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The map label for this gene is rodZ [H]

Identifier: 119897217

GI number: 119897217

Start: 991948

End: 992856

Strand: Direct

Name: rodZ [H]

Synonym: azo0926

Alternate gene names: 119897217

Gene position: 991948-992856 (Clockwise)

Preceding gene: 119897216

Following gene: 119897218

Centisome position: 22.67

GC content: 73.6

Gene sequence:

>909_bases
GTGAGCAACGCCGATCCGATCAATCCGGCGCCCGAAGGTGTGCCGGCACCCGGCCAGCAGTTGCGCCTCGCGCGCGAGTC
GCGCGGCGAGTCGCGGGCCGAGGTGGCTCAGTCGCTGAAGCTGTCGCTGCGCCAGGTCGAGGCGCTCGAACAGGGCGATT
ACACGGCCCTGCCGGGGCCGGCCTTTGTGCGCGGCTTCATGCGCAACTATGCGCGGCACCTGGGGCTGGACCCGGCGCCG
CTGCTGGCCACACTGGACGGCGCCGAGGCCGGTGCCCCGGTGGAACTGGCCCTGGTCTCCAACGCCGCGGGCGAAATGCC
GCAAGGCGGCGCCGAGCGGCGCGCTTCCCGCCTCGGCGCGACGCTGGCGGTGATCCTCCTCTTCGCGGTGCTGGCCGGGT
GGTATTTCGACTGGTTCCGCACCGATCCGCCGCCGGGATTGAACTCCGACGTCGGCGAGACCGTTTTGCCTCCCGCCGGC
GACGTAGCGGTCGAGCCCGTGCCGACCGAGCCTGCGCCGGTTCCGGCGGGCGGCGCGCCCGCGCCCGTCGAGCAGCAACC
CGGCACCGGTTCCGCGCCCGCGCCCGCGCCCGCGCCTCCTGCGCCTGCGCCGGCCTCCGCGGCGCCCGCGTCCGCCCCGC
TCAGCGCCGCCGATGGCGGCGCCCAGCCGGCGACACCTCAGCTCCTGTTCCGCTTTGGCGGCGAGTCCTGGGTGGAGGTC
CGTGATGGCAGTGGTGCGGTGATCTACTCGGGGCTGGGGTCGACCGGCAGCACGCGTTCCGTGCAGGGGCGCCCGCCGTT
CGCGCTGGTGGTGGGTAATGCCAAGGATGTGCGGCTGGAATTCAACGGCCGCGAGATTGACCTGCAGCCGCATACGCGCG
TCGCGGTTGCCCGGCTCACGGTGCAATGA

Upstream 100 bases:

>100_bases
GCCTTGGCAACCGCGACGCCGAGGCGAGCTATGCGGCCCAATTGCGCAGCCGCTTTTCGAAGTCGCCTGAATTCCAGTTG
ATGTCGCAAGGTAAGTACGA

Downstream 100 bases:

>100_bases
TGGTGGAACAGGCTTTTCCCTTCGGCTCGCTGCCGCGCCGGCCGACGCGGCAGGTGCGCATCGGCGGCGTCTCGGTCGGC
TCCGCTGCGCCGGTCGTCGT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSNADPINPAPEGVPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGPAFVRGFMRNYARHLGLDPAP
LLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGATLAVILLFAVLAGWYFDWFRTDPPPGLNSDVGETVLPPAG
DVAVEPVPTEPAPVPAGGAPAPVEQQPGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQPATPQLLFRFGGESWVEV
RDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVRLEFNGREIDLQPHTRVAVARLTVQ

Sequences:

>Translated_302_residues
MSNADPINPAPEGVPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGPAFVRGFMRNYARHLGLDPAP
LLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGATLAVILLFAVLAGWYFDWFRTDPPPGLNSDVGETVLPPAG
DVAVEPVPTEPAPVPAGGAPAPVEQQPGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQPATPQLLFRFGGESWVEV
RDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVRLEFNGREIDLQPHTRVAVARLTVQ
>Mature_301_residues
SNADPINPAPEGVPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGPAFVRGFMRNYARHLGLDPAPL
LATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGATLAVILLFAVLAGWYFDWFRTDPPPGLNSDVGETVLPPAGD
VAVEPVPTEPAPVPAGGAPAPVEQQPGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQPATPQLLFRFGGESWVEVR
DGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVRLEFNGREIDLQPHTRVAVARLTVQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=323, Percent_Identity=27.8637770897833, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 30892; Mature: 30761

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNADPINPAPEGVPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGP
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AFVRGFMRNYARHLGLDPAPLLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGA
HHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TLAVILLFAVLAGWYFDWFRTDPPPGLNSDVGETVLPPAGDVAVEPVPTEPAPVPAGGAP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
APVEQQPGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQPATPQLLFRFGGESWVEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
RDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVRLEFNGREIDLQPHTRVAVARLT
ECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEECCCCCEEEEEEEE
VQ
CC
>Mature Secondary Structure 
SNADPINPAPEGVPAPGQQLRLARESRGESRAEVAQSLKLSLRQVEALEQGDYTALPGP
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
AFVRGFMRNYARHLGLDPAPLLATLDGAEAGAPVELALVSNAAGEMPQGGAERRASRLGA
HHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TLAVILLFAVLAGWYFDWFRTDPPPGLNSDVGETVLPPAGDVAVEPVPTEPAPVPAGGAP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
APVEQQPGTGSAPAPAPAPPAPAPASAAPASAPLSAADGGAQPATPQLLFRFGGESWVEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEE
RDGSGAVIYSGLGSTGSTRSVQGRPPFALVVGNAKDVRLEFNGREIDLQPHTRVAVARLT
ECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEECCCCCEEEEEEEE
VQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA