Definition Azoarcus sp. BH72 chromosome, complete genome.
Accession NC_008702
Length 4,376,040

Click here to switch to the map view.

The map label for this gene is mmoQ [H]

Identifier: 119897735

GI number: 119897735

Start: 1572893

End: 1574863

Strand: Direct

Name: mmoQ [H]

Synonym: azo1444

Alternate gene names: 119897735

Gene position: 1572893-1574863 (Clockwise)

Preceding gene: 119897724

Following gene: 119897736

Centisome position: 35.94

GC content: 69.25

Gene sequence:

>1971_bases
ATGCCGCCTCTAGACATGCACCGCTTCGAGCAGCTCAAGGCCTCGGGCGAGTTGCCCTCGCCGCGCGGGGTGGCCCTCGC
CATCATCCGCCTCACCCAGGAAGAAGAGGTCTCGATCCCGGAGCTGGCGCGCATCATCAAGAGCGACCCTGCGTTCGTCG
GGCGCTTGATCAAGGCGGCCAACGGCACCGTGCCGCTCAACCGGCGCGCAATCGTGTCGGTGCAGGAAGCCCTGATGGTG
CTCGGCCTGCCCGCCGTGCGCACGATGGCGCTCGGGTTTTCGCTGCTGTCCAACTACCGCAAGGGCGCCTGCGCCGGATT
CGACTACGGCCGTTTCTGGTCGTCCTCGCTGCTGATGGCGCTGTCGATGCAGGTGCTGGTGCAGCGGGTGCGCGTGGTGG
CGGCCGACGAAGCGTTCAGCGTCGGCCTGCTCGCGCGGGTGGGCGAACTCGCGCTCGCCACGCTGTATCCGGCCGACTAC
GGCCGCATCCTGCTCGAATCCCGCCGCTTTCCCGAACTGCGTTTGTTCGACCTCGAGCAGCAGGCCTTCGCGATGACCCA
CCGCGAGCTGTCCGCCGCGATGCTGGTGGACTGGGGGCTGCCGCCGATCTTCACCCAGCCGGTGATGTTCTTCGAGCAGG
CCGACAAGGCCACCTTCGCGGCCGAGAGCCGCGAGGCGCAGCTGATGGAGTGCCTCGGGCTGGCGCGCACGCTCGCCGAG
CTGTGCCTCGCGCCGTCGGTGGAGCAGACCTCGATGATGCCCGGCGTGCTCAAGCAGGCGGCGGCGCTCGGGCTGAACAA
GGAAGACTTCGCCGCGGCCTGCGAGCGCATCGGCCGCGAGTGGATGGAGTGGGGCAAGCTGCTGCAGCTCGAAACGCTCG
CGCCGCCGCAGTTCTCCGACCTGATCGAACGCAGCGGCGGCACCGGCCAGCCGGTTCCCGCGGCTTGCGCCGGGGCGGAC
GGCGGCGCCGAGGCTGCGGAAACCGGCGCGCGCGACGGCGGCATGCGAGTGCTGGTGGTCGATGACGAAGCCTCGATCCG
CAAGCTGATGTGCGCGGTGCTGGAGGAGGCCGGCCACACGGTGTTCGAGGCCGAGAACGGCCGCATCGGGCTGGAGCGCG
CGCTCGACATCCAGCCGCACATGATGGTGCTCGACTGGGTGATGCCCGAGATGGAGGGGCTGGAACTGGTGCGCGCGCTG
CGCGCCACCAAGATCGGACGCAGCATCTACATCCTGTTGCTGACCAATGTGGAAGACGATGAGCGCCTGATCGAGGCCTT
CGAGGTCGGCGCGGACGATTTCGTCACCAAGCCGGTCAAGCCGCGCGTGCTCGCCGCCCGCATGCGGGCCGGCCAGCGCG
TGGTACGGCTGCAGCAGGAACTGGAGCGCGACCGCGAGGAAATCCGCCATTTCGCCGCCGAACTCGCGATCACCAACCGC
CGCCTGCAGGAAGCGGCGCTGACCGATGCGTTGACCGGTTTTCCCAACCGCCGTTACGCGATCGACCGTATGCAGCAGGA
ATGGACCGCGGCGAAGCGCAACGGCCGGCCGCTGTCGTGCATGATCATCGACCTCGACGGCTTCAAGCAGATCAACGACA
CCTACGGCCACGACGTCGGCGACATGGTGCTGCGGCAATCGGCCGATGCGCTGCGGCTGGCGCTGCGCGGCCAGGACGTC
ATCTGCCGTACCGGCGGCGACGAGTTCCTGGTCATCTGCCCCGACACCGACCTGGCACAAGGGTTGAGCTGCGCCGAGCG
CCTGCGCGCCGCGGTCGATGCGCTCGCGATCGTCACCGGCGCCGACACCCTGGGGCTGACGATCAGCATCGGCGTCGCCG
TGCGCGACGACAGCATGGCCGACCTCGACGCGCTGATGAAGCGCGCCGACCAGGGCGCTTACCTGGCCAAGCAGCGCGGC
CGCAATTGCGTCGCCTCGGTGCAGGGCGGCGCCGCGGGAGCCCAGCGATGA

Upstream 100 bases:

>100_bases
ATGGCTGACAGCGTGGGCGAAGCCACGTAAAGTTCCACGGCGCGGCGCGCCATCCCCGAATGCGCACCGTCGCCGTATCC
GAGATCGTCAGAAGGACACC

Downstream 100 bases:

>100_bases
GCGCCGCGGTGGAGCACCGCGTGCTGGGGCGGCCGGCGGGGCCGGTGCGGTTGCTGATCGTCGACGATTCCGAGGACGAC
GCCTTTCTCGTCTGTGCGGA

Product: response regulator

Products: NA

Alternate protein names: Stalked cell differentiation-controlling protein; Diguanylate cyclase; DGC; Diguanylate kinase [H]

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MPPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAANGTVPLNRRAIVSVQEALMV
LGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMALSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADY
GRILLESRRFPELRLFDLEQQAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE
LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSDLIERSGGTGQPVPAACAGAD
GGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHTVFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRAL
RATKIGRSIYILLLTNVEDDERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR
RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVGDMVLRQSADALRLALRGQDV
ICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTGADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRG
RNCVASVQGGAAGAQR

Sequences:

>Translated_656_residues
MPPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAANGTVPLNRRAIVSVQEALMV
LGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMALSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADY
GRILLESRRFPELRLFDLEQQAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE
LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSDLIERSGGTGQPVPAACAGAD
GGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHTVFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRAL
RATKIGRSIYILLLTNVEDDERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR
RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVGDMVLRQSADALRLALRGQDV
ICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTGADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRG
RNCVASVQGGAAGAQR
>Mature_655_residues
PPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAANGTVPLNRRAIVSVQEALMVL
GLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMALSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADYG
RILLESRRFPELRLFDLEQQAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAEL
CLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSDLIERSGGTGQPVPAACAGADG
GAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHTVFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRALR
ATKIGRSIYILLLTNVEDDERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNRR
LQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVGDMVLRQSADALRLALRGQDVI
CRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTGADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRGR
NCVASVQGGAAGAQR

Specific function: Catalyzes the condensation of two GTP molecules to the cyclic dinucleotide di-GMP (c-di-GMP), which acts as a secondary messenger [H]

COG id: COG3706

COG function: function code T; Response regulator containing a CheY-like receiver domain and a GGDEF domain

Gene ontology:

Cell location: Cytoplasm. Note=Phosphorylated PleD localizes to the differentiating pole [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 response regulatory domains [H]

Homologues:

Organism=Escherichia coli, GI145693134, Length=158, Percent_Identity=40.5063291139241, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1786584, Length=171, Percent_Identity=38.5964912280702, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI87082007, Length=179, Percent_Identity=34.6368715083799, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1787262, Length=171, Percent_Identity=34.5029239766082, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87081881, Length=179, Percent_Identity=39.1061452513966, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787816, Length=156, Percent_Identity=35.8974358974359, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787541, Length=166, Percent_Identity=34.3373493975904, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=36.4406779661017, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1788381, Length=179, Percent_Identity=31.8435754189944, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI87081977, Length=156, Percent_Identity=32.0512820512821, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787802, Length=184, Percent_Identity=31.5217391304348, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1788085, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI87081974, Length=153, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787375, Length=119, Percent_Identity=36.1344537815126, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1786911, Length=117, Percent_Identity=35.042735042735, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788550, Length=143, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786784, Length=116, Percent_Identity=35.3448275862069, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789809, Length=118, Percent_Identity=36.4406779661017, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1790860, Length=189, Percent_Identity=31.7460317460317, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790863, Length=114, Percent_Identity=31.5789473684211, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788191, Length=119, Percent_Identity=31.9327731092437, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788394, Length=129, Percent_Identity=31.0077519379845, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR011006
- InterPro:   IPR000160
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00990 GGDEF; PF00072 Response_reg [H]

EC number: =2.7.7.65 [H]

Molecular weight: Translated: 71705; Mature: 71574

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAA
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHC
NGTVPLNRRAIVSVQEALMVLGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMA
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADYGRILLESRRFPELRLFDLEQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHH
QAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSD
HHCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH
LIERSGGTGQPVPAACAGADGGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHT
HHHCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCE
VFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRALRATKIGRSIYILLLTNVEDD
EEECCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHH
ERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR
HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCHH
DMVLRQSADALRLALRGQDVICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTG
HHHHHHCHHHHHHHHCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
ADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRGRNCVASVQGGAAGAQR
CCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
PPLDMHRFEQLKASGELPSPRGVALAIIRLTQEEEVSIPELARIIKSDPAFVGRLIKAA
CCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHC
NGTVPLNRRAIVSVQEALMVLGLPAVRTMALGFSLLSNYRKGACAGFDYGRFWSSSLLMA
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
LSMQVLVQRVRVVAADEAFSVGLLARVGELALATLYPADYGRILLESRRFPELRLFDLEQ
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCHH
QAFAMTHRELSAAMLVDWGLPPIFTQPVMFFEQADKATFAAESREAQLMECLGLARTLAE
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LCLAPSVEQTSMMPGVLKQAAALGLNKEDFAAACERIGREWMEWGKLLQLETLAPPQFSD
HHCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHH
LIERSGGTGQPVPAACAGADGGAEAAETGARDGGMRVLVVDDEASIRKLMCAVLEEAGHT
HHHCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCE
VFEAENGRIGLERALDIQPHMMVLDWVMPEMEGLELVRALRATKIGRSIYILLLTNVEDD
EEECCCCCCCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHH
ERLIEAFEVGADDFVTKPVKPRVLAARMRAGQRVVRLQQELERDREEIRHFAAELAITNR
HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQEAALTDALTGFPNRRYAIDRMQQEWTAAKRNGRPLSCMIIDLDGFKQINDTYGHDVG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCHH
DMVLRQSADALRLALRGQDVICRTGGDEFLVICPDTDLAQGLSCAERLRAAVDALAIVTG
HHHHHHCHHHHHHHHCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
ADTLGLTISIGVAVRDDSMADLDALMKRADQGAYLAKQRGRNCVASVQGGAAGAQR
CCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA