| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is gltX
Identifier: 119897770
GI number: 119897770
Start: 1612279
End: 1613682
Strand: Direct
Name: gltX
Synonym: azo1479
Alternate gene names: 119897770
Gene position: 1612279-1613682 (Clockwise)
Preceding gene: 119897766
Following gene: 119897776
Centisome position: 36.84
GC content: 68.09
Gene sequence:
>1404_bases ATGGCCGCCACCCCAGTCCGTACCCGTTTCGCGCCCAGCCCCACCGGCTACCTCCACATCGGCGGTGCCCGCACGGCGCT GTTCTCCTGGGCCTATGCCCGCCGCCACGGCGGCCGCTTCATCCTGCGCATTGAGGACACCGACGTGGCCCGCTCCACCC CGGAAGCGGTGCAGGCCATCCTGGATGGCATGAAGTGGCTCGGCCTGGAGCATGACGAGGGCCCGTTCTACCAGATGCAG CGCATGGATCGCTACAAGGAAGTGATCCAGCAGATGCTCGCCGCCGGCACCGCCTACTACTGCTACACCTCGAAGGAAGA ACTCGACGCGCTGCGCGCCGAGCAGGAAGCGAAGAAGGAGAAGCCGCGCTACGACGGCCGCTGGCGCCCCGCGCCCGGCA AGACGCTGCCCACGCCGCCGGCCGGCGTGCAGCCGGTGGTGCGCTTCTGCAACCCGACCACCGGCGTGGTGGCCTGGGAC GACCTGGTGAAGGGCCGCATCGAGATCTCCAACACCGAACTCGACGACTTCATCATCGCGCGCGCCGACGGCACGCCCAC CTACAACTTTTGCGTCGTCGTCGATGACTGGGACATGGGCATCACCCAGGTCATCCGCGGCGACGACCATGTGAACAACA CCCCGCGCCAGATCAACGTGCTGCAGGCGCTTGGCGCCAGCGTGCCGCAGTACGCGCACCTGTCGATGATCCTGGGCGAC GACGGCACCAAGCTCTCCAAGCGCCACGGCGCGGTGAGCGTGATGCAGTACGACGACGAAGGCTATCTGCCGGAGGCCGT CATCAACTACCTCGCGCGCCTGGGCTGGAGCCACGGCGACGACGAGATCTTCAGCCGTGAGCAGTTCGTCGAGTGGTTCG ACCTCGACCACATCACGCCGTCGGCGGCGCAGTTCAACACCGAAAAGCTCAACTGGCTGAACGCCCACTACATCAAGCAG GCCGACAACGCCTACCTGGCGGCCGAAGTCGCCAACCGGCTTGCCCGCCGCGGGGTCGATCCGGAAGCCGGCCCGGCGCT GGAGCAGGTGGTGGCGCTGTACAAGGACCGCTCCGCCAACCTCAACGAACTCGCCGACGCGGCCGAATTGTTCTGCGTGG ATGTCCATGCCGCGCCGGAAGTGATCGCCCAGCACCTCACCGACACCGCCAGGGCGGCGCTCGCCAGCTTGCGCGCCCGC TTCGAGGCGGTGGCGTGGGACAAGGCCGCGCTCAACCAGGCGATCAAGGACACCATGGCCGAGCACGGCCTGAAGATGCC GCAGGTGGCGATTCCGCTGCGGGTGGCGCTGCTCGGCGTGCCGCAGACGCCTTCGATCGACGCGGTGGTGGAGGTGCTCG GCCGCGAGCGTGTGCTGGCGCGGCTGGCGCGACACCTCGGCTGA
Upstream 100 bases:
>100_bases ATGTACATGGCTGTTCCCTGCGCGGCGCCTGCTGCGCCGCAATGTCGCGACGATCGCTTAGAATTCCGCCTTTCGTCCTG TCCGCATTCCGAGTCCCACG
Downstream 100 bases:
>100_bases GGTCCGGCCTTCGCGCTGGTCGCAACGCGGCGCCCGCTCCCGCCAGGGAGGGGCGCCGCGGCGTTTTCAGCGGACGAACT TTTCCGGGCGCAGCACGCCC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MAATPVRTRFAPSPTGYLHIGGARTALFSWAYARRHGGRFILRIEDTDVARSTPEAVQAILDGMKWLGLEHDEGPFYQMQ RMDRYKEVIQQMLAAGTAYYCYTSKEELDALRAEQEAKKEKPRYDGRWRPAPGKTLPTPPAGVQPVVRFCNPTTGVVAWD DLVKGRIEISNTELDDFIIARADGTPTYNFCVVVDDWDMGITQVIRGDDHVNNTPRQINVLQALGASVPQYAHLSMILGD DGTKLSKRHGAVSVMQYDDEGYLPEAVINYLARLGWSHGDDEIFSREQFVEWFDLDHITPSAAQFNTEKLNWLNAHYIKQ ADNAYLAAEVANRLARRGVDPEAGPALEQVVALYKDRSANLNELADAAELFCVDVHAAPEVIAQHLTDTARAALASLRAR FEAVAWDKAALNQAIKDTMAEHGLKMPQVAIPLRVALLGVPQTPSIDAVVEVLGRERVLARLARHLG
Sequences:
>Translated_467_residues MAATPVRTRFAPSPTGYLHIGGARTALFSWAYARRHGGRFILRIEDTDVARSTPEAVQAILDGMKWLGLEHDEGPFYQMQ RMDRYKEVIQQMLAAGTAYYCYTSKEELDALRAEQEAKKEKPRYDGRWRPAPGKTLPTPPAGVQPVVRFCNPTTGVVAWD DLVKGRIEISNTELDDFIIARADGTPTYNFCVVVDDWDMGITQVIRGDDHVNNTPRQINVLQALGASVPQYAHLSMILGD DGTKLSKRHGAVSVMQYDDEGYLPEAVINYLARLGWSHGDDEIFSREQFVEWFDLDHITPSAAQFNTEKLNWLNAHYIKQ ADNAYLAAEVANRLARRGVDPEAGPALEQVVALYKDRSANLNELADAAELFCVDVHAAPEVIAQHLTDTARAALASLRAR FEAVAWDKAALNQAIKDTMAEHGLKMPQVAIPLRVALLGVPQTPSIDAVVEVLGRERVLARLARHLG >Mature_466_residues AATPVRTRFAPSPTGYLHIGGARTALFSWAYARRHGGRFILRIEDTDVARSTPEAVQAILDGMKWLGLEHDEGPFYQMQR MDRYKEVIQQMLAAGTAYYCYTSKEELDALRAEQEAKKEKPRYDGRWRPAPGKTLPTPPAGVQPVVRFCNPTTGVVAWDD LVKGRIEISNTELDDFIIARADGTPTYNFCVVVDDWDMGITQVIRGDDHVNNTPRQINVLQALGASVPQYAHLSMILGDD GTKLSKRHGAVSVMQYDDEGYLPEAVINYLARLGWSHGDDEIFSREQFVEWFDLDHITPSAAQFNTEKLNWLNAHYIKQA DNAYLAAEVANRLARRGVDPEAGPALEQVVALYKDRSANLNELADAAELFCVDVHAAPEVIAQHLTDTARAALASLRARF EAVAWDKAALNQAIKDTMAEHGLKMPQVAIPLRVALLGVPQTPSIDAVVEVLGRERVLARLARHLG
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=492, Percent_Identity=31.0975609756098, Blast_Score=223, Evalue=4e-58, Organism=Escherichia coli, GI1788743, Length=463, Percent_Identity=55.0755939524838, Blast_Score=523, Evalue=1e-149, Organism=Escherichia coli, GI226510925, Length=292, Percent_Identity=34.5890410958904, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1786895, Length=110, Percent_Identity=30, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71993394, Length=467, Percent_Identity=29.3361884368308, Blast_Score=199, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6324540, Length=490, Percent_Identity=30.2040816326531, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6324742, Length=114, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6321192, Length=232, Percent_Identity=27.1551724137931, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24665321, Length=499, Percent_Identity=31.8637274549098, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI17864488, Length=120, Percent_Identity=30.8333333333333, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_AZOSB (A1K5J1)
Other databases:
- EMBL: AM406670 - RefSeq: YP_932983.1 - ProteinModelPortal: A1K5J1 - SMR: A1K5J1 - STRING: A1K5J1 - GeneID: 4606868 - GenomeReviews: AM406670_GR - KEGG: azo:azo1479 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: MAHIPLI - PhylomeDB: A1K5J1 - ProtClustDB: PRK01406 - BioCyc: ASP62928:AZO1479-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 51866; Mature: 51735
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 247-247
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATPVRTRFAPSPTGYLHIGGARTALFSWAYARRHGGRFILRIEDTDVARSTPEAVQAI CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHH LDGMKWLGLEHDEGPFYQMQRMDRYKEVIQQMLAAGTAYYCYTSKEELDALRAEQEAKKE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHC KPRYDGRWRPAPGKTLPTPPAGVQPVVRFCNPTTGVVAWDDLVKGRIEISNTELDDFIIA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHHCCEEEECCCCCCCEEEE RADGTPTYNFCVVVDDWDMGITQVIRGDDHVNNTPRQINVLQALGASVPQYAHLSMILGD ECCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHEEEEEECC DGTKLSKRHGAVSVMQYDDEGYLPEAVINYLARLGWSHGDDEIFSREQFVEWFDLDHITP CCCHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC SAAQFNTEKLNWLNAHYIKQADNAYLAAEVANRLARRGVDPEAGPALEQVVALYKDRSAN CHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC LNELADAAELFCVDVHAAPEVIAQHLTDTARAALASLRARFEAVAWDKAALNQAIKDTMA HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHGLKMPQVAIPLRVALLGVPQTPSIDAVVEVLGRERVLARLARHLG HCCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AATPVRTRFAPSPTGYLHIGGARTALFSWAYARRHGGRFILRIEDTDVARSTPEAVQAI CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHH LDGMKWLGLEHDEGPFYQMQRMDRYKEVIQQMLAAGTAYYCYTSKEELDALRAEQEAKKE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHC KPRYDGRWRPAPGKTLPTPPAGVQPVVRFCNPTTGVVAWDDLVKGRIEISNTELDDFIIA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHHCCEEEECCCCCCCEEEE RADGTPTYNFCVVVDDWDMGITQVIRGDDHVNNTPRQINVLQALGASVPQYAHLSMILGD ECCCCCCEEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHEEEEEECC DGTKLSKRHGAVSVMQYDDEGYLPEAVINYLARLGWSHGDDEIFSREQFVEWFDLDHITP CCCHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC SAAQFNTEKLNWLNAHYIKQADNAYLAAEVANRLARRGVDPEAGPALEQVVALYKDRSAN CHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC LNELADAAELFCVDVHAAPEVIAQHLTDTARAALASLRARFEAVAWDKAALNQAIKDTMA HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHGLKMPQVAIPLRVALLGVPQTPSIDAVVEVLGRERVLARLARHLG HCCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA