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The map label for this gene is rnfA2 [H]

Identifier: 119897732

GI number: 119897732

Start: 1570739

End: 1571323

Strand: Reverse

Name: rnfA2 [H]

Synonym: azo1441

Alternate gene names: 119897732

Gene position: 1571323-1570739 (Counterclockwise)

Preceding gene: 119897733

Following gene: 119897731

Centisome position: 35.91

GC content: 65.13

Gene sequence:

>585_bases
ATGAGCAGCTATCTTTTCGTCGTCATCGGCGCCGTTCTGGTCAACAACGTCGTCTTCGTCCGCATCCTCGGGCTGTGCCC
CTTCATGGGCGTGTCGAAGAAGCTCGAAACGGCGATCGGCATGGGCGCCGCCACCACCTTCGTGCTGACCCTGGGCGCCG
GCAGCAGCTACCTGATCGACCACTACCTGCTGGTCCCGGCGGACCTCGGCTACCTGCGCACGCTGGCGTTCATCGTGGTG
ATCGCCGCCATCGTGCAGCTGACCGAACTCGTCATCCAGAAGACCAGCCCGCTGCTGCATCAGGTGCTCGGCATCTACCT
GCCGCTGATCACCACCAACTGCGCGGTGCTCGGCGTTCCGCTGCTCAACGTCGGCCTCGGCCACAACCTGCTCGAATCGC
TGCTGTTCGGGTTCGGCTCCTCGGTGGGCTTCACGTTCGCGCTGGTGCTGTTCGCCGGCATCCGCGAGCGGCTTGAAGGC
GCCGACGTGCCGCAGCCCTTCCGCGGCACCGCGATCGCGATGATCACCGCCGGCTTCATGAGCCTCGCTTTCATGGGCTT
TGCCGGCCTCGACCGTTTCCACTGA

Upstream 100 bases:

>100_bases
TGCATCCGCTGTCATAAACATCGGGGATTCTTGCGCGGACAGGGTTGTGGCGAGCGCGCACGGCGCGCGATAATCCGCCG
ATTCACCCCTGCCGCCCCCC

Downstream 100 bases:

>100_bases
GCCCCCAGATGCTGTCTGCCCTTCTCGTCATGGCCGCCATCGCGGTAGTGCTCGGCGCGGCGCTCGGCTTTGCCGCGATC
CGCTTCCGCGTCGAAGGCGA

Product: electron transport complex promplex protein RnfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSSYLFVVIGAVLVNNVVFVRILGLCPFMGVSKKLETAIGMGAATTFVLTLGAGSSYLIDHYLLVPADLGYLRTLAFIVV
IAAIVQLTELVIQKTSPLLHQVLGIYLPLITTNCAVLGVPLLNVGLGHNLLESLLFGFGSSVGFTFALVLFAGIRERLEG
ADVPQPFRGTAIAMITAGFMSLAFMGFAGLDRFH

Sequences:

>Translated_194_residues
MSSYLFVVIGAVLVNNVVFVRILGLCPFMGVSKKLETAIGMGAATTFVLTLGAGSSYLIDHYLLVPADLGYLRTLAFIVV
IAAIVQLTELVIQKTSPLLHQVLGIYLPLITTNCAVLGVPLLNVGLGHNLLESLLFGFGSSVGFTFALVLFAGIRERLEG
ADVPQPFRGTAIAMITAGFMSLAFMGFAGLDRFH
>Mature_193_residues
SSYLFVVIGAVLVNNVVFVRILGLCPFMGVSKKLETAIGMGAATTFVLTLGAGSSYLIDHYLLVPADLGYLRTLAFIVVI
AAIVQLTELVIQKTSPLLHQVLGIYLPLITTNCAVLGVPLLNVGLGHNLLESLLFGFGSSVGFTFALVLFAGIRERLEGA
DVPQPFRGTAIAMITAGFMSLAFMGFAGLDRFH

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4657

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787914, Length=192, Percent_Identity=67.1875, Blast_Score=268, Evalue=2e-73,
Organism=Escherichia coli, GI1787919, Length=169, Percent_Identity=33.7278106508876, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR011293 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 20623; Mature: 20492

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYLFVVIGAVLVNNVVFVRILGLCPFMGVSKKLETAIGMGAATTFVLTLGAGSSYLID
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHEEECCCCHHHHH
HYLLVPADLGYLRTLAFIVVIAAIVQLTELVIQKTSPLLHQVLGIYLPLITTNCAVLGVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLNVGLGHNLLESLLFGFGSSVGFTFALVLFAGIRERLEGADVPQPFRGTAIAMITAGFM
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
SLAFMGFAGLDRFH
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SSYLFVVIGAVLVNNVVFVRILGLCPFMGVSKKLETAIGMGAATTFVLTLGAGSSYLID
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHEEECCCCHHHHH
HYLLVPADLGYLRTLAFIVVIAAIVQLTELVIQKTSPLLHQVLGIYLPLITTNCAVLGVP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLNVGLGHNLLESLLFGFGSSVGFTFALVLFAGIRERLEGADVPQPFRGTAIAMITAGFM
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
SLAFMGFAGLDRFH
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA