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The map label for this gene is pqqE [H]

Identifier: 119897481

GI number: 119897481

Start: 1281902

End: 1283056

Strand: Direct

Name: pqqE [H]

Synonym: azo1190

Alternate gene names: 119897481

Gene position: 1281902-1283056 (Clockwise)

Preceding gene: 119897480

Following gene: 119897485

Centisome position: 29.29

GC content: 66.41

Gene sequence:

>1155_bases
ATGAACGCAGCGCAGCCACCTTCGCCGGCAAGCACCCTGGGTCCGCCGCTGTGGCTGCTGGCGGAGGTGACCTACCGCTG
CCCGCTGCACTGCGCCTTCTGCTACAACCCGGTCGATTTCGCCCGCGACGACACAGAGCTTTCCACCGAGGACTGGCTGC
GCGTGCTGCGCGAGGCGCGCGCCGCCGGCAGCGTGCAGTGCGGCTTCTCCGGCGGCGAGCCGCTGATGCGTGACGACCTC
GAAGTGCTGGTCGCCGAGGCCCACCGACTGGGCTACTACACCAACCTGCTCACCTCCGGCGTCGGCCTCACCGCCGAACG
CGCCCAGGCGCTGAAGGCGGCGGGGCTGGACCACATCCAGCTGTCCTTCCAGGACTCCACGCGCGAGCTCAACGACTTCC
TCTCGCACACCCGCACCTTCGATCTCAAGCAGCGCGTTGCCGGCATCATCAAGGACAATGGCTGGCCGATGGTGATGAAC
TGCGTGATCCACCGCCTCAACATCGACTACATCGACCGCATCATCGAGATGGCGGTCGAACTCGGCGCCGAATACCTCGA
ACTCGCCAACAGCCAGTACTACTCGTGGGCGCTGCTCAACCGCGACCAGCTGATGCCCTCGCGCGAGCAGCTCGAACGCG
CCGAGCGCATCACCAACGAATACCGCCAACGCCTCGGCGACCGCATCCGCATCTTCTTCGTGGTGCCCGACTACTACGAG
AAGCGCCCGAAGAAGTGCATGAACGGCTGGGGCAATGTCTTCCTCACCGTCACCCCGGACGGCACCGCCTTGCCTTGCCA
CACCGCGCGCATGCTGCCGGGGCTGGAATTCCCCAATGTGCGGGACATGGATGTGAAATCCATCTGGTACGACTCCGAAG
GCTTCAACCGCTACCGCGGCGACAGCTGGATGAAGGACCCGTGCCGGACCTGTCCCGACAAGGAAAAAGACCACGGCGGC
TGCCGCTGCCAGGCCTACATGCTGGCCGGCGATCCCGCCGCGGCCGATCCGGTGTGCGACAAGTCGCCGGATCACCACAA
GGTGGTGGAGGCGGTGGAGCGCGCCAACACGCCGGGCTGGAAGGGCGCCGAACAGCCGCTGATCTTCCGCGATCCGGCGC
GCTCGCGCGAGCTTGCGGCGTGTGGAAAGCGGTGA

Upstream 100 bases:

>100_bases
CTGGAGCAGGCTTTCGGCGCCAGCAACCTGGCGGCGGAGGTCGTCGCCTTCATCGACATGGCCCGCAAGCAGCAGTGGGT
CGAAGCACAGGACGCATGAC

Downstream 100 bases:

>100_bases
CGTCCGCTTCGCGCCGCCACCCTTGCCGGGGTAAGGCCGGGGCGGTGACGCATGCCGCGGCCACCGGCGCAGAATCCGCC
ACCCGCCACCGCCTTCGCGG

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNAAQPPSPASTLGPPLWLLAEVTYRCPLHCAFCYNPVDFARDDTELSTEDWLRVLREARAAGSVQCGFSGGEPLMRDDL
EVLVAEAHRLGYYTNLLTSGVGLTAERAQALKAAGLDHIQLSFQDSTRELNDFLSHTRTFDLKQRVAGIIKDNGWPMVMN
CVIHRLNIDYIDRIIEMAVELGAEYLELANSQYYSWALLNRDQLMPSREQLERAERITNEYRQRLGDRIRIFFVVPDYYE
KRPKKCMNGWGNVFLTVTPDGTALPCHTARMLPGLEFPNVRDMDVKSIWYDSEGFNRYRGDSWMKDPCRTCPDKEKDHGG
CRCQAYMLAGDPAAADPVCDKSPDHHKVVEAVERANTPGWKGAEQPLIFRDPARSRELAACGKR

Sequences:

>Translated_384_residues
MNAAQPPSPASTLGPPLWLLAEVTYRCPLHCAFCYNPVDFARDDTELSTEDWLRVLREARAAGSVQCGFSGGEPLMRDDL
EVLVAEAHRLGYYTNLLTSGVGLTAERAQALKAAGLDHIQLSFQDSTRELNDFLSHTRTFDLKQRVAGIIKDNGWPMVMN
CVIHRLNIDYIDRIIEMAVELGAEYLELANSQYYSWALLNRDQLMPSREQLERAERITNEYRQRLGDRIRIFFVVPDYYE
KRPKKCMNGWGNVFLTVTPDGTALPCHTARMLPGLEFPNVRDMDVKSIWYDSEGFNRYRGDSWMKDPCRTCPDKEKDHGG
CRCQAYMLAGDPAAADPVCDKSPDHHKVVEAVERANTPGWKGAEQPLIFRDPARSRELAACGKR
>Mature_384_residues
MNAAQPPSPASTLGPPLWLLAEVTYRCPLHCAFCYNPVDFARDDTELSTEDWLRVLREARAAGSVQCGFSGGEPLMRDDL
EVLVAEAHRLGYYTNLLTSGVGLTAERAQALKAAGLDHIQLSFQDSTRELNDFLSHTRTFDLKQRVAGIIKDNGWPMVMN
CVIHRLNIDYIDRIIEMAVELGAEYLELANSQYYSWALLNRDQLMPSREQLERAERITNEYRQRLGDRIRIFFVVPDYYE
KRPKKCMNGWGNVFLTVTPDGTALPCHTARMLPGLEFPNVRDMDVKSIWYDSEGFNRYRGDSWMKDPCRTCPDKEKDHGG
CRCQAYMLAGDPAAADPVCDKSPDHHKVVEAVERANTPGWKGAEQPLIFRDPARSRELAACGKR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43524; Mature: 43524

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAQPPSPASTLGPPLWLLAEVTYRCPLHCAFCYNPVDFARDDTELSTEDWLRVLREAR
CCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHH
AAGSVQCGFSGGEPLMRDDLEVLVAEAHRLGYYTNLLTSGVGLTAERAQALKAAGLDHIQ
HCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEE
LSFQDSTRELNDFLSHTRTFDLKQRVAGIIKDNGWPMVMNCVIHRLNIDYIDRIIEMAVE
EEECHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
LGAEYLELANSQYYSWALLNRDQLMPSREQLERAERITNEYRQRLGDRIRIFFVVPDYYE
HCHHHHHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH
KRPKKCMNGWGNVFLTVTPDGTALPCHTARMLPGLEFPNVRDMDVKSIWYDSEGFNRYRG
HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCCCC
DSWMKDPCRTCPDKEKDHGGCRCQAYMLAGDPAAADPVCDKSPDHHKVVEAVERANTPGW
CCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
KGAEQPLIFRDPARSRELAACGKR
CCCCCCEEEECCCCCCHHHHCCCC
>Mature Secondary Structure
MNAAQPPSPASTLGPPLWLLAEVTYRCPLHCAFCYNPVDFARDDTELSTEDWLRVLREAR
CCCCCCCCCHHHCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHH
AAGSVQCGFSGGEPLMRDDLEVLVAEAHRLGYYTNLLTSGVGLTAERAQALKAAGLDHIQ
HCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEE
LSFQDSTRELNDFLSHTRTFDLKQRVAGIIKDNGWPMVMNCVIHRLNIDYIDRIIEMAVE
EEECHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
LGAEYLELANSQYYSWALLNRDQLMPSREQLERAERITNEYRQRLGDRIRIFFVVPDYYE
HCHHHHHHHCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHH
KRPKKCMNGWGNVFLTVTPDGTALPCHTARMLPGLEFPNVRDMDVKSIWYDSEGFNRYRG
HHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCHHHEEECCCCCCCCCC
DSWMKDPCRTCPDKEKDHGGCRCQAYMLAGDPAAADPVCDKSPDHHKVVEAVERANTPGW
CCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
KGAEQPLIFRDPARSRELAACGKR
CCCCCCEEEECCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA