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The map label for this gene is recJ [H]

Identifier: 119897796

GI number: 119897796

Start: 1646272

End: 1647963

Strand: Reverse

Name: recJ [H]

Synonym: azo1505

Alternate gene names: 119897796

Gene position: 1647963-1646272 (Counterclockwise)

Preceding gene: 119897797

Following gene: 119897795

Centisome position: 37.66

GC content: 70.45

Gene sequence:

>1692_bases
ATGATCCAGATCCACCCCCGTGCCGTCCCGCAGCGCGCCGCCGCCGCCCTGATGGACGCCGGCATCCACCCGCTGCTGGC
CCGCCTCTATGCCGCGCGTGGCATCGCCCGCAGCAGCGACCTCGACACCTCGCTGAAGGCGCTGTTGCCGCCGCAGGCGC
TCACCGGCACCGCCGAGGCGGCGCAACTGCTGGCCGACGCGATCGAAGCCGGCGCGCGCATGGTGATCGTCGCTGATTAC
GACTGCGACGGCGCCACCGCCTGCGCCGTCGGTGTGCGCGCGCTGCGCGCCTTCGGCGCCGACGTGCATTACCTGGTGCC
GGACCGCGTCACCCTGGGCTACGGCCTCACCCCGGCGATGGTGGAGATCGCCGCGCGGCTGGAGCCGGACGTGCTGATCA
CGGTGGACAACGGCATCGCCAGCGTCGAAGGCATCGCCGCCGCGCGCGCCCACGGCATGGCGACGATCATCACCGACCAC
CACCTGCCGGGCGACGTGCTGCCCGACGCCGACGTGATCGTGAACCCCAACCAGCCCGGCTGCGACTTCCCGAGCAAGGC
GCTGGCCGGCGTCGGCGCGATGTTCTACACCATGCTCGCGCTGCGCGCGGAGCTGCGCGAACGCGGTGCCTTCGCCGGCG
GCCAGGAACCCAACCTCGCCGACCTGCTCGACCTGGTGGCGCTCGGCACCGTGGCCGACGTGGTGAAGCTCGACCACAAC
AACCGCATCCTGGTCGCCCAGGGCCTGCAGCGCATGCGCGCCGGCCGCATGCAGCCGGGCATCCGCGCGCTGTTCGCCGC
CGCCGGCCGTGAGCCGGCGCGCGCCAACACCTTCGACCTCGGCTTTGCCGTCGGCCCGCGCCTGAATGCCGCCGGCCGCC
TGTCGGACATGAGCCTGGGCATCGAATGCCTGATCACCGACGATCCCGGCCGCGCGCTCAACATCGCGCAGGAACTCGAC
AAGCTCAACCGTGAGCGCCGCAGCATCGAGGCCGGCATGCAGGAAGAAGCCGCGCTGCGGCTGGAAGGTTTCGATCCCGG
CGCCAGCGCCAGCATCGCGCTGTTCGAGCCCGACTGGCACCAGGGCGTGATCGGCATCGTCGCCGGCCGCATCAAGGAAA
AGCTGCACCGCCCGACCATCGCCTTCGCGCGCGGCAATGACGGCGAACTCAAGGGCTCCGGCCGTTCGATCGCCGGCCTG
CACCTGCGCGACGCGCTCGACCTCGTCACCAAGCAGCATCCCGACCTCATCGTGCGCTTCGGCGGCCACGCGATGGCGGC
CGGCCTCACCATCCGCGAGGCGGATTTCGACCGTTTCAGCAGCGTGTTCGAGGAAGTGGTGGCCGGGCTGGTCGAACCGG
CCGCGCTGCAACGGCGCATCGAAACCGACGGCGCGCTGGAGGCCGGCTATCTCAGCCTGGAATCCGCCCGCCTGCTGGAA
AAGGAGATCTGGGGCCAGGGCTTTCCGGCCCCGGTGTTCGACGACGTCTTCCGCGTCGAACGCCAGCGCATCCTCAAGGA
CCGCCACCTCAAGCTCGAACTCGGCAAGCAGGGGGCGCGCTACGACGCCATCCAGTTCAACTTCGCCGACGGCGCGCCGG
ACACCATCCGCGCCGCCTACCGGCTGTCCATCAACGAATACAACGGCGTCAGCAACGTGCAGCTAATGCTGGAGCACTTC
GAAGCGGCCTGA

Upstream 100 bases:

>100_bases
GCAAGCCGCAAGCGCTCGACGCCCTGCTCAAGCAGATCGTGCCGCCGCCCCAACGGCCGGAAGCGCCCCCCGGCGCAATG
CACACCGAACACGGACACCC

Downstream 100 bases:

>100_bases
GCGCCCGGCCGGCGTCACGGGCAAATTGCCCGCCGCGCCGCCGCCCGCTTCCATTCGGAATGCGGCGGCGGGAAGATGGC
GGCCCCGTGCTGCCTTTCCG

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MIQIHPRAVPQRAAAALMDAGIHPLLARLYAARGIARSSDLDTSLKALLPPQALTGTAEAAQLLADAIEAGARMVIVADY
DCDGATACAVGVRALRAFGADVHYLVPDRVTLGYGLTPAMVEIAARLEPDVLITVDNGIASVEGIAAARAHGMATIITDH
HLPGDVLPDADVIVNPNQPGCDFPSKALAGVGAMFYTMLALRAELRERGAFAGGQEPNLADLLDLVALGTVADVVKLDHN
NRILVAQGLQRMRAGRMQPGIRALFAAAGREPARANTFDLGFAVGPRLNAAGRLSDMSLGIECLITDDPGRALNIAQELD
KLNRERRSIEAGMQEEAALRLEGFDPGASASIALFEPDWHQGVIGIVAGRIKEKLHRPTIAFARGNDGELKGSGRSIAGL
HLRDALDLVTKQHPDLIVRFGGHAMAAGLTIREADFDRFSSVFEEVVAGLVEPAALQRRIETDGALEAGYLSLESARLLE
KEIWGQGFPAPVFDDVFRVERQRILKDRHLKLELGKQGARYDAIQFNFADGAPDTIRAAYRLSINEYNGVSNVQLMLEHF
EAA

Sequences:

>Translated_563_residues
MIQIHPRAVPQRAAAALMDAGIHPLLARLYAARGIARSSDLDTSLKALLPPQALTGTAEAAQLLADAIEAGARMVIVADY
DCDGATACAVGVRALRAFGADVHYLVPDRVTLGYGLTPAMVEIAARLEPDVLITVDNGIASVEGIAAARAHGMATIITDH
HLPGDVLPDADVIVNPNQPGCDFPSKALAGVGAMFYTMLALRAELRERGAFAGGQEPNLADLLDLVALGTVADVVKLDHN
NRILVAQGLQRMRAGRMQPGIRALFAAAGREPARANTFDLGFAVGPRLNAAGRLSDMSLGIECLITDDPGRALNIAQELD
KLNRERRSIEAGMQEEAALRLEGFDPGASASIALFEPDWHQGVIGIVAGRIKEKLHRPTIAFARGNDGELKGSGRSIAGL
HLRDALDLVTKQHPDLIVRFGGHAMAAGLTIREADFDRFSSVFEEVVAGLVEPAALQRRIETDGALEAGYLSLESARLLE
KEIWGQGFPAPVFDDVFRVERQRILKDRHLKLELGKQGARYDAIQFNFADGAPDTIRAAYRLSINEYNGVSNVQLMLEHF
EAA
>Mature_563_residues
MIQIHPRAVPQRAAAALMDAGIHPLLARLYAARGIARSSDLDTSLKALLPPQALTGTAEAAQLLADAIEAGARMVIVADY
DCDGATACAVGVRALRAFGADVHYLVPDRVTLGYGLTPAMVEIAARLEPDVLITVDNGIASVEGIAAARAHGMATIITDH
HLPGDVLPDADVIVNPNQPGCDFPSKALAGVGAMFYTMLALRAELRERGAFAGGQEPNLADLLDLVALGTVADVVKLDHN
NRILVAQGLQRMRAGRMQPGIRALFAAAGREPARANTFDLGFAVGPRLNAAGRLSDMSLGIECLITDDPGRALNIAQELD
KLNRERRSIEAGMQEEAALRLEGFDPGASASIALFEPDWHQGVIGIVAGRIKEKLHRPTIAFARGNDGELKGSGRSIAGL
HLRDALDLVTKQHPDLIVRFGGHAMAAGLTIREADFDRFSSVFEEVVAGLVEPAALQRRIETDGALEAGYLSLESARLLE
KEIWGQGFPAPVFDDVFRVERQRILKDRHLKLELGKQGARYDAIQFNFADGAPDTIRAAYRLSINEYNGVSNVQLMLEHF
EAA

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=576, Percent_Identity=47.5694444444444, Blast_Score=511, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.11.6

Molecular weight: Translated: 60339; Mature: 60339

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIHPRAVPQRAAAALMDAGIHPLLARLYAARGIARSSDLDTSLKALLPPQALTGTAEA
CEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHCCHHHH
AQLLADAIEAGARMVIVADYDCDGATACAVGVRALRAFGADVHYLVPDRVTLGYGLTPAM
HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHH
VEIAARLEPDVLITVDNGIASVEGIAAARAHGMATIITDHHLPGDVLPDADVIVNPNQPG
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCCCCC
CDFPSKALAGVGAMFYTMLALRAELRERGAFAGGQEPNLADLLDLVALGTVADVVKLDHN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVAQGLQRMRAGRMQPGIRALFAAAGREPARANTFDLGFAVGPRLNAAGRLSDMSLG
CEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCEECCCCCCCCCCCCCCCCC
IECLITDDPGRALNIAQELDKLNRERRSIEAGMQEEAALRLEGFDPGASASIALFEPDWH
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEECCCHH
QGVIGIVAGRIKEKLHRPTIAFARGNDGELKGSGRSIAGLHLRDALDLVTKQHPDLIVRF
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEE
GGHAMAAGLTIREADFDRFSSVFEEVVAGLVEPAALQRRIETDGALEAGYLSLESARLLE
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEHHHHHHHH
KEIWGQGFPAPVFDDVFRVERQRILKDRHLKLELGKQGARYDAIQFNFADGAPDTIRAAY
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHH
RLSINEYNGVSNVQLMLEHFEAA
EEEEHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIQIHPRAVPQRAAAALMDAGIHPLLARLYAARGIARSSDLDTSLKALLPPQALTGTAEA
CEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHCCHHHH
AQLLADAIEAGARMVIVADYDCDGATACAVGVRALRAFGADVHYLVPDRVTLGYGLTPAM
HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCHHH
VEIAARLEPDVLITVDNGIASVEGIAAARAHGMATIITDHHLPGDVLPDADVIVNPNQPG
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCCCCC
CDFPSKALAGVGAMFYTMLALRAELRERGAFAGGQEPNLADLLDLVALGTVADVVKLDHN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVAQGLQRMRAGRMQPGIRALFAAAGREPARANTFDLGFAVGPRLNAAGRLSDMSLG
CEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEECCEECCCCCCCCCCCCCCCCC
IECLITDDPGRALNIAQELDKLNRERRSIEAGMQEEAALRLEGFDPGASASIALFEPDWH
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEECCCHH
QGVIGIVAGRIKEKLHRPTIAFARGNDGELKGSGRSIAGLHLRDALDLVTKQHPDLIVRF
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCEEEEE
GGHAMAAGLTIREADFDRFSSVFEEVVAGLVEPAALQRRIETDGALEAGYLSLESARLLE
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEHHHHHHHH
KEIWGQGFPAPVFDDVFRVERQRILKDRHLKLELGKQGARYDAIQFNFADGAPDTIRAAY
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHH
RLSINEYNGVSNVQLMLEHFEAA
EEEEHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]