCGCGCGCAATTCGTCGCGCATCGTTCTGGTTGTGAGCATCGCGCTCACCGTG
ATCATCGGGGTGAAGCTGTG

Downstream 100 bases:

>100_bases
GCGTGAACGTCGCAAAGCGTACCTTTGATGCGGTCATCGTCGGCGCCGGTGGTGCCGGCCTGCGTGCGGCCCTGCAACTC
TCCGAAGCCGGCCTCAAGAC

Product: succinate dehydrogenase, hydrophobic membrane anchor subunit

Products: fumarate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNRKIVGAHYGLKDWIAQRATAVFMAIYTVVFAICALTLPELSYSAWSGLFSNGLMKFASFLFFLSVFYHAWIGVRDIWM
DYVKPDGLRLSLHLITLFLLVGYAGWAAQILWRL

Sequences:

>Translated_114_residues
MNRKIVGAHYGLKDWIAQRATAVFMAIYTVVFAICALTLPELSYSAWSGLFSNGLMKFASFLFFLSVFYHAWIGVRDIWM
DYVKPDGLRLSLHLITLFLLVGYAGWAAQILWRL
>Mature_114_residues
MNRKIVGAHYGLKDWIAQRATAVFMAIYTVVFAICALTLPELSYSAWSGLFSNGLMKFASFLFFLSVFYHAWIGVRDIWM
DYVKPDGLRLSLHLITLFLLVGYAGWAAQILWRL

Specific function: Membrane-anchoring subunit of succinate dehydrogenase (SDH) [H]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786941, Length=83, Percent_Identity=38.5542168674699, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014312
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: 1.3.99.1

Molecular weight: Translated: 13057; Mature: 13057

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKIVGAHYGLKDWIAQRATAVFMAIYTVVFAICALTLPELSYSAWSGLFSNGLMKFAS
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFFLSVFYHAWIGVRDIWMDYVKPDGLRLSLHLITLFLLVGYAGWAAQILWRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRKIVGAHYGLKDWIAQRATAVFMAIYTVVFAICALTLPELSYSAWSGLFSNGLMKFAS
CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFFLSVFYHAWIGVRDIWMDYVKPDGLRLSLHLITLFLLVGYAGWAAQILWRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7698664; 12704232 [H]