| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is mmoQ [H]
Identifier: 119897735
GI number: 119897735
Start: 1572893
End: 1574863
Strand: Direct
Name: mmoQ [H]
Synonym: azo1444
Alternate gene names: 119897735
Gene position: 1572893-1574863 (Clockwise)
Preceding gene: 119897724
Following gene: 119897736
Centisome position: 35.94
GC content: 69.25
Gene sequence:
>1971_bases ATGCCGCCTCTAGACATGCACCGCTTCGAGCAGCTCAAGGCCTCGGGCGAGTTGCCCTCGCCGCGCGGGGTGGCCCTCGC CATCATCCGCCTCACCCAGGAAGAAGAGGTCTCGATCCCGGAGCTGGCGCGCATCATCAAGAGCGACCCTGCGTTCGTCG GGCGCTTGATCAAGGCGGCCAACGGCACCGTGCCGCTCAACCGGCGCGCAATCGTGTCGGTGCAGGAAGCCCTGATGGTG CTCGGCCTGCCCGCCGTGCGCACGATGGCGCTCGGGTTTTCGCTGCTGTCCAACTACCGCAAGGGCGCCTGCGCCGGATT CGACTACGGCCGTTTCTGGTCGTCCTCGCTGCTGATGGCGCTGTCGATGCAGGTGCTGGTGCAGCGGGTGCGCGTGGTGG CGGCCGACGAAGCGTTCAGCGTCGGCCTGCTCGCGCGGGTGGGCGAACTCGCGCTCGCCACGCTGTATCCGGCCGACTAC GGCCGCATCCTGCTCGAATCCCGCCGCTTTCCCGAACTGCGTTTGTTCGACCTCGAGCAGCAGGCCTTCGCGATGACCCA CCGCGAGCTGTCCGCCGCGATGCTGGTGGACTGGGGGCTGCCGCCGATCTTCACCCAGCCGGTGATGTTCTTCGAGCAGG CCGACAAGGCCACCTTCGCGGCCGAGAGCCGCGAGGCGCAGCTGATGGAGTGCCTCGGGCTGGCGCGCACGCTCGCCGAG CTGTGCCTCGCGCCGTCGGTGGAGCAGACCTCGATGATGCCCGGCGTGCTCAAGCAGGCGGCGGCGCTCGGGCTGAACAA GGAAGACTTCGCCGCGGCCTGCGAGCGCATCGGCCGCGAGTGGATGGAGTGGGGCAAGCTGCTGCAGCTCGAAACGCTCG CGCCGCCGCAGTTCTCCGACCTGATCGAACGCAGCGGCGGCACCGGCCAGCCGGTTCCCGCGGCTTGCGCCGGGGCGGAC GGCGGCGCCGAGGCTGCGGAAACCGGCGCGCGCGACGGCGGCATGCGAGTGCTGGTGGTCGATGACGAAGCCTCGATCCG CAAGCTGATGTGCGCGGTGCTGGAGGAGGCCGGCCACACGGTGTTCGAGGCCGAGAACGGCCGCATCGGGCTGGAGCGCG CGCTCGACATCCAGCCGCACATGATGGTGCTCGACTGGGTGATGCCCGAGATGGAGGGGCTGGAACTGGTGCGCGCGCTG CGCGCCACCAAGATCGGACGCAGCATCTACATCCTGTTGCTGACCAATGTGGAAGACGATGAGCGCCTGATCGAGGCCTT CGAGGTCGGCGCGGACGATTTCGTCACCAAGCCGGTCAAGCCGCGCGTGCTCGCCGCCCGCATGCGGGCCGGCCAGCGCG TGGTACGGCTGCAGCAGGAACTGGAGCGCGACCGCGAGGAAATCCGCCATTTCGCCGCCGAACTCGCGATCACCAACCGC CGCCTGCAGGAAGCGGCGCTGACCGATGCGTTGACCGGTTTTCCCAACCGCCGTTACGCGATCGACCGTATGCAGCAGGA ATGGACCGCGGCGAAGCGCAACGGCCGGCCGCTGTCGTGCATGATCATCGACCTCGACGGCTTCAAGCAGATCAACGACA CCTACGGCCACGACGTCGGCGACATGGTGCTGCGGCAATCGGCCGATGCGCTGCGGCTGGCGCTGCGCGGCCAGGACGTC ATCTGCCGTACCGGCGGCGACGAGTTCCTGGTCATCTGCCCCGACACCGACCTGGCACAAGGGTTGAGCTGCGCCGAGCG CCTGCGCGCCGCGGTCGATGCGCTCGCGATCGTCACCGGCGCCGACACCCTGGGGCTGACGATCAGCATCGGCGTCGCCG TGCGCGACGACAGCATGGCCGACCTCGACGCGCTGATGAAGCGCGCCGACCAGGGCGCTTACCTGGCCAAGCAGCGCGGC CGCAATTGCGTCGCCTCGGTGCAGGGCGGCGCCGCGGGAGCCCAGCGATGA
Upstream 100 bases:
>100_bases ATGGCTGACAGCGTGGGCGAAGCCACGTAAAGTTCCACGGCGCGGCGCGCCATCCCCGAATGCGCACCGTCGCCGTATCC GAGATCGTCAGAAGGACACC
Downstream 100 bases:
>100_bases GCGCCGCGGTGGAGCACCGCGTGCTGGGGCGGCCGGCGGGGCCGGTGCGGTTGCTGATCGTCGACGATTCCGAGGACGAC GCCTTTCTCGTCTGTGCGGA
Product: response regulator
Products: NA
Alternate protein names: Stalked cell differentiation-controlling protein; Diguanylate cyclase; DGC; Diguanylate kinase [H]
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MPPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAANGTVPLNRRAIVSVQEALMV LGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMALSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADY GRILLESRRFPELRLFDLEQQAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSDLIERSGGTGQPVPAACAGAD GGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHTVFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRAL RATKIGRSIYILLLTNVEDDERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVGDMVLRQSADALRLALRGQDV ICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTGADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRG RNCVASVQGGAAGAQR
Sequences:
>Translated_656_residues MPPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAANGTVPLNRRAIVSVQEALMV LGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMALSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADY GRILLESRRFPELRLFDLEQQAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSDLIERSGGTGQPVPAACAGAD GGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHTVFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRAL RATKIGRSIYILLLTNVEDDERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVGDMVLRQSADALRLALRGQDV ICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTGADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRG RNCVASVQGGAAGAQR >Mature_655_residues PPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAANGTVPLNRRAIVSVQEALMVL GLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMALSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADYG RILLESRRFPELRLFDLEQQAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAEL CLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSDLIERSGGTGQPVPAACAGADG GAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHTVFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRALR ATKIGRSIYILLLTNVEDDERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNRR LQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVGDMVLRQSADALRLALRGQDVI CRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTGADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRGR NCVASVQGGAAGAQR
Specific function: Catalyzes the condensation of two GTP molecules to the cyclic dinucleotide di-GMP (c-di-GMP), which acts as a secondary messenger [H]
COG id: COG3706
COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain
Gene ontology:
Cell location: Cytoplasm. Note=Phosphorylated PleD localizes to the differentiating pole [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 response regulatory domains [H]
Homologues:
Organism=Escherichia coli, GI145693134, Length=158, Percent_Identity=40.5063291139241, Blast_Score=122, Evalue=7e-29, Organism=Escherichia coli, GI1786584, Length=171, Percent_Identity=38.5964912280702, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI87082007, Length=179, Percent_Identity=34.6368715083799, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787262, Length=171, Percent_Identity=34.5029239766082, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87081881, Length=179, Percent_Identity=39.1061452513966, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1787816, Length=156, Percent_Identity=35.8974358974359, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1787541, Length=166, Percent_Identity=34.3373493975904, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=36.4406779661017, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788381, Length=179, Percent_Identity=31.8435754189944, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI87081977, Length=156, Percent_Identity=32.0512820512821, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787802, Length=184, Percent_Identity=31.5217391304348, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1788085, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081974, Length=153, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787375, Length=119, Percent_Identity=36.1344537815126, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1786911, Length=117, Percent_Identity=35.042735042735, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788550, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1786784, Length=116, Percent_Identity=35.3448275862069, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=36.4406779661017, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1790860, Length=189, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790863, Length=114, Percent_Identity=31.5789473684211, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788191, Length=119, Percent_Identity=31.9327731092437, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788394, Length=129, Percent_Identity=31.0077519379845, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR000160 - InterPro: IPR001789 [H]
Pfam domain/function: PF00990 GGDEF; PF00072 Response_reg [H]
EC number: =2.7.7.65 [H]
Molecular weight: Translated: 71705; Mature: 71574
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAA CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHC NGTVPLNRRAIVSVQEALMVLGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADYGRILLESRRFPELRLFDLEQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHH QAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSD HHCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH LIERSGGTGQPVPAACAGADGGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHT HHHCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCE VFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRALRATKIGRSIYILLLTNVEDD EEECCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHH ERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCHH DMVLRQSADALRLALRGQDVICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTG HHHHHHCHHHHHHHHCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC ADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRGRNCVASVQGGAAGAQR CCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCCC >Mature Secondary Structure PPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAA CCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHC NGTVPLNRRAIVSVQEALMVLGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADYGRILLESRRFPELRLFDLEQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHH QAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSD HHCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH LIERSGGTGQPVPAACAGADGGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHT HHHCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCE VFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRALRATKIGRSIYILLLTNVEDD EEECCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHH ERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVG HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCHH DMVLRQSADALRLALRGQDVICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTG HHHHHHCHHHHHHHHCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC ADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRGRNCVASVQGGAAGAQR CCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA