Click here to switch to the map view.

The map label for this gene is algZ [H]

Identifier: 119897281

GI number: 119897281

Start: 1062841

End: 1063866

Strand: Direct

Name: algZ [H]

Synonym: azo0990

Alternate gene names: 119897281

Gene position: 1062841-1063866 (Clockwise)

Preceding gene: 119897274

Following gene: 119897282

Centisome position: 24.29

GC content: 66.37

Gene sequence:

>1026_bases
ATGAAAAGTATAAAACAAAAGCCCAACCCTCTCGCCGTGCCGGCGCTGCCGGACTTCCGCAACCTGGGCGTCGTCCTGCG
CGTACTGCTGGTGGTGAACCTGCTGGCGCTGCTGACCGCGCTGGTGCGGGTGGACAGCGTCGATGCCTTCGTCGCCGAAA
CGATGCTGACGGCGGCCCGGGTGGAACTGCCACTATTCGTGATCGTGCTGGTGCTGTACGCGGTCCACGCCCGGCTGGCG
GCCCTGCCGTCATCGCACGCACTGGGGCTTGTTTTCGGGCTGGTGCTGGCGGTCGTCGCGGCTGCGTTTCCGTTGCTGGC
AGGGCCGGGGGACAACCTCTTGCGCTGGTTGTTCTGGGGCGTGGCGGCGGGCGCGGGGGTGGTGTTCTACTTTGATTACC
GCAATCGCCGCTATTCGCCGGCGCTGACCGAGGCGCGTCTGCTCGCGCTTACGGCGCGCATCCGGCCGCATTTCCTGTTC
AACAGCCTGAACGGGGTGCTTGGCGTGATGAGGGCCGATCCGCGCCGCGCGGAGCGTGCACTGGAGGAACTGGCGGACCT
GTTCCGCGCGCTGATGCAGGACAATCGCGAACTGGTGCCGCTCGGCGACGAACTCGATCTGTGCGAGCGCTATGCAGACC
TCGAGAGCCTGCGCCTGGGCGACCGCCTGCAGGTGCGCTGGGAGATCGATCCCGAGGTGGCGCGCGAGCGCCTGATGCAG
GTGCGGGTGCCGCCGCTGCTGCTGCAGCCCCTGCTGGAAAATGCGGTGTATCACGGCATCGAACCGGCCGAGGGCGCCGG
TGAAGTGGTGGTGCGGGTATTGCGGCGCGGCGACGAACTCCATCTCGAGGTGGAGAATCCGGTCATCGAGGTGGAGCGCC
ACACCGCCGGCAACCGCATGGCGTTGGCCAATATCCGCGAGCGGCTGATGCTGTTTTTCGATCTGGAGGCGGGGCTGGAC
ATCGACAGCGACGACGTGCGCTATCGGGTGCGGATCCGTCTGCCTTACCGTCATGGTGCTACATGA

Upstream 100 bases:

>100_bases
GGTGTCTGTCATAATGTCCGTTGCTGAGGAAAAACCGGCCCGCCTGTGCCGGGGCCGCGTCTGTATGAGGCGGCAGGTCG
CCTTGGCGCCTGCGTAAACC

Downstream 100 bases:

>100_bases
ACGATACCTTGCGGGTTCTCATCGTCGATGACGAAACACCGGCGCGCACGCGCCTGCGCGATCTTCTGGGCGATATCGGC
GCAACCTGCCCGAACGTGGT

Product: putative alginate biosynthesis protein AlgZ/FimS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKSIKQKPNPLAVPALPDFRNLGVVLRVLLVVNLLALLTALVRVDSVDAFVAETMLTAARVELPLFVIVLVLYAVHARLA
ALPSSHALGLVFGLVLAVVAAAFPLLAGPGDNLLRWLFWGVAAGAGVVFYFDYRNRRYSPALTEARLLALTARIRPHFLF
NSLNGVLGVMRADPRRAERALEELADLFRALMQDNRELVPLGDELDLCERYADLESLRLGDRLQVRWEIDPEVARERLMQ
VRVPPLLLQPLLENAVYHGIEPAEGAGEVVVRVLRRGDELHLEVENPVIEVERHTAGNRMALANIRERLMLFFDLEAGLD
IDSDDVRYRVRIRLPYRHGAT

Sequences:

>Translated_341_residues
MKSIKQKPNPLAVPALPDFRNLGVVLRVLLVVNLLALLTALVRVDSVDAFVAETMLTAARVELPLFVIVLVLYAVHARLA
ALPSSHALGLVFGLVLAVVAAAFPLLAGPGDNLLRWLFWGVAAGAGVVFYFDYRNRRYSPALTEARLLALTARIRPHFLF
NSLNGVLGVMRADPRRAERALEELADLFRALMQDNRELVPLGDELDLCERYADLESLRLGDRLQVRWEIDPEVARERLMQ
VRVPPLLLQPLLENAVYHGIEPAEGAGEVVVRVLRRGDELHLEVENPVIEVERHTAGNRMALANIRERLMLFFDLEAGLD
IDSDDVRYRVRIRLPYRHGAT
>Mature_341_residues
MKSIKQKPNPLAVPALPDFRNLGVVLRVLLVVNLLALLTALVRVDSVDAFVAETMLTAARVELPLFVIVLVLYAVHARLA
ALPSSHALGLVFGLVLAVVAAAFPLLAGPGDNLLRWLFWGVAAGAGVVFYFDYRNRRYSPALTEARLLALTARIRPHFLF
NSLNGVLGVMRADPRRAERALEELADLFRALMQDNRELVPLGDELDLCERYADLESLRLGDRLQVRWEIDPEVARERLMQ
VRVPPLLLQPLLENAVYHGIEPAEGAGEVVVRVLRRGDELHLEVENPVIEVERHTAGNRMALANIRERLMLFFDLEAGLD
IDSDDVRYRVRIRLPYRHGAT

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788446, Length=205, Percent_Identity=31.219512195122, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1788723, Length=181, Percent_Identity=34.2541436464088, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR010559
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 38200; Mature: 38200

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKQKPNPLAVPALPDFRNLGVVLRVLLVVNLLALLTALVRVDSVDAFVAETMLTAAR
CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELPLFVIVLVLYAVHARLAALPSSHALGLVFGLVLAVVAAAFPLLAGPGDNLLRWLFWG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VAAGAGVVFYFDYRNRRYSPALTEARLLALTARIRPHFLFNSLNGVLGVMRADPRRAERA
HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LEELADLFRALMQDNRELVPLGDELDLCERYADLESLRLGDRLQVRWEIDPEVARERLMQ
HHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH
VRVPPLLLQPLLENAVYHGIEPAEGAGEVVVRVLRRGDELHLEVENPVIEVERHTAGNRM
HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCH
ALANIRERLMLFFDLEAGLDIDSDDVRYRVRIRLPYRHGAT
HHHHHHHHHEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKSIKQKPNPLAVPALPDFRNLGVVLRVLLVVNLLALLTALVRVDSVDAFVAETMLTAAR
CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELPLFVIVLVLYAVHARLAALPSSHALGLVFGLVLAVVAAAFPLLAGPGDNLLRWLFWG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VAAGAGVVFYFDYRNRRYSPALTEARLLALTARIRPHFLFNSLNGVLGVMRADPRRAERA
HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LEELADLFRALMQDNRELVPLGDELDLCERYADLESLRLGDRLQVRWEIDPEVARERLMQ
HHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH
VRVPPLLLQPLLENAVYHGIEPAEGAGEVVVRVLRRGDELHLEVENPVIEVERHTAGNRM
HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCH
ALANIRERLMLFFDLEAGLDIDSDDVRYRVRIRLPYRHGAT
HHHHHHHHHEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]