| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is argD [H]
Identifier: 119897486
GI number: 119897486
Start: 1287319
End: 1288497
Strand: Direct
Name: argD [H]
Synonym: azo1195
Alternate gene names: 119897486
Gene position: 1287319-1288497 (Clockwise)
Preceding gene: 119897485
Following gene: 119897492
Centisome position: 29.42
GC content: 68.53
Gene sequence:
>1179_bases ATGAAGTACGGCGAATTCGATTCCGCTTCCCTGATGTACATCACCAACCGGCCGGAGATCCTGTTCGAGCGCGGCGAAGG CTCCTGGCTGTACGACGCCCAGGGCAAGGCCTATCTCGACTTCGTGCAGGGCTGGGCGGTGAACTGTCTCGGCCATTCGC CCGCCGAGGTGCGCGACGCGATCGTCGCCCAGGCGGGCAAGCTGATCAATCCGAGCCCGGCCTTCTACAACGGCCCGATG ATCGAACTCGCCGGCCTGCTGACCGCGCACTGTTCGCTCGACCGTGTGTTCTTCGCCAACACCGGCGCCGAGGCCAACGA AGGCGCGATCAAGCTGGCGCGCAAGTGGGGTCGCCTGCATCGCAACGGCGCCTATCAGATCATCACCTTCGAGCATTCCT TCCACGGCCGCACGCTGGCGACCATGTCGGCGTCCGGCAAGGCGGGCTGGGACACGCTGTTCGCGCCGCAGGTACCGGGC TTCCCCAAGGCCAGGCTCAACGATCTCGAATCGGTGAAGGCGCTGATCGGCCCGGAAACCGTGGCGGTGATGCTGGAGCC GGTGCAGGGCGAGGGCGGCGTGATTCCCGCTGCACCGGAATTCCTGCAGGCGCTGCGCGCGCTCACCCGCGAGCACGGCA TCCTGCTGATCGTCGATGAAGTGCAATCCGGCATGGGCCGCACCGGCCGCCTGTTCGCGCACCAGCACGCCGGCATCGAG CCGGACATCATGACCCTGGGCAAGGGCATTGGCGGCGGCGTGCCACTGTCGGCGCTGCTGGCGACCGAGGCGGTGAGCTG CTTCGAGGCGGGCGACCAGGGTGGCACCTACAACGGCAACCCGTTGATGACGGCGGCCGGCATTGCCGTGATGCGCCGCC TGACCGCGCCCGGCTTCCTCGACGAGGTGCTGGCGCGCGGCGACTACCTGGCGGCGCGGCTGCGCGAACTGGTGGCCAAG CGCCATCTGGTCGGCGAGCGTGGCTCGGGCCTGCTGCGCGCCTTGGTGCTCGACAGCGACCGCGCTCCGGCCATCGTCAA GGCGGCGCTTGAAGGTGCCCCCACCGGCCTGCTGCTGAACGCCCCCCGGCCCAACCTGCTGCGCTTCATGCCGTCGCTGA CGGTGAGCGAGGCGGAGATCGACCAGATGGTGGAGATGCTGGACGCGCTGCTGGGCTGA
Upstream 100 bases:
>100_bases CATGCCGGCAGCGGGCACGCGCCCGCGACACCGCGCTAGCATTGCGGCGCGCGGGACGCCCCGGCGCGCCTTCTTCCATC CAGATTTTCGGAGTGTCCGC
Downstream 100 bases:
>100_bases CGTGCTTCGTCACCCGACGGCGGTGTGGTTTGCCCCCTCCCCTTCAAGGGGAGGGCCGGGGTGGGGATGGGGTCGGCCGC GGCGCCGACTTAACCCCATC
Product: acetylornithine transaminase protein
Products: NA
Alternate protein names: ACOAT [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKYGEFDSASLMYITNRPEILFERGEGSWLYDAQGKAYLDFVQGWAVNCLGHSPAEVRDAIVAQAGKLINPSPAFYNGPM IELAGLLTAHCSLDRVFFANTGAEANEGAIKLARKWGRLHRNGAYQIITFEHSFHGRTLATMSASGKAGWDTLFAPQVPG FPKARLNDLESVKALIGPETVAVMLEPVQGEGGVIPAAPEFLQALRALTREHGILLIVDEVQSGMGRTGRLFAHQHAGIE PDIMTLGKGIGGGVPLSALLATEAVSCFEAGDQGGTYNGNPLMTAAGIAVMRRLTAPGFLDEVLARGDYLAARLRELVAK RHLVGERGSGLLRALVLDSDRAPAIVKAALEGAPTGLLLNAPRPNLLRFMPSLTVSEAEIDQMVEMLDALLG
Sequences:
>Translated_392_residues MKYGEFDSASLMYITNRPEILFERGEGSWLYDAQGKAYLDFVQGWAVNCLGHSPAEVRDAIVAQAGKLINPSPAFYNGPM IELAGLLTAHCSLDRVFFANTGAEANEGAIKLARKWGRLHRNGAYQIITFEHSFHGRTLATMSASGKAGWDTLFAPQVPG FPKARLNDLESVKALIGPETVAVMLEPVQGEGGVIPAAPEFLQALRALTREHGILLIVDEVQSGMGRTGRLFAHQHAGIE PDIMTLGKGIGGGVPLSALLATEAVSCFEAGDQGGTYNGNPLMTAAGIAVMRRLTAPGFLDEVLARGDYLAARLRELVAK RHLVGERGSGLLRALVLDSDRAPAIVKAALEGAPTGLLLNAPRPNLLRFMPSLTVSEAEIDQMVEMLDALLG >Mature_392_residues MKYGEFDSASLMYITNRPEILFERGEGSWLYDAQGKAYLDFVQGWAVNCLGHSPAEVRDAIVAQAGKLINPSPAFYNGPM IELAGLLTAHCSLDRVFFANTGAEANEGAIKLARKWGRLHRNGAYQIITFEHSFHGRTLATMSASGKAGWDTLFAPQVPG FPKARLNDLESVKALIGPETVAVMLEPVQGEGGVIPAAPEFLQALRALTREHGILLIVDEVQSGMGRTGRLFAHQHAGIE PDIMTLGKGIGGGVPLSALLATEAVSCFEAGDQGGTYNGNPLMTAAGIAVMRRLTAPGFLDEVLARGDYLAARLRELVAK RHLVGERGSGLLRALVLDSDRAPAIVKAALEGAPTGLLLNAPRPNLLRFMPSLTVSEAEIDQMVEMLDALLG
Specific function: Catalyzes The Transmination Of N(2)-Succinylornithine And Alpha-Ketoglutarate Into N(2)-Succinylglutamate Semialdehyde And Glutamate. Can Also Act As A Acetylornithine Aminotransferase. [C]
COG id: COG4992
COG function: function code E; Ornithine/acetylornithine aminotransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=379, Percent_Identity=34.0369393139842, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI284507298, Length=298, Percent_Identity=34.8993288590604, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI13994255, Length=425, Percent_Identity=27.7647058823529, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI24119277, Length=407, Percent_Identity=29.7297297297297, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI37574042, Length=409, Percent_Identity=29.5843520782396, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI226442705, Length=409, Percent_Identity=29.0953545232274, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI226442709, Length=383, Percent_Identity=29.7650130548303, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI188536080, Length=430, Percent_Identity=23.7209302325581, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI38679950, Length=430, Percent_Identity=23.7209302325581, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI38679946, Length=430, Percent_Identity=23.7209302325581, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1788044, Length=361, Percent_Identity=45.1523545706371, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1789759, Length=367, Percent_Identity=40.0544959128065, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1789016, Length=398, Percent_Identity=33.1658291457286, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI145693181, Length=328, Percent_Identity=35.3658536585366, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1786349, Length=309, Percent_Identity=35.2750809061489, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1787560, Length=405, Percent_Identity=32.8395061728395, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786991, Length=342, Percent_Identity=33.0409356725146, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI25144271, Length=374, Percent_Identity=33.9572192513369, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI25144274, Length=273, Percent_Identity=34.0659340659341, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71992977, Length=437, Percent_Identity=30.2059496567506, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI32564660, Length=427, Percent_Identity=27.6346604215457, Blast_Score=145, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17541228, Length=439, Percent_Identity=27.5626423690205, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71981843, Length=159, Percent_Identity=32.7044025157233, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324432, Length=385, Percent_Identity=34.2857142857143, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6323470, Length=390, Percent_Identity=34.8717948717949, Blast_Score=205, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6321456, Length=419, Percent_Identity=24.8210023866348, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324386, Length=274, Percent_Identity=26.6423357664234, Blast_Score=83, Evalue=6e-17, Organism=Drosophila melanogaster, GI21357415, Length=374, Percent_Identity=33.6898395721925, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI28574759, Length=427, Percent_Identity=27.1662763466042, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI161085790, Length=428, Percent_Identity=27.1028037383178, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI21356575, Length=430, Percent_Identity=27.2093023255814, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI281366494, Length=429, Percent_Identity=24.2424242424242, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24667139, Length=429, Percent_Identity=24.2424242424242, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24667143, Length=429, Percent_Identity=24.2424242424242, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004636 - InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.11 [H]
Molecular weight: Translated: 41879; Mature: 41879
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYGEFDSASLMYITNRPEILFERGEGSWLYDAQGKAYLDFVQGWAVNCLGHSPAEVRDA CCCCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCHHHHHHHCHHEEECCCCHHHHHHH IVAQAGKLINPSPAFYNGPMIELAGLLTAHCSLDRVFFANTGAEANEGAIKLARKWGRLH HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH RNGAYQIITFEHSFHGRTLATMSASGKAGWDTLFAPQVPGFPKARLNDLESVKALIGPET CCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE VAVMLEPVQGEGGVIPAAPEFLQALRALTREHGILLIVDEVQSGMGRTGRLFAHQHAGIE EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCEEEEHHCCCCC PDIMTLGKGIGGGVPLSALLATEAVSCFEAGDQGGTYNGNPLMTAAGIAVMRRLTAPGFL CCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH DEVLARGDYLAARLRELVAKRHLVGERGSGLLRALVLDSDRAPAIVKAALEGAPTGLLLN HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEE APRPNLLRFMPSLTVSEAEIDQMVEMLDALLG CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MKYGEFDSASLMYITNRPEILFERGEGSWLYDAQGKAYLDFVQGWAVNCLGHSPAEVRDA CCCCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCHHHHHHHCHHEEECCCCHHHHHHH IVAQAGKLINPSPAFYNGPMIELAGLLTAHCSLDRVFFANTGAEANEGAIKLARKWGRLH HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH RNGAYQIITFEHSFHGRTLATMSASGKAGWDTLFAPQVPGFPKARLNDLESVKALIGPET CCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE VAVMLEPVQGEGGVIPAAPEFLQALRALTREHGILLIVDEVQSGMGRTGRLFAHQHAGIE EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCEEEEHHCCCCC PDIMTLGKGIGGGVPLSALLATEAVSCFEAGDQGGTYNGNPLMTAAGIAVMRRLTAPGFL CCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH DEVLARGDYLAARLRELVAKRHLVGERGSGLLRALVLDSDRAPAIVKAALEGAPTGLLLN HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEE APRPNLLRFMPSLTVSEAEIDQMVEMLDALLG CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]