| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119897485
Identifier: 119897485
GI number: 119897485
Start: 1286022
End: 1287257
Strand: Direct
Name: 119897485
Synonym: azo1194
Alternate gene names: NA
Gene position: 1286022-1287257 (Clockwise)
Preceding gene: 119897481
Following gene: 119897486
Centisome position: 29.39
GC content: 69.17
Gene sequence:
>1236_bases GTGCGCGCCTTGCGCCATCGCAACTTCCGCTTCTACTTCGGCGGCCAGGCCGTGTCCGTGCTTGGCTCCTGGATCCAGCA GGTGGCGCTGGCGTGGTTGATCTACCGGCTCACCGGCTCGGTCGCGCTGCTCGGCGTCACGGCCTTCGCCGCCTTGCTGC CGATGCTGATCGTCGGTCCGCTCGCGGGGGCGTGGATCGACCGCCGTGACAAGCGCCGGCTGTTGATCCTGGTGCAGGGT CTGCTGGCCGGCCAGGCCGCGCTGCTGGCGGTGCTGACCGCGCTCGACGCGATCGGGCCGACGCTGATCGTGGTGATGTC GGTGGTGCTCGGCGTGCTCAATGCCTTCGATACGCCGCTGCGCCAGGCGCAGATCAGCGTGTTCGTGGATGACCGCGCCG ACCTGCCGAACGCGCTCGCCTTGAACGCGATGGTGTTCAACTCGGGCCGCTTCATCGGCCCGCCGCTCGCCGGCCTCATC CTCGGGCTGACGTCCGAGGCGGTGTGCTTCGCGCTCAACGCGGTGTCGTTCGCGGCGCTCGCGTTCGGCGTGGCGATGAT CCGGGTCGAGGCGACGCCGCGCGCCAAGGGCTCGATGGGGGCGGTGTTCCGCGAGGGTCTCAAGTTCGTGTGGGACGTCT ACACCATCCGGATGCTGATCCTGACGCTGGCCACGGTGAACGTCACCGCGTCGAGCTATGCCGTGCTGCTGCCGGTGTTC GCCAAGGACGTGTTCGTGGGCGACGCGCGCATGCTGGGCTGGCTGTGGGGCGCGGCCGGCGCCGGCGCCTTCGTCGGCAC CATCTTCCTTGCGACGCGCAAGCACTTGCCCGGTCTGGTGCGCGTGATCCTGAGCGGCGCCAGCGCCAGCGCGCTGGCAA TGCTGGTGTTTTCCTACAATCGCGAGATGCCGGTGGCGCTGGCGGCGATGGCGGTGGTCGGGTTCGGCATTTCGGTCTGC AATGTCGCGATCAACATGCTGCTGCAAAGCCTCGCCCCGGATCATCTGCGCGGCCGCGTGGTGTCCTTCTTCAGCTCCAC CCGCTTCGGCTTTGATGCCATCGGCGGGCTGGTGGCGGGGCTGATCGCCGCGCAGATCGGTGTGCAGGCGGCGGTGCTGC TCGAAGGTGTGCTGCTGCTGGCTTTCATCGCCTGGGCCTGGCGACTGCGCGGGCGCTTGCATGGCGACATTGCCCTCCAT GCCGGCAGCGGGCACGCGCCCGCGACACCGCGCTAG
Upstream 100 bases:
>100_bases GCGGCGGCGCCCCGCGGGCGGGTTCCGCCCCCATCACGGAGTGTCCTTGAGTTCCTCGTCTTCCCCCGGGCCCTTGCCGC ACGGCGGCTGGCCGGCGCCC
Downstream 100 bases:
>100_bases CATTGCGGCGCGCGGGACGCCCCGGCGCGCCTTCTTCCATCCAGATTTTCGGAGTGTCCGCATGAAGTACGGCGAATTCG ATTCCGCTTCCCTGATGTAC
Product: putative integral membrane efflux protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Facilitator Superfamily Permease; Permeases Of Facilitator Superfamily; Permease; Facilitator Superfamily Transporter; Multidrug ABC Transporter; MFS Family Transporter Protein; Transporter Facilitator Family; Arabinose Efflux Permease; Transmembrane Efflux Protein; Transporter-Like Membrane Protein; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Drug Resistance Efflux Protein
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRALRHRNFRFYFGGQAVSVLGSWIQQVALAWLIYRLTGSVALLGVTAFAALLPMLIVGPLAGAWIDRRDKRRLLILVQG LLAGQAALLAVLTALDAIGPTLIVVMSVVLGVLNAFDTPLRQAQISVFVDDRADLPNALALNAMVFNSGRFIGPPLAGLI LGLTSEAVCFALNAVSFAALAFGVAMIRVEATPRAKGSMGAVFREGLKFVWDVYTIRMLILTLATVNVTASSYAVLLPVF AKDVFVGDARMLGWLWGAAGAGAFVGTIFLATRKHLPGLVRVILSGASASALAMLVFSYNREMPVALAAMAVVGFGISVC NVAINMLLQSLAPDHLRGRVVSFFSSTRFGFDAIGGLVAGLIAAQIGVQAAVLLEGVLLLAFIAWAWRLRGRLHGDIALH AGSGHAPATPR
Sequences:
>Translated_411_residues MRALRHRNFRFYFGGQAVSVLGSWIQQVALAWLIYRLTGSVALLGVTAFAALLPMLIVGPLAGAWIDRRDKRRLLILVQG LLAGQAALLAVLTALDAIGPTLIVVMSVVLGVLNAFDTPLRQAQISVFVDDRADLPNALALNAMVFNSGRFIGPPLAGLI LGLTSEAVCFALNAVSFAALAFGVAMIRVEATPRAKGSMGAVFREGLKFVWDVYTIRMLILTLATVNVTASSYAVLLPVF AKDVFVGDARMLGWLWGAAGAGAFVGTIFLATRKHLPGLVRVILSGASASALAMLVFSYNREMPVALAAMAVVGFGISVC NVAINMLLQSLAPDHLRGRVVSFFSSTRFGFDAIGGLVAGLIAAQIGVQAAVLLEGVLLLAFIAWAWRLRGRLHGDIALH AGSGHAPATPR >Mature_411_residues MRALRHRNFRFYFGGQAVSVLGSWIQQVALAWLIYRLTGSVALLGVTAFAALLPMLIVGPLAGAWIDRRDKRRLLILVQG LLAGQAALLAVLTALDAIGPTLIVVMSVVLGVLNAFDTPLRQAQISVFVDDRADLPNALALNAMVFNSGRFIGPPLAGLI LGLTSEAVCFALNAVSFAALAFGVAMIRVEATPRAKGSMGAVFREGLKFVWDVYTIRMLILTLATVNVTASSYAVLLPVF AKDVFVGDARMLGWLWGAAGAGAFVGTIFLATRKHLPGLVRVILSGASASALAMLVFSYNREMPVALAAMAVVGFGISVC NVAINMLLQSLAPDHLRGRVVSFFSSTRFGFDAIGGLVAGLIAAQIGVQAAVLLEGVLLLAFIAWAWRLRGRLHGDIALH AGSGHAPATPR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43427; Mature: 43427
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALRHRNFRFYFGGQAVSVLGSWIQQVALAWLIYRLTGSVALLGVTAFAALLPMLIVGP CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LAGAWIDRRDKRRLLILVQGLLAGQAALLAVLTALDAIGPTLIVVMSVVLGVLNAFDTPL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH RQAQISVFVDDRADLPNALALNAMVFNSGRFIGPPLAGLILGLTSEAVCFALNAVSFAAL HHCEEEEEECCCCCCCCHHEEHEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHH AFGVAMIRVEATPRAKGSMGAVFREGLKFVWDVYTIRMLILTLATVNVTASSYAVLLPVF HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AKDVFVGDARMLGWLWGAAGAGAFVGTIFLATRKHLPGLVRVILSGASASALAMLVFSYN HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCC REMPVALAAMAVVGFGISVCNVAINMLLQSLAPDHLRGRVVSFFSSTRFGFDAIGGLVAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LIAAQIGVQAAVLLEGVLLLAFIAWAWRLRGRLHGDIALHAGSGHAPATPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MRALRHRNFRFYFGGQAVSVLGSWIQQVALAWLIYRLTGSVALLGVTAFAALLPMLIVGP CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LAGAWIDRRDKRRLLILVQGLLAGQAALLAVLTALDAIGPTLIVVMSVVLGVLNAFDTPL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCH RQAQISVFVDDRADLPNALALNAMVFNSGRFIGPPLAGLILGLTSEAVCFALNAVSFAAL HHCEEEEEECCCCCCCCHHEEHEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHH AFGVAMIRVEATPRAKGSMGAVFREGLKFVWDVYTIRMLILTLATVNVTASSYAVLLPVF HHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AKDVFVGDARMLGWLWGAAGAGAFVGTIFLATRKHLPGLVRVILSGASASALAMLVFSYN HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCC REMPVALAAMAVVGFGISVCNVAINMLLQSLAPDHLRGRVVSFFSSTRFGFDAIGGLVAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH LIAAQIGVQAAVLLEGVLLLAFIAWAWRLRGRLHGDIALHAGSGHAPATPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA