| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is hemK [H]
Identifier: 119897273
GI number: 119897273
Start: 1055551
End: 1056387
Strand: Direct
Name: hemK [H]
Synonym: azo0982
Alternate gene names: 119897273
Gene position: 1055551-1056387 (Clockwise)
Preceding gene: 119897272
Following gene: 119897274
Centisome position: 24.12
GC content: 67.03
Gene sequence:
>837_bases GTGAGCCTGCCGCCGGATATCGCAGGCGCTTTGAGCTGGGCGCGCGAACGGATCGAGCAGGTCGATGCGCGCGTTCTGCT GCGATACGCGCTGGCATGCCCCGCGTCCCGCCTCGTCGCATGGCCGGAGCAACGCTTGAGTGCGGAGGAATGGGAGAACT TCTCCCGCCTGGTGGAGCGGCGGGTGGAAGGCGAGCCGGTCGCCTACCTCATCGGCGAACGCGAGTTCTACGGGCGCAGT TTTGCCGTGACGCCCGCTGTCCTGATCCCCCGCCCCGATACCGAGCTGCTGGTCGAGCTTGCGGTGGCGCATTTTTCCGC GCAGCAGCGCGTACGGGTGCTGGACCTTGGCACCGGCAGTGGCGCCCTCGCCATCACGCTGGCGCTGGAACTGGATGCGG CGGACGTGACCGCGCTGGACCGTTCTCGCGAGGCTTTATGGGTGGCGATGGCAAACGCGGCCCGGCTGGGCGCCAGTGTT TCCTTCGTGCAGAGCGACTGGTTCGACGCGCTGGGGGAAGAGCGCTTTCAGCTAATTGTCGCAAACCCCCCCTACATCGC GGCGGACGACGCTCATCTGGAAGAGGGCGATCTGAGATTCGAACCGCGTTCCGCGCTGGCTGCCGGCACGGCCGGGCTGG ATGATCTGAGCGAGATTGCGGCCGCTGCCCCGGCGCATCTCGAGGCCGGCGGCTGGCTTTTCCTGGAGCACGGCTACGAT CAGGCCATGTCGGTACGCGGTTTGCTTGCAGATGCCGGCTTCGCCGCCATTTCCTCCTGGAAGGATCTGGCAGGGATCGA GCGGGTTACCGGGGGGCGTTGGTTGGGGCGTGACTGA
Upstream 100 bases:
>100_bases AGCTCGACGCGGTCATGCAGGGCGAACTCGACGAACTGCTCGCGGCCCTCGTGCTGGAGCATCAGGCCGAGCAGCTCGCG GCACTCGCCGAGGAGGGGCT
Downstream 100 bases:
>100_bases CCGCGCCTGTCCCGTATTGACGCTTGCCCCGGGCAGGCGCTAGACTTTTCCGACTGTTTTACTCAACTTTTTCGAGAGTC ATAAGCATGGACATCAAGGA
Product: HemK protein
Products: NA
Alternate protein names: M.XfaHemK2P [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSLPPDIAGALSWARERIEQVDARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRS FAVTPAVLIPRPDTELLVELAVAHFSAQQRVRVLDLGTGSGALAITLALELDAADVTALDRSREALWVAMANAARLGASV SFVQSDWFDALGEERFQLIVANPPYIAADDAHLEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYD QAMSVRGLLADAGFAAISSWKDLAGIERVTGGRWLGRD
Sequences:
>Translated_278_residues MSLPPDIAGALSWARERIEQVDARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRS FAVTPAVLIPRPDTELLVELAVAHFSAQQRVRVLDLGTGSGALAITLALELDAADVTALDRSREALWVAMANAARLGASV SFVQSDWFDALGEERFQLIVANPPYIAADDAHLEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYD QAMSVRGLLADAGFAAISSWKDLAGIERVTGGRWLGRD >Mature_277_residues SLPPDIAGALSWARERIEQVDARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRSF AVTPAVLIPRPDTELLVELAVAHFSAQQRVRVLDLGTGSGALAITLALELDAADVTALDRSREALWVAMANAARLGASVS FVQSDWFDALGEERFQLIVANPPYIAADDAHLEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYDQ AMSVRGLLADAGFAAISSWKDLAGIERVTGGRWLGRD
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=238, Percent_Identity=31.5126050420168, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1787463, Length=271, Percent_Identity=41.6974169741697, Blast_Score=206, Evalue=1e-54, Organism=Escherichia coli, GI87082085, Length=194, Percent_Identity=36.5979381443299, Blast_Score=103, Evalue=2e-23, Organism=Drosophila melanogaster, GI24582226, Length=240, Percent_Identity=27.9166666666667, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30179; Mature: 30048
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPPDIAGALSWARERIEQVDARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCHHHHHHHHHHHHH RVEGEPVAYLIGEREFYGRSFAVTPAVLIPRPDTELLVELAVAHFSAQQRVRVLDLGTGS HCCCCCEEEEECCHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCC GALAITLALELDAADVTALDRSREALWVAMANAARLGASVSFVQSDWFDALGEERFQLIV CEEEEEEEEEECCCHHHHHHCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCEEEEEE ANPPYIAADDAHLEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYD CCCCEEECCCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHCCCCEECCCCEEEEECCCC QAMSVRGLLADAGFAAISSWKDLAGIERVTGGRWLGRD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLPPDIAGALSWARERIEQVDARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHCCHHHHHHHHHHHHH RVEGEPVAYLIGEREFYGRSFAVTPAVLIPRPDTELLVELAVAHFSAQQRVRVLDLGTGS HCCCCCEEEEECCHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCCC GALAITLALELDAADVTALDRSREALWVAMANAARLGASVSFVQSDWFDALGEERFQLIV CEEEEEEEEEECCCHHHHHHCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCEEEEEE ANPPYIAADDAHLEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYD CCCCEEECCCCCCCCCCCEECCHHHHHHCCCCHHHHHHHHHCCCCEECCCCEEEEECCCC QAMSVRGLLADAGFAAISSWKDLAGIERVTGGRWLGRD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]