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The map label for this gene is pqqD [H]

Identifier: 119897480

GI number: 119897480

Start: 1281634

End: 1281900

Strand: Direct

Name: pqqD [H]

Synonym: azo1189

Alternate gene names: 119897480

Gene position: 1281634-1281900 (Clockwise)

Preceding gene: 119897479

Following gene: 119897481

Centisome position: 29.29

GC content: 68.16

Gene sequence:

>267_bases
ATGAACCAGCGCCCGCGCGTCTCGCGCCGCTTCCGCCTGCAGTGGGAAGACGCCCAGCAGGCCTGGGTGCTGCTCTACCC
GGAGGGCATGGTCAAGCTCAACCGCAGCGCGGGCGAAATCCTCGCGCGCTGCAACGGCGAGCGCACGCTGGCCGAAGTGG
TGCAGGATCTGGAGCAGGCTTTCGGCGCCAGCAACCTGGCGGCGGAGGTCGTCGCCTTCATCGACATGGCCCGCAAGCAG
CAGTGGGTCGAAGCACAGGACGCATGA

Upstream 100 bases:

>100_bases
CCCCTTCGAACCAGGAGTCTCGGCTGCGCCTCGCCGCTTCGCCGGCGGCAAGCAGCGCTTGCCGAAACCCCGGCCACGCC
TCCTTGAAGGGGGAGGAACG

Downstream 100 bases:

>100_bases
CATGAACGCAGCGCAGCCACCTTCGCCGGCAAGCACCCTGGGTCCGCCGCTGTGGCTGCTGGCGGAGGTGACCTACCGCT
GCCCGCTGCACTGCGCCTTC

Product: PqqD protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNQRPRVSRRFRLQWEDAQQAWVLLYPEGMVKLNRSAGEILARCNGERTLAEVVQDLEQAFGASNLAAEVVAFIDMARKQ
QWVEAQDA

Sequences:

>Translated_88_residues
MNQRPRVSRRFRLQWEDAQQAWVLLYPEGMVKLNRSAGEILARCNGERTLAEVVQDLEQAFGASNLAAEVVAFIDMARKQ
QWVEAQDA
>Mature_88_residues
MNQRPRVSRRFRLQWEDAQQAWVLLYPEGMVKLNRSAGEILARCNGERTLAEVVQDLEQAFGASNLAAEVVAFIDMARKQ
QWVEAQDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 10077; Mature: 10077

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRPRVSRRFRLQWEDAQQAWVLLYPEGMVKLNRSAGEILARCNGERTLAEVVQDLEQA
CCCCCCCCHHEECCCCCCCCEEEEECCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHH
FGASNLAAEVVAFIDMARKQQWVEAQDA
CCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQRPRVSRRFRLQWEDAQQAWVLLYPEGMVKLNRSAGEILARCNGERTLAEVVQDLEQA
CCCCCCCCHHEECCCCCCCCEEEEECCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHH
FGASNLAAEVVAFIDMARKQQWVEAQDA
CCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA