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The map label for this gene is ydhD [C]

Identifier: 119897274

GI number: 119897274

Start: 1056474

End: 1056797

Strand: Direct

Name: ydhD [C]

Synonym: azo0983

Alternate gene names: 119897274

Gene position: 1056474-1056797 (Clockwise)

Preceding gene: 119897273

Following gene: 119897281

Centisome position: 24.14

GC content: 62.35

Gene sequence:

>324_bases
ATGGACATCAAGGACGTCATCCGCGAGCAGGTCACCACCCACCCGGTTGCCCTGTACATGAAGGGTGTTCCGCAGGCCCC
GGCCTGTGGCTTCTCCGCCACCGCGGTGCAAATCCTGAAGGCCAGCGGCGTGAAGGACTTCTTCTCGGTGAATGTGCTCG
CCGACGACGCCGTTCGCCAGGGCATCAAGGAGTTCTCCAACTGGCCCACCATCCCCCAGCTCTACGTGAAGGGCGAGTTT
GTGGGCGGCGCCGACATCATGCGTGAGATGTACCAGAGCGGTGAGATCCAGCAACTGCTGAAGGACGCAGGCGTTACCGC
CTGA

Upstream 100 bases:

>100_bases
TGGGGCGTGACTGACCGCGCCTGTCCCGTATTGACGCTTGCCCCGGGCAGGCGCTAGACTTTTCCGACTGTTTTACTCAA
CTTTTTCGAGAGTCATAAGC

Downstream 100 bases:

>100_bases
TCCGACCGCGGCGCGGTGCACGCCGCGTCGTCAGGGGGTGGCAGGCGCCGTTCTGGCGCGCCACCCCATCCACGCCTTGC
GGCCCAGGTGGCGCGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDIKDVIREQVTTHPVALYMKGVPQAPACGFSATAVQILKASGVKDFFSVNVLADDAVRQGIKEFSNWPTIPQLYVKGEF
VGGADIMREMYQSGEIQQLLKDAGVTA

Sequences:

>Translated_107_residues
MDIKDVIREQVTTHPVALYMKGVPQAPACGFSATAVQILKASGVKDFFSVNVLADDAVRQGIKEFSNWPTIPQLYVKGEF
VGGADIMREMYQSGEIQQLLKDAGVTA
>Mature_107_residues
MDIKDVIREQVTTHPVALYMKGVPQAPACGFSATAVQILKASGVKDFFSVNVLADDAVRQGIKEFSNWPTIPQLYVKGEF
VGGADIMREMYQSGEIQQLLKDAGVTA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=97, Percent_Identity=50.5154639175258, Blast_Score=116, Evalue=4e-27,
Organism=Homo sapiens, GI95113651, Length=86, Percent_Identity=50, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787943, Length=98, Percent_Identity=51.0204081632653, Blast_Score=111, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17556042, Length=96, Percent_Identity=50, Blast_Score=102, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71988159, Length=92, Percent_Identity=48.9130434782609, Blast_Score=98, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71988153, Length=92, Percent_Identity=48.9130434782609, Blast_Score=98, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6325198, Length=104, Percent_Identity=48.0769230769231, Blast_Score=110, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=79, Percent_Identity=51.8987341772152, Blast_Score=91, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321022, Length=79, Percent_Identity=50.6329113924051, Blast_Score=89, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24642023, Length=97, Percent_Identity=48.4536082474227, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=37.3737373737374, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11648; Mature: 11648

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKDVIREQVTTHPVALYMKGVPQAPACGFSATAVQILKASGVKDFFSVNVLADDAVRQ
CCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GIKEFSNWPTIPQLYVKGEFVGGADIMREMYQSGEIQQLLKDAGVTA
HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MDIKDVIREQVTTHPVALYMKGVPQAPACGFSATAVQILKASGVKDFFSVNVLADDAVRQ
CCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GIKEFSNWPTIPQLYVKGEFVGGADIMREMYQSGEIQQLLKDAGVTA
HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]