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The map label for this gene is secF [H]

Identifier: 119897194

GI number: 119897194

Start: 966923

End: 967855

Strand: Reverse

Name: secF [H]

Synonym: azo0903

Alternate gene names: 119897194

Gene position: 967855-966923 (Counterclockwise)

Preceding gene: 119897195

Following gene: 119897191

Centisome position: 22.12

GC content: 63.67

Gene sequence:

>933_bases
ATGGAATTCTTCCGCATCAAGAAAGACATCCCGTTCATGCGCCACGCGCTGGTGTTCAACGTCATCTCGTTGATCACCTT
CCTGCTGGCCGTGTTCTTCCTTGCCACCCGTGGCCTGCACCTGTCGGTGGAATTCACCGGCGGCACGCTGGTCGAGGTCA
GCTACAGCGAAGCCGCCGAACTCGAGCCGATCCGCCAGTCGCTCGCGGCCGACGGCTACACCGACGTGCTGGTGCAGCAC
TTCGGCAGCACGCGCGACGTGCTGATCCGCCTGCCTAACAGGGAGGGCGCCGACAGCAAGGGGGTCGCCGAGCGCGTGAT
GGCCACGCTGGAAAAAAGCGCGGGACCCAAGGCCGAACTGCGCCGGGTCGAATTCGTCGGCCCGCAGGTCGGCAAGGAAC
TCGCCAGCGACGGTGCGATGGCGTTGCTGCTGGTCGTCGTCGGCATCGTGATCTACCTCGCGCTGCGCTTCGAATGGCGG
CTGGGGGTGGCGACGATCATCGCCAACCTGCACGACGTGATCATCATCCTGGGCTTCTTCGCCTTTTTCCAGTGGGAGTT
CTCGCTGGCCGTGCTGGCGGCGACGCTCGCCGTGCTCGGCTATTCGGTGAACGAATCGGTGGTGGTGTTCGACCGCGTGC
GCGAGACCTTCCGCAAGAAGCGCAATCTCAGCACCGAGCAGGTGGTGGATCACGCGATCACCAGCACGATCTCGCGCACC
ATGATCACCCACGGCAGCACCCAGATGATGGTGCTGTCGATGCTGATCTTCGGCGGCGAGACGCTGTTCTACTTCGCGCT
CGCGCTGACGATCGGCATCTGCTTCGGCATCTACTCCTCGGTGCTGGTCGCCAGCCCGCTGGCGATCTGGCTGGGCGTGT
CGCGCGAGCAGTTCGTCAAGCCGAAGAAGGAAAAGGAAGAGGCGGTGGTATAG

Upstream 100 bases:

>100_bases
TGATCTACGGCCGTCGCCGCAAGATCGACAAGCTTGCCATCGGCCAGGTGTGGAAGCCCGGCAACGTCGCCGGCAACTGA
GCGGACCCGAGGAACGCAAC

Downstream 100 bases:

>100_bases
CGCCACGGCCGGGGCGATGCTCCGGCCGCGCCAGAAAACAAGAAGGGCGCCGACGGCGCCCTTCTTGTTTTCCAACACTC
GCTGCGGAGCGGATCAGACC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MEFFRIKKDIPFMRHALVFNVISLITFLLAVFFLATRGLHLSVEFTGGTLVEVSYSEAAELEPIRQSLAADGYTDVLVQH
FGSTRDVLIRLPNREGADSKGVAERVMATLEKSAGPKAELRRVEFVGPQVGKELASDGAMALLLVVVGIVIYLALRFEWR
LGVATIIANLHDVIIILGFFAFFQWEFSLAVLAATLAVLGYSVNESVVVFDRVRETFRKKRNLSTEQVVDHAITSTISRT
MITHGSTQMMVLSMLIFGGETLFYFALALTIGICFGIYSSVLVASPLAIWLGVSREQFVKPKKEKEEAVV

Sequences:

>Translated_310_residues
MEFFRIKKDIPFMRHALVFNVISLITFLLAVFFLATRGLHLSVEFTGGTLVEVSYSEAAELEPIRQSLAADGYTDVLVQH
FGSTRDVLIRLPNREGADSKGVAERVMATLEKSAGPKAELRRVEFVGPQVGKELASDGAMALLLVVVGIVIYLALRFEWR
LGVATIIANLHDVIIILGFFAFFQWEFSLAVLAATLAVLGYSVNESVVVFDRVRETFRKKRNLSTEQVVDHAITSTISRT
MITHGSTQMMVLSMLIFGGETLFYFALALTIGICFGIYSSVLVASPLAIWLGVSREQFVKPKKEKEEAVV
>Mature_310_residues
MEFFRIKKDIPFMRHALVFNVISLITFLLAVFFLATRGLHLSVEFTGGTLVEVSYSEAAELEPIRQSLAADGYTDVLVQH
FGSTRDVLIRLPNREGADSKGVAERVMATLEKSAGPKAELRRVEFVGPQVGKELASDGAMALLLVVVGIVIYLALRFEWR
LGVATIIANLHDVIIILGFFAFFQWEFSLAVLAATLAVLGYSVNESVVVFDRVRETFRKKRNLSTEQVVDHAITSTISRT
MITHGSTQMMVLSMLIFGGETLFYFALALTIGICFGIYSSVLVASPLAIWLGVSREQFVKPKKEKEEAVV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=303, Percent_Identity=39.6039603960396, Blast_Score=241, Evalue=3e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34330; Mature: 34330

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFRIKKDIPFMRHALVFNVISLITFLLAVFFLATRGLHLSVEFTGGTLVEVSYSEAAE
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHHH
LEPIRQSLAADGYTDVLVQHFGSTRDVLIRLPNREGADSKGVAERVMATLEKSAGPKAEL
HHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
RRVEFVGPQVGKELASDGAMALLLVVVGIVIYLALRFEWRLGVATIIANLHDVIIILGFF
HHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFFQWEFSLAVLAATLAVLGYSVNESVVVFDRVRETFRKKRNLSTEQVVDHAITSTISRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MITHGSTQMMVLSMLIFGGETLFYFALALTIGICFGIYSSVLVASPLAIWLGVSREQFVK
HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PKKEKEEAVV
CCHHHHCCCC
>Mature Secondary Structure
MEFFRIKKDIPFMRHALVFNVISLITFLLAVFFLATRGLHLSVEFTGGTLVEVSYSEAAE
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHHH
LEPIRQSLAADGYTDVLVQHFGSTRDVLIRLPNREGADSKGVAERVMATLEKSAGPKAEL
HHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
RRVEFVGPQVGKELASDGAMALLLVVVGIVIYLALRFEWRLGVATIIANLHDVIIILGFF
HHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFFQWEFSLAVLAATLAVLGYSVNESVVVFDRVRETFRKKRNLSTEQVVDHAITSTISRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MITHGSTQMMVLSMLIFGGETLFYFALALTIGICFGIYSSVLVASPLAIWLGVSREQFVK
HHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PKKEKEEAVV
CCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]