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The map label for this gene is pilF

Identifier: 119897216

GI number: 119897216

Start: 991136

End: 991951

Strand: Direct

Name: pilF

Synonym: azo0925

Alternate gene names: NA

Gene position: 991136-991951 (Clockwise)

Preceding gene: 119897215

Following gene: 119897217

Centisome position: 22.65

GC content: 68.63

Gene sequence:

>816_bases
ATGGCGCGTAAAGCCGCGTCCCTGCTGCTGATGATGCTCGCGCTCTCCGGGTGCGTGACGTCGACGACGCGCCCCGGCCC
GGCCGTGAGTTCCGGATCGGGCACCGGCGCGAGCCGGCCGTTGTCCGAGTTGCCACCTTCCAGCGAGGCCGAGTCGCGAG
CGAAAGTTCACGTCGATCTCGGCATTGCGTACTTCGATGTGGGCCGCAACGACGTGGCGCTGGATGAAGCCGCGATTGCG
CTGCACGAGAAGCCGGGCTACGCCCCCGCCTACCACCTGCGCGCCCTTGTTTACATGGCGATCGACGACGTCGCCGCGGC
GCGCGAGAACTTCCAGGCAGCGCTCTCGGCCGCGCCGGGCGATCCGGACTTCAACAACAGCTACGGTTGGTTCCTGTGCC
AGCAGGGGCGCGAGCAGGAAGGTCTGGAGCATCTCGCCCGCGCTGCCCGCAACCCGTATTACCGCTACCCCACGCGTCCG
TACAACAACGCCGGCCTGTGCCATCTCCGGCTGGGCCAGGATGCCGCGGCGGAGGCGCAGTTCGTCCGTGCGGTGCAGGC
CGATCCCCAGAACGGCGAGGCGCTGTTCCAGCTCGCCACGCTCGCCTACCGGCGCGGCGATCTGGAGGCCGCGCGCGGCC
ACCTCGTCCGGCTGCACCAGATGAAGGGGCCGACGGCCGCTTCGGCCTGGCTGGGGCTGCGAACCGAGCGCCGCCTTGGC
AACCGCGACGCCGAGGCGAGCTATGCGGCCCAATTGCGCAGCCGCTTTTCGAAGTCGCCTGAATTCCAGTTGATGTCGCA
AGGTAAGTACGAGTGA

Upstream 100 bases:

>100_bases
GTGGCGACGATGTCGATGCGGCCTGTGGCCAGCTGGCTGGTCAGGTGCAGGACAAGACCCGGCGCACCGTGCGCCTCAAG
CAGTCGATGGAGGTTCGCTG

Downstream 100 bases:

>100_bases
GCAACGCCGATCCGATCAATCCGGCGCCCGAAGGTGTGCCGGCACCCGGCCAGCAGTTGCGCCTCGCGCGCGAGTCGCGC
GGCGAGTCGCGGGCCGAGGT

Product: putative type 4 pilus biogenesis protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilF; TPR Repeat-Containing Protein; Fimbrial Biogenesis And Twitching Motility Protein; Type 4 Fimbrial Biogenesis Protein PilF; Pilus Assembly Protein; PilF Type IV Pilus Assembly Protein; Type IV Pili Biogenesis Protein PilF; Type IV Pilus Assembly Protein PilF; TPR Repeat-Containing Pilus Assembly Protein PilF; Type Iv Pilus Biogenesis/Stability Protein Pilw; Type IV Fimbrial Biogenesis Protein; Fimbrial Biogenesis Protein; Tfp Pilus Assembly Protein PilF; Protein Involved In Fimbrial Biogenesis; Type 4 Pilus Biogenesis Protein; Type IV Pilus Biogenesis Protein Pilf; Lipoprotein

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MARKAASLLLMMLALSGCVTSTTRPGPAVSSGSGTGASRPLSELPPSSEAESRAKVHVDLGIAYFDVGRNDVALDEAAIA
LHEKPGYAPAYHLRALVYMAIDDVAAARENFQAALSAAPGDPDFNNSYGWFLCQQGREQEGLEHLARAARNPYYRYPTRP
YNNAGLCHLRLGQDAAAEAQFVRAVQADPQNGEALFQLATLAYRRGDLEAARGHLVRLHQMKGPTAASAWLGLRTERRLG
NRDAEASYAAQLRSRFSKSPEFQLMSQGKYE

Sequences:

>Translated_271_residues
MARKAASLLLMMLALSGCVTSTTRPGPAVSSGSGTGASRPLSELPPSSEAESRAKVHVDLGIAYFDVGRNDVALDEAAIA
LHEKPGYAPAYHLRALVYMAIDDVAAARENFQAALSAAPGDPDFNNSYGWFLCQQGREQEGLEHLARAARNPYYRYPTRP
YNNAGLCHLRLGQDAAAEAQFVRAVQADPQNGEALFQLATLAYRRGDLEAARGHLVRLHQMKGPTAASAWLGLRTERRLG
NRDAEASYAAQLRSRFSKSPEFQLMSQGKYE
>Mature_270_residues
ARKAASLLLMMLALSGCVTSTTRPGPAVSSGSGTGASRPLSELPPSSEAESRAKVHVDLGIAYFDVGRNDVALDEAAIAL
HEKPGYAPAYHLRALVYMAIDDVAAARENFQAALSAAPGDPDFNNSYGWFLCQQGREQEGLEHLARAARNPYYRYPTRPY
NNAGLCHLRLGQDAAAEAQFVRAVQADPQNGEALFQLATLAYRRGDLEAARGHLVRLHQMKGPTAASAWLGLRTERRLGN
RDAEASYAAQLRSRFSKSPEFQLMSQGKYE

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29452; Mature: 29321

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKAASLLLMMLALSGCVTSTTRPGPAVSSGSGTGASRPLSELPPSSEAESRAKVHVDL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEE
GIAYFDVGRNDVALDEAAIALHEKPGYAPAYHLRALVYMAIDDVAAARENFQAALSAAPG
EEEEEECCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DPDFNNSYGWFLCQQGREQEGLEHLARAARNPYYRYPTRPYNNAGLCHLRLGQDAAAEAQ
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCHHHHHH
FVRAVQADPQNGEALFQLATLAYRRGDLEAARGHLVRLHQMKGPTAASAWLGLRTERRLG
HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHHCHHHHHCC
NRDAEASYAAQLRSRFSKSPEFQLMSQGKYE
CCCCHHHHHHHHHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
ARKAASLLLMMLALSGCVTSTTRPGPAVSSGSGTGASRPLSELPPSSEAESRAKVHVDL
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEE
GIAYFDVGRNDVALDEAAIALHEKPGYAPAYHLRALVYMAIDDVAAARENFQAALSAAPG
EEEEEECCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DPDFNNSYGWFLCQQGREQEGLEHLARAARNPYYRYPTRPYNNAGLCHLRLGQDAAAEAQ
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCHHHHHH
FVRAVQADPQNGEALFQLATLAYRRGDLEAARGHLVRLHQMKGPTAASAWLGLRTERRLG
HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHHCHHHHHCC
NRDAEASYAAQLRSRFSKSPEFQLMSQGKYE
CCCCHHHHHHHHHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA