| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yfgM [C]
Identifier: 119897220
GI number: 119897220
Start: 995426
End: 996070
Strand: Direct
Name: yfgM [C]
Synonym: azo0929
Alternate gene names: 119897220
Gene position: 995426-996070 (Clockwise)
Preceding gene: 119897219
Following gene: 119897221
Centisome position: 22.75
GC content: 69.3
Gene sequence:
>645_bases ATGGCGGTGTATGACCTCGAAGAGCAGGAACAGATCTCCGAGCTGAAGGCGTGGTGGGCGCGGTATGGCAAGCTGGTGAC CGCCCTGGCGGTGGCCGCCGCGGTGGCATCGGTGGCGTGGCAAGGCTGGCGCTGGTACCAGAACCGTCAGGCGGCCGAGG CCGGCGGCCTTTACTTCGCCGTCCAGCAGGCGGTGACCCAGCAGGACGCCCAAAAGGCGCGCGAACTGACCGGCCGGCTG ATCGACCAGTTCGGTGGAACGGTGTACGCGCAACTGGGTGCGCTGGTGTCCGCCGGGCTGCAGTTCTCCAAGGGTGATCT CGACAACGCGCGCGCGCCGCTGGAGTGGGCGGCGGGGCAGGGCAAGGACGAGAGCCTGCGCGATCTCGCCCGCCTGCGGC TTGCCGCCGTGCTGCTGCAGCAGGGCGCGCATGACCAGGCGTTGGCGCAACTGCAGCGCGAACCCGGCAAGGCATATCGT GCCCGGTTCGCCGACCTGCGCGGCGATGCGCTCGCGGCCCAGGGCAAGGCGGCGGATGCGCGTACGGCCTATCAGGCGGC TATCACCGCGCTGGAAGCAGAGGGCGACGAGGCGGCAATGCTGCGCGAGGTCGTCCGTGTCAAACTCGAATCGCTGGAAG CTTGA
Upstream 100 bases:
>100_bases GTGAAGCCGTTGCGCGGCCCTGGCGGCCAGCAGCGCGTGACTCTTGCTGCCCTGGCCGAAGCGGTGGGCGGCGTGCTGTA TTCCGACCAGGGAGATGACG
Downstream 100 bases:
>100_bases TCAATGAAAGTGCGCGCCCTGCGTATGCTGCCTGTGCTCGCCGCGGTTCTGCTGACCACGGCCTGCTCCTCGCTTAATCC CTTCGCGTCTTCGACGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MAVYDLEEQEQISELKAWWARYGKLVTALAVAAAVASVAWQGWRWYQNRQAAEAGGLYFAVQQAVTQQDAQKARELTGRL IDQFGGTVYAQLGALVSAGLQFSKGDLDNARAPLEWAAGQGKDESLRDLARLRLAAVLLQQGAHDQALAQLQREPGKAYR ARFADLRGDALAAQGKAADARTAYQAAITALEAEGDEAAMLREVVRVKLESLEA
Sequences:
>Translated_214_residues MAVYDLEEQEQISELKAWWARYGKLVTALAVAAAVASVAWQGWRWYQNRQAAEAGGLYFAVQQAVTQQDAQKARELTGRL IDQFGGTVYAQLGALVSAGLQFSKGDLDNARAPLEWAAGQGKDESLRDLARLRLAAVLLQQGAHDQALAQLQREPGKAYR ARFADLRGDALAAQGKAADARTAYQAAITALEAEGDEAAMLREVVRVKLESLEA >Mature_213_residues AVYDLEEQEQISELKAWWARYGKLVTALAVAAAVASVAWQGWRWYQNRQAAEAGGLYFAVQQAVTQQDAQKARELTGRLI DQFGGTVYAQLGALVSAGLQFSKGDLDNARAPLEWAAGQGKDESLRDLARLRLAAVLLQQGAHDQALAQLQREPGKAYRA RFADLRGDALAAQGKAADARTAYQAAITALEAEGDEAAMLREVVRVKLESLEA
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=215, Percent_Identity=32.093023255814, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 23231; Mature: 23100
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYDLEEQEQISELKAWWARYGKLVTALAVAAAVASVAWQGWRWYQNRQAAEAGGLYFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHH VQQAVTQQDAQKARELTGRLIDQFGGTVYAQLGALVSAGLQFSKGDLDNARAPLEWAAGQ HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC GKDESLRDLARLRLAAVLLQQGAHDQALAQLQREPGKAYRARFADLRGDALAAQGKAADA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCHH RTAYQAAITALEAEGDEAAMLREVVRVKLESLEA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVYDLEEQEQISELKAWWARYGKLVTALAVAAAVASVAWQGWRWYQNRQAAEAGGLYFA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHH VQQAVTQQDAQKARELTGRLIDQFGGTVYAQLGALVSAGLQFSKGDLDNARAPLEWAAGQ HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC GKDESLRDLARLRLAAVLLQQGAHDQALAQLQREPGKAYRARFADLRGDALAAQGKAADA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCHH RTAYQAAITALEAEGDEAAMLREVVRVKLESLEA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]